GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:52:45

Sequence gi568815586f:64355871_64601378 : 245508 bp : 41.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    738    752   15  2  0   72  111    14 0.665   2.39
 1.02 Intr +   6378   6490  113  2  2   58   96   106 0.751   6.66
 1.03 Intr +   7728   7815   88  0  1   30   44    83 0.119  -2.85
 1.04 Term +  19672  20028  357  0  0  -30   40   294 0.693   6.33
 1.05 PlyA +  20549  20554    6                               1.05

 2.03 PlyA -  21495  21490    6                               1.05
 2.02 Term -  24870  24853   18  0  0   88   50    45 0.103  -1.96
 2.01 Init -  34695  34444  252  0  0   89   93   367 0.506  34.69
 2.00 Prom -  35796  35757   40                             -11.44

 3.00 Prom +  36636  36675   40                              -9.05
 3.01 Init +  38485  38527   43  0  1   71   94   -13 0.204  -3.58
 3.02 Term +  40868  41130  263  0  2   15   54   387 0.305  22.70
 3.03 PlyA +  41161  41166    6                               1.05

 4.00 Prom +  43395  43434   40                              -7.15
 4.01 Init +  49065  49143   79  2  1   57   34   155 0.009   6.28
 4.02 Intr +  54092  54225  134  0  2   79  110    94 0.024  10.14
 4.03 Intr +  63006  63209  204  2  0   82    2   222 0.809  11.47
 4.04 Intr +  64200  64384  185  2  2   67   97    86 0.877   5.06
 4.05 Intr +  64483  64651  169  1  1   69   77   107 0.945   6.73
 4.06 Intr +  65365  65601  237  0  0   38  111   143 0.958   8.49
 4.07 Intr +  67312  67374   63  0  0   72   94    72 0.948   4.20
 4.08 Intr +  68729  68853  125  1  2   31   92   108 0.999   3.96
 4.09 Intr +  69168  69312  145  0  1   55   93   134 0.997   9.96
 4.10 Intr +  69945  70039   95  2  2   39  108    34 0.780  -1.66
 4.11 Intr +  72181  72250   70  1  1  113   95    21 0.782   3.57
 4.12 Intr +  74179  74417  239  0  2   55  115   215 0.998  16.39
 4.13 Intr +  75668  75953  286  2  1   48   81   243 0.996  16.02
 4.14 Intr +  77544  77733  190  2  1   56   81   151 0.389   9.44
 4.15 Intr +  78637  78753  117  2  0   72   78    66 0.900   3.52
 4.16 Intr +  78924  79039  116  1  2   51   99    63 0.871   2.95
 4.17 Intr +  83374  83445   72  0  0   48  110    57 0.741   2.58
 4.18 Intr +  87343  87475  133  0  1   30   94    60 0.330   0.10
 4.19 Intr +  96097  96317  221  2  2   -7  106   130 0.007   2.40
 4.20 Intr + 104319 104459  141  2  0   75  107    73 0.984   7.53
 4.21 Intr + 108464 108593  130  1  1   77   71    85 0.979   5.05
 4.22 Intr + 111031 111212  182  2  2   27  111   220 0.942  16.87
 4.23 Term + 113022 113216  195  2  0   95   45   158 0.983   8.63
 4.24 PlyA + 113780 113785    6                               1.05

 5.00 Prom + 114793 114832   40                              -3.55
 5.01 Init + 118369 118520  152  0  2   27   95    90 0.437   3.16
 5.02 Intr + 124142 124252  111  2  0   98  123    86 0.999  11.68
 5.03 Intr + 125972 126151  180  2  0   55  102    95 0.968   5.66
 5.04 Intr + 132617 132718  102  2  0   75   65    67 0.616   1.47
 5.05 Intr + 134171 134249   79  2  1   86   89    47 0.733   3.23
 5.06 Intr + 139613 139734  122  1  2   33   56   110 0.770   0.67
 5.07 Intr + 141079 141180  102  1  0   82  113    68 0.985   7.07
 5.08 Intr + 141293 141393  101  2  2   88   60    87 0.057   4.73
 5.09 Intr + 151304 151459  156  0  0   76   98    55 0.075   4.36
 5.10 Intr + 156166 156342  177  2  0   65   49   111 0.319   3.87
 5.11 Term + 162472 162632  161  2  2   23   49   166 0.220   3.32
 5.12 PlyA + 163894 163899    6                               1.05

