GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:54:39

Sequence gi568815581f:16281908_16482594 : 200687 bp : 48.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4703   4901  199  0  1  -16   36   168 0.086  -0.39
 1.02 Intr +  17981  18071   91  2  1   68   95    71 0.109   5.80
 1.03 Intr +  31640  31707   68  1  2  112   64    51 0.221   2.80
 1.04 Intr +  34774  34805   32  1  2  129  116    -5 0.700   4.17
 1.05 Intr +  35868  36001  134  1  2  102  100   203 0.995  23.26
 1.06 Term +  43893  43991   99  2  0   94   48    81 0.979   2.83
 1.07 PlyA +  45896  45901    6                               1.05

 2.06 PlyA -  49510  49505    6                               1.05
 2.05 Term -  61034  60910  125  0  2   78   49   178 0.954  11.45
 2.04 Intr -  62804  62690  115  2  1   58  109    80 0.994   7.12
 2.03 Intr -  66778  66709   70  0  1   58   86    65 0.729   2.48
 2.02 Intr -  68122  68024   99  0  0   59   89    52 0.712   1.63
 2.01 Init -  71529  71120  410  0  2   94   70   552 0.984  50.03
 2.00 Prom -  77296  77257   40                              -3.86

 3.00 Prom +  92721  92760   40                              -4.66
 3.01 Init +  97175  97207   33  1  0  107   77    75 0.141   6.23
 3.02 Term +  99995 100690  696  1  0   67   31  1342 0.168 119.95
 3.03 PlyA + 100811 100816    6                               1.05

 4.04 PlyA - 101575 101570    6                               1.05
 4.03 Term - 109706 109588  119  0  2  105   47   168 0.962  13.10
 4.02 Intr - 123422 123372   51  0  0  108   63    20 0.287   0.38
 4.01 Init - 125186 125108   79  2  1   58   89    38 0.404   0.78
 4.00 Prom - 127685 127646   40                              -8.66

 5.00 Prom + 128767 128806   40                              -4.96
 5.01 Init + 132552 132555    4  2  1   97   68     0 0.276  -0.94
 5.02 Intr + 133865 133934   70  0  1  103   60    43 0.694   1.24
 5.03 Intr + 135794 135961  168  2  0   62   94   174 0.700  14.46
 5.04 Intr + 138208 138341  134  1  2   53   74   233 0.999  18.69
 5.05 Intr + 140692 140982  291  2  0  117  109   323 0.997  34.41
 5.06 Intr + 141562 141860  299  2  2   93   83   323 0.992  28.89
 5.07 Intr + 144192 144362  171  2  0   30  105   226 0.969  18.64
 5.08 Intr + 144815 144978  164  1  2   81   41   202 0.014  13.57
 5.09 Intr + 146910 147075  166  0  1   62  100   209 0.982  19.46
 5.10 Intr + 149877 149943   67  2  1   68   71    99 0.911   4.68
 5.11 Intr + 150059 150393  335  0  2   92   50   681 0.810  59.99
 5.12 Intr + 151667 151791  125  1  2  106  109   150 0.999  18.28
 5.13 Intr + 154324 154409   86  1  2   66   55   122 0.724   6.16
 5.14 Intr + 157420 157507   88  2  1   69  106    45 0.603   3.43
 5.15 Intr + 158278 158346   69  1  0   65   99    59 0.377   3.00
 5.16 Term + 159167 159173    7  2  1   97   54     0 0.337  -5.16
 5.17 PlyA + 159271 159276    6                               1.05

 6.04 PlyA - 159665 159660    6                              -0.45
 6.03 Term - 162224 161681  544  1  1  111   44   704 0.996  62.04
 6.02 Intr - 166053 165938  116  0  2   93  105   129 0.868  14.35
 6.01 Init - 166364 166362    3  2  0   91  101     0 0.846   1.60
 6.00 Prom - 170847 170808   40                              -4.86

