GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:58:07

Sequence gi568815591r:80358674_80611926 : 253253 bp : 36.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6054   6142   89  1  2  115   55    88 0.903   5.04
 1.02 PlyA +   6945   6950    6                               1.05

 2.03 PlyA -   8394   8389    6                               1.05
 2.02 Term -  65015  64888  128  0  2   82   45    91 0.226   1.66
 2.01 Init -  75697  75334  364  1  1   60   72   282 0.240  20.86
 2.00 Prom -  93502  93463   40                              -2.25

 3.07 PlyA -  93510  93505    6                               1.05
 3.06 Term - 100188  99998  191  1  2   20   37   179 0.910   2.63
 3.05 Intr - 103639 103486  154  1  1   67   99    21 0.871  -0.18
 3.04 Intr - 103958 103829  130  1  1   42  103   150 0.513  11.68
 3.03 Intr - 115706 115578  129  1  0   67   80    88 0.920   4.79
 3.02 Intr - 120325 120168  158  1  2   62   83   190 0.830  13.79
 3.01 Init - 129903 129862   42  0  0   76   92     8 0.237   0.47
 3.00 Prom - 134370 134331   40                              -5.65

 4.03 PlyA - 134392 134387    6                               1.05
 4.02 Term - 135311 134917  395  0  2  -45   49   676 0.944  44.61
 4.01 Init - 153253 153136  118  1  1   68   59   130 0.958   8.51
 4.00 Prom - 158145 158106   40                              -3.35

 5.00 Prom + 164078 164117   40                              -6.75
 5.01 Init + 165554 165654  101  1  2   79   80    69 0.426   4.98
 5.02 Intr + 170260 170407  148  1  1   79   66    56 0.327   1.82
 5.03 Term + 170449 170679  231  0  0   42   50   220 0.516   9.09
 5.04 PlyA + 170919 170924    6                               1.05

 6.00 Prom + 181565 181604   40                              -3.55
 6.01 Init + 186226 186448  223  0  1   74   57   175 0.704  11.76
 6.02 Intr + 189695 189760   66  0  0   74  119    15 0.180   1.16
 6.03 Intr + 204982 205337  356  2  2   44   54   168 0.113   3.08
 6.04 Intr + 205944 206091  148  2  1   18   95   143 0.572   6.89
 6.05 Term + 216558 216721  164  1  2   76   48   111 0.137   3.02
 6.06 PlyA + 217362 217367    6                               1.05

 7.02 PlyA - 217469 217464    6                               1.05
 7.01 Term - 243696 243539  158  1  2   42   44   161 0.574   4.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_1|29_aa
XPQAQRVEPGAIEDYSQTLKPNGVYPVGF

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_1|90_bp
naacctcaggcccagagggtggagccaggagccatagaggattattcacagaccttgaaa
cctaatggagtttacccagttggattttga

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_2|163_aa
MAGAPPLLGPLHSTPCGREHQSESVQDLAGCAGCRHRNKLYAGPIARLGMSPQGECGSDH
ARVTVTLKPQKGVLRCSFSSAVHGWWCVSSSVGSLPQHMGQLPSTNEGKGLVWQPFWVPT
LDLPIVDIGSCLQQHYSQEPKSRSNANVYQLMNGSVKCGISIQ

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_2|492_bp
atggcaggggcacctcctctacttggccctctgcactcaaccccttgtgggagggagcat
cagagtgagtcagtccaggacctggctggctgtgcagggtgccgacacaggaacaagctc
tatgcagggcccatagccagactaggcatgtcgcctcaaggggaatgtggcagcgaccat
gcgagggtgactgtgaccctgaagccccagaaaggggtgttacggtgttcctttagttct
gctgtccatggatggtggtgtgttagcagctctgttggctctttgcctcagcacatgggg
cagctgccctccaccaatgagggcaaagggctggtgtggcagcctttctgggtacccaca
ctcgatttgcctattgtggatataggcagctgtttacaacagcattattcccaagagcca
aaaagtagaagcaatgcaaatgtctatcaactgatgaatggatcagtaaaatgtggcata
tccatacaatga