 6.05 PlyA - 164492 164487    6                               1.05
 6.04 Term - 165163 165044  120  1  0   60   42   138 0.181   3.89
 6.03 Intr - 166122 166032   91  2  1   36   81    57 0.077  -1.12
 6.02 Intr - 177435 177180  256  1  1    7   84   177 0.176   4.78
 6.01 Init - 177528 177462   67  0  1  103   91    62 0.604   9.29
 6.00 Prom - 189693 189654   40                              -4.45

 7.00 Prom + 197410 197449   40                              -5.25
 7.01 Init + 200150 200242   93  1  0   46  100    77 0.285   5.13
 7.02 Intr + 201785 201898  114  1  0   83   40    84 0.487   2.82
 7.03 Term + 203106 203285  180  2  0   81   40   228 0.555  13.93
 7.04 PlyA + 205473 205478    6                               1.05

 8.02 PlyA - 205519 205514    6                               1.05
 8.01 Term - 211972 211755  218  2  2   34   41   190 0.149   5.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  54166  54225   60  0  0   82  110    75 0.918  10.40
S.002 Term -  96159  96044  116  1  2   10   55   146 0.814   1.25
S.003 Init + 100001 100087   87  1  0   98   96    18 0.935   4.30
S.004 Intr + 141293 141389   97  2  1   88   92    70 0.925   6.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_1|190_aa
MVTEQYFVIFGLRLALEGTVTGKWSRYRTQERVHGSGTRKNSGTYYVLNAVPPIDDHGNS
QSSHVQIFLRKKKFCKGDQSLEDEEHRGWPLEADNNKLRAIIKADPLTTTQKVLEELNIN
HSMVIQHLKQIRNVKKLDKCMSHELSENLKNIVLKCHLLLFYATTNSFSDWIVMCDEKWI
LYYNQRQPAQ

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_1|573_bp
atggttacagaacagtattttgtaatatttggcctaagacttgctttggaaggaactgtt
accggaaagtggtctcgatacagaacccaagagagggttcatggatcaggcacaagaaag
aattcaggcacctactatgttctcaatgccgtgccacctatagatgatcatgggaatagc
cagagtagtcacgtacaaatctttttgcggaaaaagaagttctgcaaaggagaccagagc
cttgaagatgaggagcatagaggctggccattggaagctgacaataacaaattaagagca
atcatcaaagctgatcctcttacaactacacaaaaagttttggaagaactcaacatcaac
cattctatggtcattcagcatctgaagcaaattagaaatgtgaaaaagcttgataaatgc
atgtctcatgagttgagcgaaaatttaaaaaatattgttctaaagtgtcatcttctctta
ttttatgcaacaacgaacagtttttctgattggattgtgatgtgcgatgaaaagtggatt
ttatactacaatcagcgacaaccagctcagtag

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_2|89_aa
MASPLPSGFPARRNSRLDVFLRRHLPPEVYDAVRAYEPCIVVSNSENHILKYVVLSDRLV
YLTENPPKSIRRVVALRDVVAIDLNTRDP

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_2|270_bp
atggccagccccttgccgtccggcttccccgcgcgcaggaacagccgcctggatgtgttc
ctgcggcggcatctgccgcccgaggtctacgacgcggtccgcgcctacgagccatgcatc
gtggtgtccaactctgagaaccacatcctcaagtatgtggtgctaagcgaccggctcgtc
tacctaaccgagaacccgcccaagtccatccggcgggtagtggctctgcgggacgtcgtg
gccattgacctgaacactcgagatccttag

