GENSCAN 1.0	Date run:  6-Nov-116	Time: 11:04:05

Sequence gi568815581f:45707008_45934761 : 227754 bp : 50.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13403  13552  150  1  0   76    1   157 0.120   6.16
 1.02 Term +  21649  21918  270  0  0   43   44   141 0.066   0.68
 1.03 PlyA +  22268  22273    6                               1.05

 2.14 PlyA -  24712  24707    6                               1.05
 2.13 Term -  32469  32345  125  1  2   79   48    88 0.823   2.45
 2.12 Intr -  33152  33080   73  2  1  104   31    81 0.399   2.98
 2.11 Intr -  37085  37028   58  1  1   47  111    -3 0.007  -3.21
 2.10 Intr -  49895  49614  282  1  0   42   72   164 0.069   6.73
 2.09 Intr -  59081  58973  109  0  1   89   75    -7 0.138  -2.56
 2.08 Intr -  59881  59829   53  0  2  128   71    37 0.904   4.55
 2.07 Intr -  61853  61729  125  2  2   93   39   114 0.685   6.38
 2.06 Intr -  63630  63542   89  1  2   42  107    18 0.337  -1.21
 2.05 Intr -  66868  66710  159  2  0  110  101    -4 0.244   3.06
 2.04 Intr -  67114  66992  123  2  0  101   76     7 0.386   1.36
 2.03 Intr -  68907  68850   58  0  1  102   93    55 0.215   5.86
 2.02 Intr -  74922  74811  112  2  1   48   71    20 0.080  -3.32
 2.01 Init -  77406  77255  152  0  2   74   34   197 0.916  10.42
 2.00 Prom -  79247  79208   40                              -5.96

 3.00 Prom +  81995  82034   40                              -7.06
 3.01 Init +  87259  87328   70  0  1   80   74    14 0.051   0.41
 3.02 Intr +  88040  88080   41  0  2   91   70    65 0.127   2.94
 3.03 Intr + 100048 100090   43  0  1  131  109    55 0.627   9.71
 3.04 Intr + 108835 108899   65  2  2  110   89     9 0.728   1.64
 3.05 Intr + 109297 109369   73  0  1   82   64    65 0.901   2.48
 3.06 Intr + 109456 109575  120  2  0  108   80   133 0.925  14.97
 3.07 Intr + 114348 114433   86  1  2  136   78   167 0.988  20.04
 3.08 Intr + 122208 122314  107  2  2  105   94   162 0.993  17.51
 3.09 Intr + 123087 123207  121  0  1   30   76   247 0.969  18.20
 3.10 Intr + 123410 123563  154  1  1    4   72   344 0.995  24.05
 3.11 Intr + 123873 123933   61  1  1  118  100   125 0.999  14.49
 3.12 Intr + 126131 126203   73  2  1  119   99   151 0.972  18.71
 3.13 Intr + 126445 126530   86  0  2   40   91   105 0.994   4.62
 3.14 Intr + 126707 126842  136  2  1   94   92   249 0.985  26.47
 3.15 Intr + 127000 127041   42  0  0  143   78    16 0.955   4.54
 3.16 Term + 127617 127757  141  2  0  128   49   157 0.996  13.73
 3.17 PlyA + 132322 132327    6                               1.05

 4.00 Prom + 135045 135084   40                              -9.75
 4.01 Sngl + 137900 139954 2055  1  0   81   43  2618 0.972 248.85
 4.02 PlyA + 143667 143672    6                               1.05

 5.00 Prom + 147616 147655   40                              -6.16
 5.01 Init + 148198 148246   49  0  1   60   74    57 0.249   2.61
 5.02 Intr + 154908 154970   63  1  0   69   73    86 0.463   3.89
 5.03 Term + 161610 161797  188  1  2  -26   55   176 0.252   0.55
 5.04 PlyA + 162049 162054    6                               1.05

 6.04 PlyA - 163930 163925    6                               1.05
 6.03 Term - 175177 175044  134  2  2   35   48   158 0.480   4.75
 6.02 Intr - 187862 187605  258  0  0   45   86   113 0.058   4.23
 6.01 Init - 188572 188473  100  1  1   81   66   202 0.127  15.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_1|139_aa
LEPLANDFSHQEDTPVGRHSQTQQAHVLRKRTLCHSFSLLQCPASEPPYRVIELVEWADQ
EEGSVPSIGVMSHGIGIGVAVVTSGRNSSAGTSSLQGEDPGAPALVAWREMDNFWGALWL
LEMEGIEGGGDGTCEGMEL