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_3|267_aa
MTTLGIDYVNPRSAEDQRQLYAMANTLEDGGMTPQLAEVIKRLWRDPGIQACFERASEYQ
LNDSAAYYLNDLDRITASGYVPNEQDVLHSRVKTTGIIETQFSFKDLHFRMFDVGGQRSE
RKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMHESLHLFNSICNHKYFSTTSIVLF
LNKKDIFQEKVTKVHLSICFPEYTGPNTFEDAGNYIKNQFLDLNLKKEDKEIYSHMTCAT
DTQNVKFVFDAVTDIIIKENLKDCGLF

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_3|804_bp
atgactacccttggaattgattatgtaaatcccagaagtgcagaggaccaacgacaactt
tatgcaatggcaaataccctggaagatggtggcatgacacctcaactggctgaggtaata
aaacggctgtggagagatccaggaattcaggcctgctttgaaagggcatctgaatatcag
ctcaatgactcagcagcttactaccttaatgatttagatagaataacagcatctgggtat
gtgccaaatgaacaagatgttctccattctcgagtgaaaacgactggaatcattgaaact
caattctcctttaaagacttgcacttcaggatgtttgatgtaggtggacagagatctgag
agaaagaagtggattcactgctttgaaggagttacatgcattatattttgtgctgcactt
agtgcctatgacatggtcctcgtggaagacgaagaagtgaatagaatgcatgaaagcctt
cacctgttcaacagtatctgtaatcacaagtatttttcaacaacctccattgtcctgttc
ctcaacaaaaaagatatctttcaagaaaaggtaaccaaggtgcatcttagtatctgcttt
ccagaatacactgggccaaatacatttgaagatgcaggaaactacatcaagaaccagttt
ctagacctgaatttaaaaaaagaagataaggaaatttattcccacatgacctgtgctact
gacacccaaaatgtcaagtttgtgtttgacgcagttacagatataataatcaaagagaat
ctaaaagactgtgggcttttctaa

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_4|170_aa
MGSGISSESKESAKRSKELEKKLQEDAERDARTVKLLLLEVKEEAEETEAAATTAGREGG
GGKEEEVQRGGGKRRRRKEEEEERGGGGKRRRRKEEEEERGGGGKRWRRKEVEEERGGGG
KRRRRRKEKEEEQRGGGGKRRRRKEEEEERGGGGGKRRRKRKEEEEERGG

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_4|513_bp
atgggaagtggaattagttcagagagcaaggagtcagccaaaagatcaaaagaactggag
aaaaagcttcaggaggatgctgagcgagatgcaagaaccgtaaagctgctactattagaa
gtaaaagaagaagcagaagaaacagaagcagcagcaacaacagcaggaagagaaggagga
ggaggaaaggaggaggaggtgcagagaggaggaggaaagaggaggaggaggaaagaggag
gaggaggaaagaggaggaggaggaaagaggaggaggaggaaagaggaggaggaggaaaga
ggaggaggaggaaagaggtggaggaggaaagaggtggaggaggaaagaggtggaggagga
aagaggaggaggaggaggaaagagaaggaggaggaacaaagaggaggaggaggaaagagg
aggaggaggaaagaggaggaggaggaaagaggaggaggaggaggaaagaggaggaggaag
aggaaagaggaggaggaggaaagaggaggatga

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_5|159_aa
MKAQLRNSPPCKDWLKLDNLQLGSCQDDARPHSRASLQASPCGFRLMSYPGARSAPVNPG
FRPISVEPGRPTHLLNQSTKIPANLWIGSLVKDFPRQSQSAKTKNVPTSSNMQTPMHRHK
DREKSGKHGTNEQKKSPVTNPKDIDIYVYVYRLKEIQNN