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_3|101_aa
MVAHTCNPGTLGGPDPVWHGDQDGDAEDHCHPEKLSPLHPQVQLLREVPQELVHAPVPLL
QDVQISDIVTLDKCQSLNKTVYFNVLKVTKVADIKKQFQKF

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_3|306_bp
atggtggctcacacctgtaatcccggcactctgggaggcccagatcctgtatggcatggt
gaccaagatggagatgcagaggaccactgtcatccagagaaactatctccactacatccg
caagtacaattgcttcgagaagtaccacaagaacttgtccatgcacctgttcctctgctt
caggatgtccagatcagcgacattgtcacgttggataagtgccagtccctgaacaagacg
gtgtacttcaatgtgctcaaggtcaccaaggtcgcagacatcaagaagcaattccagaag
ttctga

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_4|1175_aa
MAVHPLAGRTGWGWVRAGAAAEERVPNVYKFFCGIRGHAYYNQKTTSITARMDEQALLGL
NPNADSDFRQRMLNPQPEKTFIRNKAAQVFALLFVTEYLTKWPKFFFDILSVVDLNPRGV
DLYLRILMAIDSELVDRDVEARRNTLIKDTMREQCIPNLVESWYQILQNYQFTNSEVTCQ
CLEVVGAYVSWIDLSLIANDRFINMLLGHMSIEVLREEACDCLFEVVNKGMDPVDKMKLV
ESLCQVLQSAGFFSIDQEEDVDFLARFSKLVNGMGQSLIVSWSKLIKNGDIKNAQEALQA
IETKVALMLQLLIHEDDDISSNIIGFCYDYLHILKQAIMLAVMKKLTYDEEYNFENEGED
EAMFVEYRKQLKLLLDRLAQVSPELLLASVRRVFSSTLQNWQTTRFMEVEVAIRLLYMLA
EALPVSHGAHFSGDVSKASALQDMMRTMAFLDHRGLRHSSAKVRSRTAYLFSRFVKSLNK
QMNPFIEDILNRIQDLLELSPPENGHQSLLSSDDQLFIYETAGVLIVNSEYPAERKQALM
RNLLTPLMEKFKILLEKLMLAQDEERQASLADCLNHAVGFASRTSKAFSNKQTVKQCGCS
EVYLDCLQTFLPALSCPLQKDILRSGVRTFLHRMIICLEEEVLPFIPSASEHMLKDCEAK
DLQEFIPLINQITAKFKIQVSPFLQQMFMPLLHAIFEVLLRPAEENDQSAALEKQMLRRS
YFAFLQTVTGSGMSEVIANQGAENVERVLVTVIQGAVEYPDPIAQKTCFIILSKLVELWG
GKDGPVGFADFVYKHIVPACFLAPLKQTFDLADAQTVLGPECVQYLQQEYLPSLQVAPEI
IQLPMCVIIHSYDLHQVPEHYYITLVWVLQKGKGPFIGGGSQTPKRDIPLITVAAEADSA
VAAAAVVTTRRAIGVRTRTRTGAPAVGHVASGQGLRSRKCPESRGGRGSPPAVARRRPGW
KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC
PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRDIKPGNIMRVIGEDG
QSVYKLTDFGAARELEDDEQFVSLYGTEEYLKRNSTTSPHTPRQFPPSLLAENLLHQSSL
LHQSEPYCISLASSPLQPVLLRAQDAYGVLWLSEL