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_1|420_bp
ctagagcccctggcaaatgacttctcacaccaggaagacacccctgtgggaagacactcc
cagacccagcaggcccacgtgctccgcaaacggaccctgtgccacagtttttctctgctg
cagtgcccggcttcagagcccccgtacagggtaattgaactagtggagtgggctgaccaa
gaggaggggagcgttcccagcattggggtgatgagccatggaattggcattggagtggct
gtagtcacaagtggaaggaattcatctgctggcacatccagcctgcagggagaggaccca
ggggcgcctgcacttgtggcctggagggagatggacaacttctggggtgccctctggttg
ttggagatggagggcattgaaggaggaggggacggcacatgcgaaggcatggagttgtga

>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_2|505_aa
MPGSALPGPAARPGPARLSLAPSRGSLAAVSRRSPARGRLLPASPPPPPPRSQTFSLSEV
ASTDSSFHPVCVDFTDLTSTPPHPADGQGMAAAPGPLPDSVDLKSKSGLYPQICLPDLTQ
PSPCCVALGTSCLLDLGFLVCEIAVVLRAPCRGPHQKDWWMVNLSRVTRGHSFLGPNVSR
VFSFQWVCGAADFKNEAVDLRGWGDKFSVRTNIRRKKKTLSNCIRTRHTIEMRQPKSRDV
TGPRSHSGRELIPQAIRFPNAAPSGPFVLLLDGLQGYQFLGRFAEIVDPIMHGQPVKGAA
HPTAPPQAGTDHSAPAGSLLAAKPWGRGLNVGREVGGNCSSLADQSREAQKQSLSPLPIP
VPLLPPTDSQDSLQSGTFIMKTDVTRQGSEQGFAVSDFDGSNLELLVTRSTQLRYSPPIT
RVWVWQRSNIPHASCRERGLATGPKVQARAVPVEQERDSNFLVKGRGDSRDRKKGSESLR
YNIKYQLNKAGTRTHCLVMQNDAQF

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_2|1518_bp
atgcccggctcggcgcttcccggccccgcggcccggcccggcccggcccggctctcgctc
gccccttcccggggaagtctggccgccgtttcccgacgcagcccggcccgcggccgcctc
ttgccggcctcgcccccgccacctcccccacggagtcagaccttctcgctttctgaagtg
gcgtctacagatagctcatttcatcctgtctgtgttgatttcactgacttaacctccacc
ccaccacatcccgctgacggacagggcatggctgctgccccagggcccctgccagactca
gtggacctgaagtctaagtctgggttgtatccccaaatctgcctgccagacctgacccag
ccatccccttgctgtgtggccttgggcacatcatgtcttctggatctcggtttcctggtc
tgtgaaatagcagtggtgctgagagcaccctgtagagggccccaccagaaggactggtgg
atggtaaatctttctagagtgaccaggggccattcattccttggccctaatgtgtccaga
gttttttccttccagtgggtttgtggtgccgctgacttcaagaatgaagctgtggacctt
cgcggatggggagataaatttagtgtcagaaccaacattcgaagaaagaaaaaaacttta
agcaactgcatcagaacacggcacacaatagagatgaggcagccgaaatccagagatgtg
actggcccaaggagtcacagtgggcgagaacttattcctcaggccattagattccctaat
gctgcaccttcgggcccctttgtgctgctgctggacgggctccaaggttatcagtttctt
ggtagatttgcagagatcgtcgatccaataatgcatggacagcctgtgaagggggctgcc
caccccacagccccgccccaggctggcaccgatcactctgcccctgcagggtccctccta
gctgctaagccctggggaagggggttgaatgttggacgagaagtcggaggaaattgctct
tcgctggcagatcaaagccgtgaagctcagaaacaaagcctctcccctctccccatccct
gtccctctgcttccacccaccgacagccaagacagcctgcaatcaggcaccttcattatg
aagactgatgttaccagacagggatctgagcaaggttttgctgtgtctgattttgatggt
agtaatttagagctcttggtaactagatcaacacagctccgttactccccaccaatcacc
agagtgtgggtttggcagaggagcaacatccctcatgccagctgcagggagagaggcttg
gccacaggacccaaagtccaggccagagcagtccctgtggaacaggagcgggacagcaat
ttcttggtgaaaggaaggggagacagcagagatagaaagaagggctctgaaagtctgagg
tacaatatcaagtaccagctgaacaaagctggaactcgcacacattgcttggtaatgcaa
aatgacgcacagttttga

>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_3|472_aa
MDSHEMLTLQFCTSQVVDQEPIVGGDLEELTQQGQDRDQHCESLSLASNISAHFSISPVL
GPCTEQSTRDVWSDELISALVIVVILSLAGVSGNEWGGLQCNASVDLIGTCWPRSPAGQL
VVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVNYSECQEILNEEKKSKVHYHVAVIIN
YLGHCISLVALLVAFVLFLRLRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQS
NVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPII
VAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTT
SETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFY
CFLNSEVRSAIRKRWHRWQDKHSIRARVARAMSIPTSPTRVSFHSIKQSTAV