 7.00 Prom + 172179 172218   40                              -5.66
 7.01 Init + 173226 173236   11  2  2   41   77    15 0.037  -4.89
 7.02 Term + 174054 174633  580  0  1   63   35   486 0.259  34.76
 7.03 PlyA + 176984 176989    6                               1.05

 8.04 PlyA - 178851 178846    6                              -0.45
 8.03 Term - 180479 180210  270  2  0  135   51   293 0.510  25.78
 8.02 Intr - 181700 181607   94  1  1   69   43    75 0.840   1.07
 8.01 Init - 182759 182698   62  2  2   57  100    64 0.883   5.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 100001 100690  690  1  0   82   31  1336 0.821 123.50
S.002 Term + 144815 144982  168  1  0   81   51   196 0.980  13.08
S.003 Init + 145581 145640   60  2  0   46  109   129 0.980  10.54
S.004 Term + 154882 154982  101  2  2   71   45    71 0.885  -0.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_1|207_aa
XRDFEFGAFSRGINTVFAKYTPGKESSGFYESHLKDWQELASSVVFLASKIVVSPQSQTR
NAIMLMRDFPDDPGMQWDTEHVARVLLQHIEVNGINLVVTFDAGGVSGHSNHIALYAAVR
ALHSEGKLPKGCSVLTLQSVNVLRKYISLLDLPLSLLHTQDVLFVLNSKEVAQAKKAMSC
HRSQLLWFRRLYIIFSRYMRINSLSFL

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_1|624_bp
nggcgggacttcgagtttggggccttttccagaggtattaacactgtgtttgctaaatac
accccagggaaggagtcgtcgggcttctacgagtcacacttaaaagactggcaagagttg
gcttcttctgttgtgttcttagcttccaaaatagtagtctctcctcagagccagacgcgc
aatgccatcatgttaatgagggatttcccagatgacccaggcatgcagtgggacacagag
cacgtggccagagtcctccttcagcacatagaagtgaatggcatcaatctggtggtgact
ttcgatgcagggggagtaagtggccacagcaatcacattgctctgtatgcagctgtgagg
gccctgcactcagaagggaagttacctaaagggtgctctgtgctcacgcttcagtctgtg
aatgtgctgcgcaagtacatctcccttctggatctgcccttgtctctgcttcatacgcag
gatgtcctcttcgtgctcaacagcaaagaagtggcacaggccaagaaagccatgtcctgc
caccgcagccagctcctctggttccgccgcctctacattatcttctcccggtacatgaga
atcaactcactgagcttcctctga

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_2|272_aa
MRRSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATRTRRSASQAGSKSQAVEKPPSEK
PRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPTPATPTSSASNLDLGEQRERWETFQK
RQKLTSEGAAKLLLDTFEYQGLVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNR
HFIVPASRFKLLKGAEHITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDE
GTVRSMVTEEFNGSDWEKAMKEHKTIKNMSKE

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_2|819_bp
atgcggcgatcgaggagctctgcggccgccaagctgcgcgggcagaagcggtccggggcc
tccgcggcccccgcggcctccgcggccgctgccttggcacccagcgccacccgcacacgg
cgctccgctagccaggccgggagcaagagccaggcggtggagaagccgccgtcggagaag
ccgcggctgaggcgctcgtcgccgcgggcccaggaggagggcccgggggagccgccgccg
cctgagctggcgttgctcccgccaccgccgccgccgccgccgactcccgcgaccccgacg
tcctcggcgtccaacctggacctgggcgagcagcgggagcgctgggagacgttccagaag
cggcagaagcttacctccgagggtgccgccaagctcctgctagacacctttgaataccag
ggcctggtgaagcacacaggaggctgccactgtggagcagttcgttttgaagtttgggcc
tcagcagacttgcatatatttgactgcaattgcagcatttgcaagaagaagcagaataga
cacttcattgttccagcttctcgcttcaagctcctgaagggagctgagcacataacgact
tacacgttcaatactcacaaagcccagcataccttctgtaagagatgtggcgttcagagc
ttctatactccacgatcaaaccccggaggcttcggaattgccccccactgcctggatgag
ggcactgtgcggagtatggtcactgaggaattcaatggcagcgattgggagaaggccatg
aaagagcacaagaccatcaagaacatgtctaaagagtga