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_5|480_bp
atgaaggcccagctgcggaattctcctccatgtaaagattggctcaagttggataatcta
cagctcggtagctgtcaggatgatgccaggccgcactccagagccagcctccaagccagc
ccctgtggattcaggctcatgtcttaccctggtgccaggtcagcccctgtaaacccaggc
ttcaggccaatctccgtagaacctggcaggcccactcacctgctgaaccaatcaactaag
attccagcaaatctctggataggatcactggtgaaggattttcccagacaaagccagtct
gcaaagactaaaaatgttcctacttcttcaaatatgcagacaccaatgcacagacacaag
gatcgagaaaaatcagggaaacatggcacaaacgaacaaaagaaatcaccagtaactaac
cctaaagacatagatatttatgtctatgtctaccgccttaaagaaattcaaaacaattga

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_6|318_aa
MAEKISKNVEATSELGNRQWLEQFGGLRKMWENLELPRDLVNGFDKNVNSDMNNKVQAEV
VSGGDDELVWNWNKASKTLCSSTIALAFTKTLVHFSVADARQLEGERVVPRWRLYAVAQD
VVLVWDGVLTTCVGGSPVLCAPLAQKQGAGRDGACWLYAHQGSFCNAGRQESEEILHSHV
LVGQLKQNPPVQTCASKVMWGNAMGTGEAAVWGENGSKNVSTAEAVAERLSLASKGSVWG
AAELLLAQSLWQKVARGPDLEDLPGGYGEMLVGLQECGDAEAVDPQGCGDAEAVDPYPKG
RMQPGGVWAFKWCCVAVA

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_6|957_bp
atggctgaaaagatatccaaaaatgtggaagcaacttcagaactgggtaacaggcagtgg
ttggaacagtttggagggctcaggaaaatgtgggaaaatttggaacttcctagagactta
gtgaatggctttgacaaaaatgttaatagtgatatgaacaataaggtccaggctgaggtg
gtctcaggtggagatgatgaacttgtttggaactggaacaaagctagtaaaaccctctgt
agcagtaccattgcactggcatttaccaagaccctggtacatttttctgtggcagatgca
aggcagttggagggggagcgggtggtgccccgatggagactgtatgctgttgcacaggat
gtggtgttggtttgggatggggtgctgaccacctgcgtgggaggatcccctgttctctgt
gcaccattagcacaaaagcagggtgctggcagggatggggcttgctggctgtatgctcac
caaggctccttttgcaatgctggtcgacaggagtcagaggaaatattgcactcccatgta
ctggtggggcaattaaagcaaaacccgcctgtacaaacttgtgccagcaaagtgatgtgg
ggaaatgccatgggcacaggggaagctgcagtctggggagaaaatggtagcaagaatgtt
tccactgcagaggcagtggcagagaggctttcacttgcctctaaaggctctgtctgggga
gctgctgagttgctactggctcagtcactctggcagaaagtggctagaggcccagacctg
gaggacctgcctggtggatatggggagatgttagttgggctccaggagtgtggagatgca
gaggctgttgacccccaagggtgtggagatgcagaggctgttgacccctacccaaagggc
aggatgcagcctggtggagtctgggctttcaaatggtgctgtgttgcagttgcttag

>gi568815591r:80358674_80611926|GENSCAN_predicted_peptide_7|52_aa
XELAFGDVGPQDWLQSLAGADAESKQDFHGIAAENSEMRHRLSTLHLSLRLS

>gi568815591r:80358674_80611926|GENSCAN_predicted_CDS_7|159_bp
naagagcttgctttcggagatgtaggacctcaagactggctccagagtcttgcaggagca
gatgcagaaagtaaacaggatttccacggcatagcagctgagaactcagaaatgaggcac
aggctctcaacccttcatctatccttaaggttatcctga