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_4|3528_bp
atggcggtgcaccccctggctgggcggaccgggtgggggtgggtacgagccggggccgcc
gccgaggagcgcgtcccgaatgtttataaattcttctgtgggatcagagggcacgcctat
tacaaccagaaaactacaagtataacagcgaggatggatgaacaggctctattagggcta
aatccaaatgctgattcagactttagacaaaggatgctgaatccccaaccagagaagacc
tttatacgaaataaagccgcccaagtcttcgccttgctttttgttacagagtatctcact
aagtggcccaagtttttttttgacattctctcagtagtggacctaaatccaaggggagta
gatctctacctgcgaatcctcatggctattgattcagagttggtggatcgtgatgtggag
gctcgtaggaatactctcataaaagataccatgagggaacagtgcattccaaatctggtg
gaatcatggtaccaaatattacaaaattatcagtttactaattctgaagtgacgtgtcag
tgccttgaagtagttggggcttatgtctcttggatagacttatcccttatagccaatgat
aggtttataaatatgctgctaggtcatatgtcaatagaagttctacgggaagaagcatgt
gactgtttatttgaagttgtaaataaaggaatggaccctgttgataaaatgaaactagtg
gaatctttgtgtcaagtattacagtctgctgggtttttcagcattgaccaggaagaagat
gttgacttcctggccagattttctaagttggtaaatggaatgggacagtcattgatagtt
agttggagtaaattaattaagaatggggatattaagaatgctcaagaggcactacaagct
attgaaacaaaagtggcactgatgttgcagctactaattcatgaggatgatgatatttct
tctaatattattggattttgttacgattatcttcatattttgaaacaggcaatcatgttg
gccgttatgaaaaaattgacttacgatgaagaatataactttgaaaatgagggtgaagat
gaagccatgtttgtagaatatagaaaacaactgaagttactgttggacaggcttgctcaa
gtttcaccagagttactactggcctctgttcgcagagtttttagttctacactgcagaat
tggcagactacacggtttatggaagttgaagtagcaataagattgctgtatatgttggca
gaagctcttccagtatctcatggtgctcacttctcaggtgatgtttcaaaagctagtgct
ttgcaggatatgatgcgaactatggctttcttagatcacagaggtctgcggcattccagt
gcaaaagttcggagcaggacggcttacctgttttctagatttgtcaaatctctcaataag
caaatgaatcctttcattgaggatattttgaatagaatacaagatttattagagctttct
ccacctgagaatggccaccagtccttactgagcagcgatgatcaactttttatttatgag
acagctggagtgctgattgttaatagtgaatatccggcagaaaggaaacaagccttaatg
aggaatctgttgactccactaatggagaagtttaaaattctgttagaaaagttgatgctg
gcacaagatgaagaaaggcaagcctctctagcagactgtcttaaccatgctgttggattt
gcaagtcgaaccagtaaagctttcagcaacaaacagactgtgaaacaatgtggctgttcc
gaagtttatctggactgtttacagacattcttgccagccctcagttgtcccttacaaaag
gatattctcagaagtggagtccgtactttccttcatcgaatgattatttgcctggaggaa
gaagttcttccgttcattccatctgcttcagaacatatgctcaaagattgtgaagcaaaa
gatctccaggagttcattcctcttatcaaccagattacggccaaattcaagatacaggta
tccccgtttttacaacagatgttcatgcccctgcttcatgcaatttttgaagtgctgctc
cggccagcagaagaaaatgaccagtctgctgctttagagaagcagatgttgcggaggagt
tactttgctttcctgcaaacagtcacaggcagtgggatgagcgaagttatagcaaatcaa
ggtgcagagaatgtagaaagagtgttggttactgttatccaaggagcagttgaatatcca
gatccaattgcacagaaaacatgttttatcatcctctcaaagttggtagaactctgggga
ggtaaagatggaccagtgggatttgctgattttgtttataagcacattgtccccgcatgt
ttcctagcacctttaaaacaaacctttgacctggcagatgcacaaacagtattgggccca
gaatgtgttcagtatcttcaacaagaatacctgccctccttgcaagtagctccagaaata
attcagctccccatgtgtgttataattcactcttatgaccttcaccaagtccctgaacac
tactacatcaccctggtctgggtattgcagaagggtaagggccccttcataggtggtggc
agtcaaacaccaaagagagacatccccctcattaccgtggccgcggaagccgactcggca
gttgccgccgcggctgtggtgactaccagacgggccataggcgtgcgcacgcgcacccgc
accggcgcgccggccgtcggtcacgtggcctccggccagggcttgcgaagccggaagtgt
cctgagtctcgaggaggccgcgggagcccgccggcggtggcgcggcggagacccggctgg
aaaactggtgatttatttgctatcaaagtatttaataacataagcttccttcgtccagtg
gatgttcaaatgagagaatttgaagtgttgaaaaaactcaatcacaaaaatattgtcaaa
ttatttgctattgaagaggagacaacaacaagacataaagtacttattatggaattttgt
ccatgtgggagtttatacactgttttagaagaaccttctaatgcctatggactaccagaa
tctgaattcttaattgttttgcgagatgtggtgggtggaatgaatcatctacgagagaat
ggtatagtgcaccgtgatatcaagccaggaaatatcatgcgtgttataggggaagatgga
cagtctgtgtacaaactcacagattttggtgcagctagagaattagaagatgatgagcag
tttgtttctctgtatggcacagaagaatatttgaaaagaaactcaaccaccagtcctcat
actcctcggcagttccctccatctctgcttgctgagaacctactgcatcagtctagccta
ctgcatcagtctgaaccctactgcatcagtctagcctcctctcccctacaacctgtgttg
ttgagggcccaggatgcctatggggtcctctggctgtctgagttgtga