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_3|242_aa
MGSSLASLGLVVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG
KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ
DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL
EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GC

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_3|729_bp
atgggctccagcctcgcctctctgggcctggtggtcaaaatgcagatcttcgtgaaaacc
cttaccggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaag
gccaagatccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggc
aagcagctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctg
cacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaag
accatcaccctggaagtggagcccagtgacaccatcgaaaatgtgaaggccaagatccag
gataaagaaggcatccctcccgaccagcagaggctcatctttgcaggcaagcagctggaa
gatggccgcactctttctgactacaacatccagaaggagtcgaccctgcacctggtcctg
cgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcactctg
gaggtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaagataaagaaggc
atcccccccgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcact
ctttctgactacaacatccagaaagagtcgaccctgcacctggtcctgcgcctgaggggt
ggctgttaa

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_4|82_aa
MQADGGTTAFPSGLEGGGRPGSALWSVYKTGEKGESKKLERNRSPAEERAAMLALHLPET
LGQFTFQSHIVTAEVEAQRDAS

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_4|249_bp
atgcaggcggacggcgggaccacagcatttccctccggcttggagggcggaggccgaccc
gggagcgcgctctggagcgtttataagacaggagaaaagggagaaagcaaaaagttggaa
agaaacagaagtcctgcagaagagcgggctgccatgctggctttgcatcttccagagacg
cttggccagttcaccttccagagccacatcgtcacggctgaagtagaagcccagagagat
gccagttga

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_5|747_aa
MAPATEKLRDPSSRHALASACGVSRLETLDGGQEDGSEADRGKLDFGSGLPPMESQFQGE
DRKFAPQIRVNLNYRKGTGASQPDPNRFDRDRLFNAVSRGVPEDLAGLPEYLSKTSKYLT
DSEYTEGSTGKTCLMKAVLNLKDGVNACILPLLQIDRDSGNPQPLVNAQCTDDYYRGHSA
LHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTKQWDVVS
YLLENPHQPASLQATDSQGNTVLHALVMISDNSAENIALVTSMYDGLLQAGARLCPTVQL
EDIRNLQDLTPLKLAAKEGKIEIFRHILQREFSGLSHLSRKFTEWCYGPVRVSLYDLASV
DSCEENSVLEIIAFHCKSPHRHRMVVLEPLNKLLQAKWDLLIPKFFLNFLCNLIYMFIFT
AVAYHQPTLKKARALFQALLTVVSQVLCFLAIEWYLPLLVSALVLGWLNLLYYTRGFQHT
GIYSVMIQKVILRDLLRFLLIYLVFLFGFAVALVSLSQEAWRPEAPTGPNATESVQPMEG
QEDEGNGAQYRGILEASLELFKFTIGMGELAFQEQLHFRGMVLLLLLAYVLLTYILLLNM
LIALMSETVNSVATDSWSIWKLQKAISVLEMENGYWWCRKKQRAGVMLTVGTKPDGSPDE
RWCFSPANVDKNHMQPTLHNASHYLEGRTAQNGGPHLPEPGVCEGRDPVPRPTVGVCKPE
RTGLQIREESASCLAAEYWSQEPAMRF

