FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB4448, 173 aa 1>>>pF1KB4448 173 - 173 aa - 173 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5450+/-0.00111; mu= 12.0738+/- 0.067 mean_var=92.8429+/-19.059, 0's: 0 Z-trim(104.6): 63 B-trim: 286 in 1/50 Lambda= 0.133107 statistics sampled from 7944 (8006) to 7944 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.246), width: 16 Scan time: 1.830 The best scores are: opt bits E(32554) CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 1099 221.0 3e-58 CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 743 152.6 1.1e-37 CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 ( 175) 736 151.3 2.9e-37 CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 ( 169) 677 139.9 7.2e-34 CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 615 128.0 2.8e-30 CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 615 128.0 2.9e-30 CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 610 127.1 5.5e-30 CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 ( 226) 606 126.4 1.1e-29 CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 597 124.6 3.1e-29 CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 314 70.2 6.4e-13 CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 314 70.2 6.4e-13 CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 314 70.2 6.4e-13 CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 293 66.1 1e-11 >>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 (173 aa) initn: 1099 init1: 1099 opt: 1099 Z-score: 1159.3 bits: 221.0 E(32554): 3e-58 Smith-Waterman score: 1099; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB4 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI 70 80 90 100 110 120 130 140 150 160 170 pF1KB4 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE 130 140 150 160 170 >>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 (166 aa) initn: 780 init1: 722 opt: 743 Z-score: 790.1 bits: 152.6 E(32554): 1.1e-37 Smith-Waterman score: 743; 64.0% identity (86.6% similar) in 172 aa overlap (1-172:1-166) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA :: .:.::. ::: .::::: ::::::::::::::.:::::::::::.::.::.: CCDS31 MAPKKAKKRAGGA------NSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFA 10 20 30 40 50 70 80 90 100 110 120 pF1KB4 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI .::..:::..:.: :.::: ::::::.::..:::::.:.: :::::::::..::.::: . CCDS31 ALGRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVL 60 70 80 90 100 110 130 140 150 160 170 pF1KB4 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE . .:....: .::.... ::::::: ::.:::::: : ..:::::::. CCDS31 KADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD 120 130 140 150 160 >>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 (175 aa) initn: 730 init1: 714 opt: 736 Z-score: 782.5 bits: 151.3 E(32554): 2.9e-37 Smith-Waterman score: 736; 63.4% identity (89.7% similar) in 175 aa overlap (1-173:1-175) 10 20 30 40 50 pF1KB4 MASRK--TKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDT ::::: :. : ... .:::.:::::: :::.:::::::::. .::::::.: : ::..: CCDS54 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB4 YASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKG :..:::..: ..::::::.:..::::::.::.::::::.::: ::.::.::.:.::.::: CCDS54 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB4 KINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE .::. .:.::..::::.. ::.::: .. .:.:::.:::.: :.::::.:::: CCDS54 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE 130 140 150 160 170 >>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 (169 aa) initn: 718 init1: 664 opt: 677 Z-score: 721.5 bits: 139.9 E(32554): 7.2e-34 Smith-Waterman score: 677; 57.7% identity (84.6% similar) in 175 aa overlap (1-173:1-168) 10 20 30 40 50 pF1KB4 MASRKTKKK--EGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDT :: ...:.. ::: ::.::: :.::::::::::::..::::::.::::::.:: CCDS10 MAPKRAKRRTVEGG-------SSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDT 10 20 30 40 50 60 70 80 90 100 110 pF1KB4 YASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKG .:..:. :::..:::::.::::::::::.::..:::::.:.: :..: .:::.:::.::: CCDS10 FAAMGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKG 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB4 KINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE :.:.....:: .: :... ::. .:. ::.::.::: . ::::::. :.. CCDS10 TIKKKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 120 130 140 150 160 >>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 (171 aa) initn: 586 init1: 341 opt: 615 Z-score: 657.1 bits: 128.0 E(32554): 2.8e-30 Smith-Waterman score: 615; 53.8% identity (80.3% similar) in 173 aa overlap (1-173:1-170) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA :.:..:: : : :::.::::. :.:.:::::::::...:::::::::::::.: : CCDS11 MSSKRTKTKTKK--RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA 10 20 30 40 50 70 80 90 100 110 120 pF1KB4 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI :::: : :. ::::..:: :::::::::..:::::.::: :..: ::: .: .. : : CCDS11 SLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTI 60 70 80 90 100 110 130 140 150 160 170 pF1KB4 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE ...:...:: ...:..: ::::.... : :: ::..: .. .. :: . .. CCDS11 QEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 120 130 140 150 160 170 >>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 (177 aa) initn: 586 init1: 341 opt: 615 Z-score: 656.9 bits: 128.0 E(32554): 2.9e-30 Smith-Waterman score: 615; 53.8% identity (80.3% similar) in 173 aa overlap (1-173:7-176) 10 20 30 40 50 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKED :.:..:: : : :::.::::. :.:.:::::::::...:::::::::::: CCDS77 MDLTTTMSSKRTKTKTKK--RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKED 10 20 30 40 50 60 70 80 90 100 110 pF1KB4 LKDTYASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDP :.: ::::: : :. ::::..:: :::::::::..:::::.::: :..: ::: .: CCDS77 LHDMLASLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB4 DGKGKINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE .. : :...:...:: ...:..: ::::.... : :: ::..: .. .. :: . .. CCDS77 EATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 120 130 140 150 160 170 >>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 (172 aa) initn: 586 init1: 341 opt: 610 Z-score: 651.9 bits: 127.1 E(32554): 5.5e-30 Smith-Waterman score: 610; 53.8% identity (79.8% similar) in 173 aa overlap (1-173:1-171) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA :.:.:.: : : :::.::::. :.:.:::::::::...:::::::::::::.: : CCDS11 MSSKKAKTKTTKK-RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA 10 20 30 40 50 70 80 90 100 110 120 pF1KB4 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI :::: : : ::::..:: :::::::::..:::::.::: :..: ::: .: .. : : CCDS11 SLGK-NPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTI 60 70 80 90 100 110 130 140 150 160 170 pF1KB4 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE ...:...:: ...:..: ::::.... : :: ::..: .. .. :: . .. CCDS11 QEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 120 130 140 150 160 170 >>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 (226 aa) initn: 749 init1: 604 opt: 606 Z-score: 646.1 bits: 126.4 E(32554): 1.1e-29 Smith-Waterman score: 638; 53.7% identity (70.2% similar) in 205 aa overlap (2-172:27-226) 10 20 30 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEF : :...:. :. ::::::: :.:.::::: CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGT-----ASSNVFSMFDQSQIQEF 10 20 30 40 50 40 50 60 pF1KB4 KE----------------------------------AFTLMDQNRDGFIDKEDLKDTYAS :: :::.::::::::::::::.::.:. CCDS34 KESLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAA 60 70 80 90 100 110 70 80 90 100 110 120 pF1KB4 LGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKIN ::. :::..::.::.::: ::::::.::..:::::.::: :::::.:::..: .::: .. CCDS34 LGRINVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVK 120 130 140 150 160 170 130 140 150 160 170 pF1KB4 KEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE . ::. ::.:::... ::: ::: :: :::::. : :::::::::. CCDS34 ADVIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD 180 190 200 210 220 >>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 (172 aa) initn: 568 init1: 310 opt: 597 Z-score: 638.4 bits: 124.6 E(32554): 3.1e-29 Smith-Waterman score: 597; 52.0% identity (80.9% similar) in 173 aa overlap (1-173:1-171) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA :.:...: : : :::.::::. :.:.:::::::::...:::::::::::::.: : CCDS13 MSSKRAKAKTTKK-RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA 10 20 30 40 50 70 80 90 100 110 120 pF1KB4 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI :::: : :. :..:..:: :::::::::..:::::.::: :..: ::: .: ...: : CCDS13 SLGK-NPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFI 60 70 80 90 100 110 130 140 150 160 170 pF1KB4 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE .......:: ...:..: ::::.:.. : :: ::..: .. .. :: . .. CCDS13 HEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 120 130 140 150 160 170 >>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa) initn: 285 init1: 193 opt: 314 Z-score: 345.5 bits: 70.2 E(32554): 6.4e-13 Smith-Waterman score: 314; 37.3% identity (73.2% similar) in 142 aa overlap (29-166:7-147) 10 20 30 40 50 60 pF1KB4 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA . :: ::::::.:.:.. :: : ..: .. CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR 10 20 30 70 80 90 100 110 pF1KB4 SLGKTNVKDDELDAMLKEA----SGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDG :::. : . ::. :..:. .: :.: ::.....:.. ::.:: : .::...: :: CCDS18 SLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 40 50 60 70 80 90 120 130 140 150 160 170 pF1KB4 KGKINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE .: :. ..... . ..:.: ::::.:.. :.:: :...:. . ..: CCDS18 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 100 110 120 130 140 173 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 18:18:18 2016 done: Fri Nov 4 18:18:18 2016 Total Scan time: 1.830 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]