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_5|480_aa
MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS
GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS
DILHRMVIHVFSLQQMTAHKIYIHSYNTELIKDDYNETVHKKTEVVITLDFCIRNIEKTV
KVYEKLMKINLEAAELGEISDIHTKLLRLSSSQGTIETSLQDIDSRLSPGGSLADAWAHQ
EGTHPKDRKQKLYYHATKAMTHFTDECVKKYEAFLNKSEEWIRKMLHLRKQLLSLTNQCF
DIEEEVSKYQEYTNEVASHSGTLLVLAMAIRSDFHETFRRIARLFYWFPKSLTCSKNRKS
KLLWSQGGGKKRKEGGCLLDSTPLVSSIVWLSQGHLCRSEALRERTIMEELAEEHSSMDA
LVSCLLEDCIGSMVLTSAPVKARKLPVMVEGKEEDSVSHGKREQERQKEVPNSFKQPDLT

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_5|1443_bp
atgtatgagagagcagtgctaagaaaagatcatcagaagaaatatggagcaacagttgat
ctttggagcattggggtaacattttaccatgcagctactggatcactgccatttagaccc
tttgaagggcctcgtaggaataaagaagtgatgtataaaataattacaggaaagccttct
ggtgcaatatctggagtacagaaagcagaaaatggaccaattgactggagtggagacatg
cctgtttcttgcagtctttctcggggtcttcaggttctacttacccctgttcttgcaaac
atccttgaagcagatcaggaaaagtgttggggttttgaccagttttttgcagaaactagt
gatatacttcaccgaatggtaattcatgttttttcgctacaacaaatgacagctcataag
atttatattcatagctataatactgaattaattaaagatgattacaatgaaactgttcac
aaaaagacagaagttgtgatcacattggatttctgtatcagaaacattgaaaaaactgtg
aaagtatatgaaaagttgatgaagatcaacctggaagcggcagagttaggtgaaatttca
gacatacacaccaaattgttgagactttccagttctcagggaacaatagaaaccagtctt
caggatatcgacagcagattatctccaggtggatcactggcagacgcatgggcacatcaa
gaaggcactcatccgaaagacagaaagcaaaaactgtattaccatgccacaaaagctatg
acgcactttacagatgaatgtgttaaaaagtatgaggcatttttgaataagtcagaagaa
tggataagaaagatgcttcatcttaggaaacagttattatcgctgactaatcagtgtttt
gatattgaagaagaagtatcaaaatatcaagaatatactaatgaggtagcgagtcattct
ggaacactcctggttctcgctatggccataagaagtgactttcatgagaccttcagaaga
atagcccggctcttttactggttccccaaatcactgacctgctcaaagaatcggaaatcc
aagctgctctggagccaaggtggggggaagaagagaaaggaggggggctgcttattagac
agcaccccacttgtctccagcattgtatggctttctcaaggacacctatgtagatcagaa
gccctgagagagagaaccatcatggaagaactggcagaggaacactctagcatggatgct
ctggtgtcttgtctattggaggactgtataggaagcatggtgctgacatctgctcctgtg
aaggccaggaagcttccagtcatggtggaaggcaaagaagaagacagtgtatcacacggc
aagagggagcaagaaagacagaaggaagttccaaactcttttaaacaaccagatctcaca
tga

