GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:45:08

Sequence gi568815592f:47682067_47911731 : 229665 bp : 38.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    135    560  426  2  0   75  111   482 0.278  45.55
 1.02 Intr +   4926   4967   42  2  0  117   79    40 0.164   3.52
 1.03 Intr +   9768   9844   77  2  2   23   95    39 0.029  -4.51
 1.04 Intr +  11606  11682   77  2  2   91  105    46 0.071   4.84
 1.05 Intr +  25238  25272   35  0  2  109  106    20 0.651   2.92
 1.06 Intr +  26158  26212   55  0  1   49   95    45 0.764  -1.07
 1.07 Intr +  28669  28820  152  2  2  137   59    74 0.991   8.36
 1.08 Intr +  30291  30542  252  2  0   70   61   237 0.981  15.91
 1.09 Intr +  31732  33111 1380  0  0  101  111   888 0.975  80.59
 1.10 Intr +  35226  35285   60  2  0   80   99    40 0.703   2.31
 1.11 Intr +  54831  54965  135  2  0   51   53   127 0.016   5.34
 1.12 Intr +  75358  75455   98  0  2   63   83   121 0.281   6.99
 1.13 Intr +  86677  86735   59  1  2   63   92    42 0.050  -0.29
 1.14 Intr +  99978 100130  153  1  0   86   99    72 0.074   7.22
 1.15 Intr + 104449 104568  120  2  0   74   92    46 0.866   3.15
 1.16 Intr + 105941 106117  177  0  0   15   31   143 0.002   0.27
 1.17 Intr + 109742 109906  165  0  0   28  115   126 0.002   8.31
 1.18 Intr + 113163 113497  335  1  2   99  115   144 0.000  12.57
 1.19 Intr + 126088 126329  242  0  2   99   98   170 0.566  14.53
 1.20 Intr + 129608 129665   58  2  1   72   64    49 0.098  -1.13
 1.21 Intr + 135797 135927  131  1  2   86   92    56 0.074   4.37
 1.22 Intr + 141709 141827  119  1  2   13   68    72 0.023  -3.11
 1.23 Intr + 142211 142360  150  0  0   23  105   105 0.682   4.91
 1.24 Intr + 149923 149991   69  2  0   41   83    70 0.123   0.04
 1.25 Intr + 151745 151802   58  0  1   72   78    61 0.121   0.52
 1.26 Term + 158527 158635  109  1  1   42   35   137 0.442   0.80
 1.27 PlyA + 158758 158763    6                               1.05

 2.00 Prom + 162019 162058   40                              -2.45
 2.01 Init + 170143 170242  100  0  1  100   80    52 0.732   6.07
 2.02 Term + 170890 170981   92  2  2   72   41   122 0.912   2.80
 2.03 PlyA + 171317 171322    6                               1.05

 3.05 PlyA - 171899 171894    6                               1.05
 3.04 Term - 197870 196237 1634  0  2   54   55   667 0.333  48.94
 3.03 Intr - 210811 210602  210  2  0   83   69    50 0.014   0.56
 3.02 Intr - 221907 221832   76  0  1   65   81    34 0.211  -1.43