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_5|2244_bp
atggcccctgctactgagaagctccgggatcccagcagccgccacgccctggcctcagcc
tgcggggtaagtcggttggagacattagatggaggccaagaagatggctctgaggcggac
agaggaaagctggattttgggagcgggctgcctcccatggagtcacagttccagggcgag
gaccggaaattcgcccctcagataagagtcaacctcaactaccgaaagggaacaggtgcc
agtcagccggatccaaaccgatttgaccgagatcggctcttcaatgcggtctcccggggt
gtccccgaggatctggctggacttccagagtacctgagcaagaccagcaagtacctcacc
gactcggaatacacagagggctccacaggtaagacgtgcctgatgaaggctgtgctgaac
cttaaggacggagtcaatgcctgcattctgccactgctgcagatcgacagggactctggc
aatcctcagcccctggtaaatgcccagtgcacagatgactattaccgaggccacagcgct
ctgcacatcgccattgagaagaggagtctgcagtgtgtgaagctcctggtggagaatggg
gccaatgtgcatgcccgggcctgcggccgcttcttccagaagggccaagggacttgcttt
tatttcggtgagctacccctctctttggccgcttgcaccaagcagtgggatgtggtaagc
tacctcctggagaacccacaccagcccgccagcctgcaggccactgactcccagggcaac
acagtcctgcatgccctagtgatgatctcggacaactcagctgagaacattgcactggtg
accagcatgtatgatgggctcctccaagctggggcccgcctctgccctaccgtgcagctt
gaggacatccgcaacctgcaggatctcacgcctctgaagctggccgccaaggagggcaag
atcgagattttcaggcacatcctgcagcgggagttttcaggactgagccacctttcccga
aagttcaccgagtggtgctatgggcctgtccgggtgtcgctgtatgacctggcttctgtg
gacagctgtgaggagaactcagtgctggagatcattgcctttcattgcaagagcccgcac
cgacaccgaatggtcgttttggagcccctgaacaaactgctgcaggcgaaatgggatctg
ctcatccccaagttcttcttaaacttcctgtgtaatctgatctacatgttcatcttcacc
gctgttgcctaccatcagcctaccctgaagaaggcaagggccctgttccaggccctgctc
acagtggtgtcccaggtgctgtgtttcctggccatcgagtggtacctgcccctgcttgtg
tctgcgctggtgctgggctggctgaacctgctttactatacacgtggcttccagcacaca
ggcatctacagtgtcatgatccagaaggtcatcctgcgggacctgctgcgcttccttctg
atctacttagtcttccttttcggcttcgctgtagccctggtgagcctgagccaggaggct
tggcgccccgaagctcctacaggccccaatgccacagagtcagtgcagcccatggaggga
caggaggacgagggcaacggggcccagtacaggggtatcctggaagcctccttggagctc
ttcaaattcaccatcggcatgggcgagctggccttccaggagcagctgcacttccgcggc
atggtgctgctgctgctgctggcctacgtgctgctcacctacatcctgctgctcaacatg
ctcatcgccctcatgagcgagaccgtcaacagtgtcgccactgacagctggagcatctgg
aagctgcagaaagccatctctgtcctggagatggagaatggctattggtggtgcaggaag
aagcagcgggcaggtgtgatgctgaccgttggcactaagccagatggcagccccgatgag
cgctggtgcttcagtcctgctaatgtggacaaaaaccacatgcagcccacgctacacaat
gcctcccactacctggaaggccgcactgctcagaatggagggccacatctgccagagcct
ggagtctgcgaaggccgggacccggttccccggcccacagtgggggtgtgcaaacccgag
agaactgggttgcaaattcgtgaagaatcagcatcatgtttggcagctgagtattggagc
caggagcctgccatgaggttttga

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_6|220_aa
MEGDALGAMEKLCRQLTYHLSPHSQWRRHRGLVKRKPQACLKAVLAGSPPDNTVDLSGIP
LTSRDLERVTSYLQRCGEQVDSVELGFTGLTDDMVLQLLPALSTLPRLTTLALNGNRLTR
AVLRDLTDILKDPSKFPNVTWIDLGNNVDIFSLPQPFLLSLRKRSPKQGHLPTILELGEG
PGSGEEVREGTVGQEDPGGGPVAPAEDHHEGKETVAAAQT