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_6|177_aa
MGTYSVQQPWWPQTIRSKGNLPVDFARELINRSSHLRARPCCAAEYRETADGNRLSRPGL
ADLRDSEPTREQALGLSSLPGFMYFSKWSPACSAALLTGTVKCSHLCLLPSPIEMNQPSQ
QKGCVPSIWEKGPQRVLKMTRQPFPAQCRKCGLVHSPSLSVDLFHQKATSGALRDAV

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_6|534_bp
atggggacttattctgtccagcagccctggtggcctcagaccatccgaagcaagggtaac
ctaccagttgattttgcccgagagcttataaatcgcagttcccatcttcgagcccggccc
tgctgtgcagcagagtacagagagacagctgatggtaacaggctgagccggccaggcctg
gctgacctgcgtgactcagagcccaccagggagcaggccctcggcctctcttcactccct
ggcttcatgtatttttccaagtggtcaccagcatgctcagcagctctgctcacagggacc
gtcaagtgttcacacctgtgtctactcccttctccaattgagatgaatcaaccaagccag
cagaagggctgtgttcccagcatttgggagaagggaccccagagggttctgaagatgacc
cgacaaccatttccagctcagtgccgtaaatgtggcttagtccattcaccttctctctct
gtagatctctttcatcagaaggctacatctggagcccttcgggatgctgtttag

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_7|128_aa
MSVMDKGEGAREREKPSHSNTELTPVKREGKIHLFFLRGTQHHRDISDLMHIPHPEDGTR
YLHGVASELLPSGPALWLQPDLASHTGDCGCLAPDTLEPHIPMDINESSSATVTSAIGAD
LRRRATTA

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_7|387_bp
atgtctgtgatggataaaggggagggagccagagaaagagaaaagccttcccacagcaac
acagagctgacacctgtgaagagagaggggaagatccatttattctttctacggggaaca
cagcaccacagagacatctctgatttaatgcatattcctcatcctgaagatggcactcga
tatttgcatggtgttgcctctgagctgctcccttcaggtccagccctctggctgcagcct
gaccttgctagtcatactggtgattgtggctgcctggctcctgacactctggagcctcat
attcccatggatattaatgagtccagctctgctactgtcacttctgccatcggcgctgac
ctgcggaggagggccaccactgcttag

>gi568815586f:64355871_64601378|GENSCAN_predicted_peptide_8|72_aa
XGTDVDTPQPSSARSAEAALVCGATSPRPVAPSVRLVRLLSGNRTLAVAVPKCIIQGMST
VVGNPKILVFML

>gi568815586f:64355871_64601378|GENSCAN_predicted_CDS_8|219_bp
ncagggacagatgtggacaccccacagcccagcagtgcacgctctgcagaggcagctctg
gtgtgtggagccacatctcccaggccagtagctccatcagtgcgacttgtgagactctta
tcagggaacaggacgttagcagttgcagttccaaagtgtattattcagggcatgtcaact
gtcgtagggaatcccaaaatcctagtcttcatgctgtag