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_3|1419_bp
atggattcacatgaaatgcttactctccagttttgtacttctcaagttgtagaccaggaa
ccaattgttggaggagatctggaggagctgacccagcagggccaggacagagaccagcac
tgcgagagcctgtccctggccagcaacatctcagctcacttctccatcagtcctgtccta
gggccctgcacagaacaaagtacacgtgacgtatggtcagatgagctcatttctgcactg
gtcattgttgtcatcctgtccctagctggtgtgagtgggaacgagtggggaggactgcag
tgcaacgcatccgtggacctcattggcacctgctggccccgcagccctgcggggcagcta
gtggttcggccctgccctgcctttttctatggtgtccgctacaataccacaaacaatggc
taccgggagtgcctggccaatggcagctgggccgcccgcgtgaattactccgagtgccag
gagatcctcaatgaggagaaaaaaagcaaggtgcactaccatgtcgcagtcatcatcaac
tacctgggccactgtatctccctggtggccctcctggtggcctttgtcctctttctgcgg
ctcaggagcatccggtgcctgcgaaacatcatccactggaacctcatctccgccttcatc
ctgcgcaacgccacctggttcgtggtccagctaaccatgagccccgaggtccaccagagc
aacgtgggctggtgcaggttggtgacagccgcctacaactacttccatgtgaccaacttc
ttctggatgttcggcgagggctgctacctgcacacagccatcgtgctcacctactccact
gaccggctgcgcaaatggatgttcatctgcattggctggggtgtgcccttccccatcatt
gtggcctgggccattgggaagctgtactacgacaatgagaagtgctggtttggcaaaagg
cctggggtgtacaccgactacatctaccagggccccatgatcctggtcctgctgatcaat
ttcatcttccttttcaacatcgtccgcatcctcatgaccaagctccgggcatccaccacg
tctgagaccattcagtacaggaaggctgtgaaagccactctggtgctgctgcccctcctg
ggcatcacctacatgctgttcttcgtcaatcccggggaggatgaggtctcccgggtcgtc
ttcatctacttcaactccttcctggaatccttccagggcttctttgtgtctgtgttctac
tgtttcctcaatagtgaggtccgttctgccatccggaagaggtggcaccggtggcaggac
aagcactcgatccgtgcccgagtggcccgtgccatgtccatccccacctccccaacccgt
gtcagctttcacagcatcaagcagtccacagcagtctga

>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_4|684_aa
MACLGFLLPVGFLLLISTVAGGKYGVAHVVSENWSKDYCILFSSDYITLPRDLHHAPLLP
LYDGTKAPWCPGEDSPHQAQLRSPSQRPLRQTTAMVMRGNCSFHTKGWLAQGQGAHGLLI
VSRVSDQQCSDTTLAPQDPRQPLADLTIPVAMLHYADMLDILSHTRGEAVVRVAMYAPPE
PIIDYNMLVIFILAVGTVAAGGYWAGLTEANRLQRRRARRGGGSGGHHQLQEAAAAEGAQ
KEDNEDIPVDFTPAMTGVVVTLSCSLMLLLYFFYDHFVYVTIGIFGLGAGIGLYSCLSPL
VCRLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAYRNEDRWAWLLQDTLGISYC
LFVLHRVRLPTLKNCSSFLLALLAFDVFFVFVTPFFTKTGESIMAQVALGPAESSSHERL
PMVLKVPRLRVSALTLCSQPFSILGFGDIVVPGFLVAYCCRFDVQVCSRQIYFVACTVAY
AVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAACRQELSLFWTGQGRAKMCGLGCA
PSAGSRQKQEGAADAHTASTLERGTSRGAGDLDSNPGEDTTEIVTISENEATNPEDRSDS
SEGWSDAHLDPNELPFIPPGASEELMPLMPMAMLIPLMPLMPPPSELGHVHAQAQAHETG
LPWAGLHKRKGLKVRKSMSTQAPL