 3.01 Intr - 225764 225672   93  2  0   59   80    94 0.372   4.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100130  130  1  1   74   99    83 0.861   8.36
S.002 Term + 105941 106293  353  0  2   15   42   243 0.910   6.06
S.003 Init + 139273 139537  265  0  1   64   47   161 0.817   6.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:47682067_47911731|GENSCAN_predicted_peptide_1|1577_aa
MIVFHTLPKSVLVASLFSVGYGCPLAIAAITVAATEPGKGYLRPEICWLNWDMTKALLAF
VIPALAIVVVNLITVTLVIVKTQRAAIGNSMFQEVRAIVRISKNIAILTPLLGLTWGFGV
ATVIDDRSLAFHIIFSLLNAFQGFFILVFGTILDPKVEGHSSKDSLKCSGIENICLQQAS
LIMLLLNYLVIPSKAQVNKPGYIPNLGECSHYRSKIHLKAGDKLQSPEGKPKTGRIQEKC
EGPCISSSNCSQPCAKDFHGEIGFTCNQKKWQKSAETCTSLSVEKLFKDSTGASRLSVAA
PSIPLHILDFRAPETIESVAQGIRKNCPFDYACITDMVKSSETTSGNIAFIVELLKNIST
DLSDNVTREKMKSYSEVANHILDTAAISNWAFIPNKNASSDLLQSVNLFARQLHIHNNSE
NIVNELFIQTKGFHINHNTSEKSLNFSMSMNNTTEDILGMVQIPRQELRKLWPNASQAIS
IAFPTLGAILREAHLQNVSLPRQVNGLVLSVVLPERLQEIILTFEKINKTRNARAQCVGW
HSKKRRWDEKACQMMLDIRNEVKCRCNYTSVVMSFSILMSSKSMTDKVLDYITCIGLSVS
ILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNM
CVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVT
TVAITEPEKGYMRPEACWLNWDNTKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSS
KSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIFALLNAFQIRDALRMR
MSSLKGKSRAAEFNSRYNCLSDVIKLIHILPYVCVFEVVFKEILLYPQPVKMFPQIETER
EQEEELEMVNSIGADECGCRHWKKTPKDLRDTWADDCKSTLLPRAFAYKHPSWFENRMAL
NHTALPQDERLPHYLRDGDPFASKLSWEADLVAGFYLTIIGILSTFGNGYVLYMSSRRKK
KLRPAEIMTINLAVCDLGISAHSRCVLTQSLDGLGYLGRLYSVWTCINIMNAYGECTRTL
RRARHAWFCENKQDEPQGICKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTA
VSLDRYLKICYLSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLD
WWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVL
EMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIY
QVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRLWHQLSCGEN
SEMTASSETLGTKAHSPLQETREGENEAVGTSRKGTGQDAPAKRTLWVRGEAISVTMSIA
ILVLLVCVCVRTSLSSELGLVKAGLKSLIQGDQAVSLTGAATLPICNLICSIADDVLGRE
GRNKSASPNNLDADSHSNDDDCVSKTATKGGSDNGDLNGEILMQQQGAILKAESPHQTTE
PAGALILDFSTSRTVEK

>gi568815592f:47682067_47911731|GENSCAN_predicted_CDS_1|4734_bp
atgattgttttccataccttgcccaagtcagtcctggtggcatctctgttttcagtgggc
tatggatgccctttggccattgctgccatcactgttgctgccactgaacctggcaaaggc
tatctacgacctgagatctgctggctcaactgggacatgaccaaagccctcctggccttc
gtgatcccagctttggccatcgtggtagtaaacctgatcacagtcacactggtgattgtc
aagacccagcgagctgccattggcaattccatgttccaggaagtgagagccattgtgaga
atcagcaagaacatcgccatcctcacaccacttctgggactgacctggggatttggagta
gccactgtcatcgatgacagatccctggccttccacattatcttctccctgctcaatgca
ttccagggtttcttcatcctagtgtttggaaccatcctggatccaaaggttgagggtcat