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_6|663_bp
atggaaggcgatgcactgggcgccatggagaagctgtgccggcagctgacataccacctc
agcccccactcccagtggaggcggcaccgggggctggtgaaaaggaagccacaggcctgc
ctcaaggctgtcctggccggaagccccccagacaacacagtggacctgtcgggaatccca
ctgacctcccgagacctggagcgggtgaccagctacctacagcgctgtggggagcaggta
gacagcgtggagctgggcttcacaggcctcacggacgacatggtcctgcagctgctgcca
gcactcagcaccctgccccgcctcaccacactggcactcaatggcaaccggttgacccgg
gccgtgctgcgcgacctcactgacatccttaaggatcccagcaagttccccaatgtcacg
tggattgacctgggcaacaacgtggacatcttctccttgccccagcccttcctgctcagc
ctgcgcaagcgctccccaaagcagggccacctacccaccatcctggagctgggtgagggc
ccaggcagtggggaggaggtccgggaagggacagtaggccaggaggaccctggagggggc
cctgtggcacctgccgaagaccaccatgagggcaaggagactgtagctgcagctcagacg
tga

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_7|196_aa
MLARTPPGLPPAENRTRQHWPRSGAVRRWGTGGGRGGEGGRGRGRGGGGRGGGGGGVAVV
GGGGRGGRGGGRGGVGGGRGGRRRKRRRKRRKKRRKEEKKEEDQEEEEEEEEEEEKEEEE
EEEEKKEEEEEEKEEEEEEKEEEEEEKKEKEEEEEEEEEQKKEEEEEEEEEEKEKEEEEE
EEEEEEAGLDTETHIP

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_7|591_bp
atgttggccagaacccctccagggctccctcctgcagagaacaggactaggcagcactgg
cccagaagtggagcagtaagaaggtggggaacggggggagggagaggaggagaaggagga
agaggaagagggagaggaggaggaggaaggggagggggaggaggaggagtagcagtagta
ggaggaggaggaagaggagggagaggaggaggaagaggaggggtaggaggaggaagagga
ggaaggaggaggaagaggaggaggaagaggaggaagaagaggagaaaggaggagaagaag
gaagaggatcaggaagaggaggaggaggaagaggaggaggaagagaaggaagaggaggag
gaggaagaggagaagaaggaagaggaggaggaagagaaggaagaggaggaggaagagaag
gaagaggaggaggaagagaagaaggaaaaggaggaagaggaggaggaggaagaggagcag
aagaaggaagaggaggaggaagaggaagaagaggagaaggagaaagaagaggaggaggaa
gaggaagaggaggaggaagctggacttgacactgagacacacataccctaa

>gi568815581f:16281908_16482594|GENSCAN_predicted_peptide_8|141_aa
MAFDTFSIGSVVQEIENPCRRALDPSHLGWEPFSGLCWGSCGSPQNEDSLQWDLGMESTS
LDDVLYRYASFRNLVDPITHDLIISLARYIHCPKPVGWLWSEPARSRGVRWVPFWAEQLY
AQGGLADRPKEDKPVLQAPRA

>gi568815581f:16281908_16482594|GENSCAN_predicted_CDS_8|426_bp
atggcttttgacacattctcaattgggtctgtggtccaggagatcgagaacccctgcaga
agggcactggaccccagccacctgggctgggagcctttctctgggctgtgctggggcagc
tgtgggagcccccagaatgaggacagcctgcagtgggacctgggcatggagtcgacctcg
ctagacgacgttctgtatcgctacgccagcttccggaacctggtggaccccatcacacac
gacctcatcatcagcctggcacgctacatccactgtcccaagccggtagggtggctgtgg
tccgagccagccaggtcccggggtgtgcggtgggtgcctttctgggcagagcagctgtat
gcccaaggaggactggcagacaggcccaaggaggacaagcccgtcctccaggcaccaaga
gcttga