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_4|2055_bp
atggcgtgcctgggcttcctcctccccgtgggcttcctcctcctcatcagcaccgtggcc
gggggaaagtacggcgtggcccacgtggtgtcggagaattggagcaaggactactgtatc
ctgttcagctccgactacatcaccctcccccgggacctgcaccacgccccactcctgccc
ctgtatgatggcaccaaggcaccctggtgcccgggtgaggattccccccaccaggcccag
ctccgctcccccagccagcggcccctccgccagaccactgccatggtcatgaggggtaac
tgcagcttccacacgaaaggctggctggctcagggccaaggtgcccacgggctgctcatc
gtgagccgggtcagtgaccaacagtgctcagacaccaccctggcaccccaggatccccgc
cagcccctggcagacctcaccatccctgtggctatgctccactatgctgacatgctggac
atcctcagccacactcgtggggaggccgtcgtccgcgtggccatgtacgcacccccagag
cccatcatcgactacaacatgctggtcatcttcatcctggctgtgggcacagtggctgca
ggcggctactgggccggcctgaccgaagccaaccggctacagcggcgccgtgcccgaaga
ggaggggggtctggtggtcaccatcagctgcaggaagctgcagcagctgagggagcccag
aaggaagataatgaggacatcccagtggacttcacgccggccatgacaggcgtggtggtc
accctgtcctgctcgctcatgctgctgctctacttcttctatgaccactttgtctatgtc
accattgggatctttggcctgggtgctggcattggcctctacagctgcctgtcacccctg
gtgtgccgcctgtccctgcggcaataccagaggcctccgcacagcctctgggcctctctg
ccgctgcctctgctgctgctggcgagcctgtgcgcaaccgtgatcatcttctgggtggcc
taccgcaatgaggaccgctgggcgtggctcctgcaggacacactgggcatttcctactgc
ctgttcgtcctgcaccgtgtgcggctgcccactctcaagaactgctcctccttcctgctg
gccctgctggcctttgatgtcttctttgtcttcgtcacccccttcttcaccaaaaccggt
gagagcatcatggcgcaggttgccttgggccctgcagagtcttcaagccatgagaggctg
cccatggtactcaaagtgccccggctaagagtctccgccttgaccctgtgcagccagccc
ttctccatccttggcttcggtgacattgtggtccccggcttcctggttgcttactgttgc
cgctttgatgtgcaagtctgctcccgtcagatctacttcgtggcctgcaccgtggcctat
gctgtgggcctgctggtcacattcatggccatggtcctcatgcagatgggccaacctgcc
ttgctctacctagtgtccagcaccctgctcaccagcctggctgtggctgcctgccgccaa
gagctcagcctcttctggactggccagggcagagctaagatgtgtgggctcggctgtgcc
ccttcagctggctctaggcagaagcaggagggcgcagcagatgcccacacagccagcaca
cttgagagaggcaccagccgaggagcaggggacttagacagcaaccctggagaagacacc
actgagattgtcaccatatctgagaatgaagccaccaatccagaggaccgcagtgatagc
tccgagggctggagtgacgcccacttggatcctaatgagctgcccttcatcccccctggg
gcctcggaggagctgatgccactgatgccaatggccatgctgatcccactcatgcccctg
atgcccccgccctcagagctgggccatgtccatgcccaggcccaggcccacgagactggc
ctgccctgggcgggactccacaagaggaagggtttgaaagtaagaaagagcatgtcgacc
caggctcccttgtga

>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_5|99_aa
MWPQAKDCQQPARAGRVGSFQWVRGLADFQNEASDPRSKVNPLDGYTVAQHRTQCTHNAA
RQNPTFIPGPGNSIFEESPELKQLVKGLSTNYERGPGQD

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_5|300_bp
atgtggccacaagccaaggactgccagcagccagcacgagctggaagggtcggttccttc
cagtgggttcgtggtcttgctgacttccagaatgaagcctcggaccctcgcagcaaggtg
aacccactggacggttacactgttgctcagcacagaactcagtgtacccacaacgctgca
cgccagaatcccaccttcataccaggtccaggtaacagcatctttgaggagagcccagag
ctgaagcaattagtcaaaggtttaagtaccaattatgagagaggccctggacaggactga

>gi568815581f:45707008_45934761|GENSCAN_predicted_peptide_6|163_aa
MHLQPRAHPCVAAAVRARERGPAAAESVHIARPGPFPGRPGPSPRAGEAGRGPAVAPTDA
RRTKPQSAEREGEGRRRRGAQRRTARQISEPRRLPDSRQRRGRERTAEEEKVAVVAAAEE
MTYYGRDSGQPSRQEDESGGCQLASAMGRPNADLMDIRMKQQW

>gi568815581f:45707008_45934761|GENSCAN_predicted_CDS_6|492_bp
atgcacctgcagccccgcgcccatccgtgcgtggctgcggctgtgcgtgcccgcgaacgg
ggaccagcggccgccgagtccgtccacatcgccaggccaggtccctttccaggccgccct
ggccccagcccccgagcaggggaggcagggaggggccctgcggtggccccgaccgatgcc
cggcgcacgaagccccagtctgcggagagggagggcgaggggcggcggcgcaggggtgca
cagaggcggacggcgaggcagatttcggagccgcggcgcttacctgatagtcgacagagg
cgaggacgggagaggacagcggaggaggagaaggtggctgtggtggcggcggcagaagag
atgacctactatggaagagacagtggacaaccaagtagacaagaggacgagagtggggga
tgccagttggcctctgccatgggccgtcccaatgctgacctgatggacatacgaatgaag
cagcagtggtga