tcatctaaagactccctgaagtgttctggcattgaaaatatttgtctccaacaagcatcc
ctgataatgcttcttctgaattatcttgtcatcccatcaaaggcccaagttaacaaacca
ggctacatccctaacctaggagaatgttcccactatagatccaagattcacctaaaagct
ggagataaacttcaaagccctgaagggaaacccaagactggaaggatccaagagaaatgc
gaaggaccttgtatttcttcttccaactgcagccagccctgtgctaaggactttcatgga
gaaataggatttacatgtaatcaaaaaaagtggcaaaaatcagctgaaacatgtacaagc
ctttctgtggaaaaactctttaaggactcaactggtgcatctcgcctttctgtagcagca
ccatctatacctctgcatattctagactttcgagctccagagaccattgagagtgtagct
caaggaatccgtaagaactgcccctttgattatgcctgcatcactgacatggtgaaatca
tcagaaacaacatctggaaatattgcatttatagtggagttattaaaaaatatttctaca
gacttgtctgataatgttactcgagagaaaatgaagagctatagtgaagtggccaaccac
atcctcgacacagcagccatttcaaactgggctttcattcccaacaaaaatgccagctcg
gatttgttgcagtcagtgaatttgtttgccagacaactccacatccacaataattctgag
aacattgtgaatgaactcttcattcagacaaaagggtttcacatcaaccataatacctca
gagaaaagcctcaatttctccatgagcatgaacaataccacagaagatatcttaggaatg
gtacagattcccaggcaagagctaaggaagctgtggccaaatgcatcccaagccattagc
atagctttcccaaccttgggggctatcctgagagaagcccacttgcaaaatgtgagtctt
cccagacaggtaaatggtctggtgctatcagtggttttaccagaaaggttgcaagaaatc
atactcaccttcgaaaagatcaataaaacccgcaatgccagagcccagtgtgttggctgg
cactccaagaaaaggagatgggatgagaaagcgtgccaaatgatgttggatatcaggaac
gaagtgaaatgccgctgtaactacaccagtgtggtgatgtctttttccattctcatgtcc
tccaaatcgatgaccgacaaagttctggactacatcacctgcattgggctcagcgtctca
atcctaagcttggttctttgcctgatcattgaagccacagtgtggtcccgggtggttgtg
acggagatatcatacatgcgtcacgtgtgcatcgtgaatatagcagtgtcccttctgact
gccaatgtgtggtttatcataggctctcactttaacattaaggcccaggactacaacatg
tgtgttgcagtgacatttttcagccactttttctacctctctctgtttttctggatgctc
ttcaaagcattgctcatcatttatggaatattggtcattttccgtaggatgatgaagtcc
cgaatgatggtcattggctttgccattggctatgggtgcccattgatcattgctgtcact
acagttgctatcacagagccagagaaaggctacatgagacctgaggcctgttggcttaac
tgggacaataccaaagcccttttagcatttgccatcccggcgttcgtcattgtggctgta
aatctgattgtggttttggttgttgctgtcaacactcagaggccctctattggcagttcc
aagtctcaggatgtggtcataattatgaggatcagcaaaaatgttgccatcctcactcca
ctgctgggactgacctggggttttggaatagccactctcatagaaggcacttccttgacg
ttccatataatttttgccttgctcaatgctttccagataagagatgctttgaggatgagg
atgtcttcactgaaggggaaatcgagggcagctgagtttaattctcgatacaactgccta
agtgatgtcatcaaattgatccacattttgccttatgtttgtgtttttgaagttgtgttt
aaagaaattcttctgtacccgcagcctgtaaagatgtttccccagattgagactgaaaga
gagcaggaagaggagttggaaatggtcaacagtattggagcagatgagtgtgggtgcaga
cactggaaaaagacaccaaaggacctgagggacacctgggcagatgattgtaagtcaacg
ctacttccccgggccttcgcatataaacatccctcgtggttcgagaacagaatggcgtta
aatcacactgccctgcctcaggacgagcgcctgccccattaccttcgagatggggatcct
tttgcttccaaactttcttgggaagcggatttagtggctggcttttacctaacaataatt
gggattctgtccacatttggaaatggatatgtcctttacatgtcttctagacgaaagaag
aagctgagacccgctgaaataatgactatcaatttagcagtctgtgatctggggatttca
gcacacagcagatgtgtgcttactcagagtttggatggtcttggttatctgggaaggctt
tattcagtatggacctgcataaacattatgaacgcttatggtgaatgcacacgcacatta
agaagagcaagacatgcctggttttgtgaaaataaacaggacgaaccccaggggatttgc
aagccgttcaccatcatctcttgcttttgtcaccgctgggtgtttggctggatcggctgc
cgctggtatggatgggctggatttttctttggctgtggaagccttatcaccatgactgct
gtcagcctggatcgatatttgaaaatctgctatttatcttatggggtttggctgaaaaga
aagcacgcctacatctgcctggcagccatctgggcctatgcttccttctggaccaccatg
cccttggtaggtctgggggactacgtacctgagcccttcggaacctcgtgcaccctggac
tggtggctggcccaggcctcggtagggggccaggttttcatcctgaacatcctcttcttc
tgcctcttgctcccaacggctgtgatcgtgttctcctacgtaaagatcattgccaaggtt
aagtcctcttccaaagaagtagctcatttcgacagtcggatccatagcagccatgtgctg
gaaatgaaactgacaaaggtagcgatgttgatttgtgctggattcctgattgcctggatt
ccttatgcagtggtgtctgtgtggtcagcttttggaaggccagactccattcccatacag
ctctctgtggtgccaaccctacttgcaaaatctgcagcgatgtacaatcccatcatttac
caagttattgattacaaatttgcctgttgccaaactggtggtttgaaagcaaccaagaag
aagtctctggaaggcttcaggctgcacaccgtaaccacagtcaggaagtcttctgctgtg
ctggaaattcatgaagaggacaaagggagattatggcatcagctatcttgtggggagaat
tctgagatgacagcctccagtgaaacactagggacaaaggcccattcacctcttcaagaa
accagggaaggggaaaatgaagctgttggaacatccaggaagggaacagggcaggatgca
cctgcaaagaggactctgtgggttcggggagaagccatctcagtgacaatgtccatcgca
atcctggttcttttggtgtgtgtgtgtgtaaggacttcactttcttctgaactggggctt
gtgaaagctggcctgaaaagcctgattcaaggagatcaggctgtgtctctgactggagca
gctacactccccatctgtaatttgatttgttctattgcagatgatgtactgggcagagag
ggcaggaacaaatctgctagtcccaataatctggatgcagacagtcatagtaatgatgat
gactgtgtctccaagactgctacaaaagggggaagtgacaatggagacttaaacggtgag
attttgatgcaacaacaaggtgccatcttgaaagcagagagccctcaccagacaactgaa
cctgctggtgccttgatcttggacttctcaacctctagaacagtggaaaaataa

>gi568815592f:47682067_47911731|GENSCAN_predicted_peptide_2|63_aa
MGKEKLFTGEMENDFWYLGQNTLEHTFYVLDAAAISLQLKFCDQFRASCFQSVTDEQEHV
QTG

>gi568815592f:47682067_47911731|GENSCAN_predicted_CDS_2|192_bp
atgggcaaggagaagctcttcacaggtgagatggaaaatgacttctggtatctaggacaa
aacactttagaacataccttttatgttttagatgcagcagcaatcagcctgcagctgaag
ttctgcgaccagttcagggcaagctgcttccagagtgtcactgatgagcaagagcatgtt
caaacaggataa

>gi568815592f:47682067_47911731|GENSCAN_predicted_peptide_3|670_aa
GILKAVCYLATGGIGSPGSLLNLCQQHRGTEEYASPEDITASFLPSFRPSSKSDLHGHSV
QKKIQLWNVFISSSLGRKATKHSGMPLKTCPLKHYAFIKHLCYSFEDFSLESYLVEIKAV
HNLSLQSHGTKGVFELLSGWRRTKENLPFKDRIADAYSDVMVTYTMTSSLYFITFGMGAS
PFTNIEAVKVFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLD
RKPVWFQTVMSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYAS
FSFMGCLQISDGANIINLLASDSPSVSYAMVQQKYFSNYSPVIGFYVYEPLEYWNSSVQD
DLRRLCSGFTAVSWVEQYYQFLKVSNVSANNKSDFISVLQSSFLKKPEFQHFRNDIIFSK
AGDESNIIASRLYLVARTSRDKQKEITEVLEKLRPLSLSKSIRFIVFNPSFVFMDHYSLS
VTVPVLIAGFGVLLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISIL
CLIYTLNFAIDHCAPLLFTFVLATEHTRTQCIKSSLQDHGTAILQNVTSFLIGLVPLLFV
PSNLTFTLFKCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEI
QENPDHVTTV

>gi568815592f:47682067_47911731|GENSCAN_predicted_CDS_3|2013_bp
gggattctgaaagctgtgtgctaccttgccacaggtggaattggaagtccaggctccctg
ctcaacctttgccagcagcacaggggaacagaggaatatgcttctcctgaagacattaca
gccagcttcctcccttctttcaggccatcttctaaaagtgatcttcatgggcattctgtt
cagaaaaaaatccagctgtggaatgtttttatttcatcttcattgggaagaaaggccaca
aaacattcagggatgccccttaaaacttgtcctttgaagcattatgcttttatcaagcat
ctgtgctacagctttgaagatttttctcttgaatcatatttagtagaaatcaaagctgtg
cataatctaagtttgcaaagtcatggaactaaaggagtgtttgagcttctgtccggatgg
cggagaaccaaagagaacttgcccttcaaagacaggatagcagatgcctattctgatgtg
atggtcacctataccatgaccagctccctgtacttcatcacttttggcatgggtgccagc
ccattcacaaacatagaggctgtgaaggtcttctgtcaaaacatgtgtgtctctattctg
ttgaactacttctacattttctccttctttggctcctgtctggtctttgctggccaacta
gagcaaaaccgctaccacagcatcttttgctgtaagatcccttctgcagaatacctggat
cgcaaacctgtgtggttccagacagtgatgagtgatgggcatcaacagacgtcccatcat
gagacgaacccctaccagcaccacttcattcagcacttcctccgtgaacattataatgaa
tggattaccaatatatatgtgaagccatttgttgtcatcctctatctcatttatgcctcc
ttctccttcatggggtgcttacagatcagtgacggagccaacatcatcaatctactagcc
agtgattcgccaagtgtttcctatgccatggttcagcagaaatatttcagcaactatagc
cctgtgataggattctacgtctatgagcccctagagtactggaacagcagcgtccaggat
gacctaagaagactctgtagtggattcactgcagtgtcctgggtggagcagtactaccag
ttcctgaaagtcagcaacgtcagtgccaataacaaaagtgacttcatcagtgtcctgcaa
agctcatttttaaaaaagccagaattccagcattttcgaaatgatatcatcttctccaag
gcaggggatgaaagcaatatcattgcttctcgcttgtatctggtggccaggactagcaga
gacaagcagaaagaaatcacagaagtgttggaaaagctgaggcccctatccctctcaaag
agcatccgattcatcgtgttcaacccctcctttgtcttcatggaccattacagcttgtct
gtcacagtgcctgttctgattgcaggctttggtgttctcctggtgttaatcctgactttt
ttcctagtgatccaccctctgggaaacttctggctaattcttagcgtcacctcaattgag
ctgggcgttctgggcttaatgacattatggaacgtcgacatggattgcatttctatcttg
tgccttatctacaccttgaatttcgccattgaccactgtgcaccactgcttttcacattt
gtattagcaactgagcacacccgaacacaatgtataaaaagctccttgcaagaccatggg
acagccattttgcaaaatgttacttcttttcttattgggttagtcccccttctatttgtg
ccttcgaacctgaccttcacactgttcaaatgcttgctgctcactgggggttgcacactt
ctgcactgttttgttattttacctgtgttcctaacgtttttccccccttccaaaaagcac
cacaagaaaaagaaacgtgccaagcgaaaggagagagaggaaattgaatgcatagaaatt
caagagaacccggatcacgtcaccacagtatga