GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:52:15

Sequence gi568815595f:191229675_191489604 : 259930 bp : 37.62% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  16903  17147  245  2  2    6   37   361 0.478  17.88
 1.02 PlyA +  18128  18133    6                               1.05

 2.04 PlyA -  19351  19346    6                               1.05
 2.03 Term -  69759  69655  105  0  0   62   41   119 0.120   2.03
 2.02 Intr -  82094  81886  209  0  2   55   42   156 0.216   5.57
 2.01 Init -  86939  86873   67  2  1   89   45    72 0.396   4.29
 2.00 Prom -  94877  94838   40                              -6.05

 3.03 PlyA -  95033  95028    6                               1.05
 3.02 Term - 100034  99559  476  0  2   76   48   336 0.712  22.46
 3.01 Init - 106688 106601   88  2  1   39   48    68 0.213  -1.25
 3.00 Prom - 110614 110575   40                              -1.95

 4.00 Prom + 122675 122714   40                              -4.85
 4.01 Init + 123709 123778   70  0  1   83   81     4 0.571   0.46
 4.02 Intr + 127414 127476   63  2  0   73   70   101 0.959   4.57
 4.03 Intr + 128324 128450  127  0  1   79   48   183 0.989  12.22
 4.04 Intr + 131395 131485   91  1  1   81   60   116 0.987   7.18
 4.05 Intr + 140245 140362  118  0  1  126   77   182 0.998  20.02
 4.06 Intr + 145388 145915  528  0  0   84   90   351 0.954  26.88
 4.07 Intr + 150485 150600  116  0  2   67   85   171 0.989  13.95
 4.08 Intr + 151013 151057   45  1  0   62  100    48 0.679   1.09
 4.09 Intr + 151154 151258  105  1  0   81   75   121 0.993   9.59
 4.10 Intr + 153072 153151   80  2  2   78  115    56 0.970   4.73
 4.11 Intr + 159822 159928  107  0  2   59  116    66 0.897   5.44
 4.12 Term + 162067 162086   20  2  2  137   42    -6 0.667  -2.80
 4.13 PlyA + 162470 162475    6                               1.05

 5.00 Prom + 163619 163658   40                              -4.95
 5.01 Init + 171849 172004  156  2  0   76  103   125 0.788  12.76
 5.02 Intr + 185259 185425  167  2  2   91   58    66 0.009   1.74
 5.03 Intr + 192268 192416  149  1  2   58  109    -3 0.002  -2.24
 5.04 Term + 196820 197004  185  0  2   85   42    96 0.272   1.42
 5.05 PlyA + 198244 198249    6                               1.05

 6.00 Prom + 210279 210318   40                              -1.65
 6.01 Sngl + 231489 231782  294  2  0   86   40   302 0.997  20.65
 6.02 PlyA + 231913 231918    6                               1.05

 7.05 PlyA - 232812 232807    6                               1.05
 7.04 Term - 237533 236765  769  1  1   29   54   251 0.046   7.68
 7.03 Intr - 241672 241400  273  0  0   43   90   152 0.100   6.63
 7.02 Intr - 247536 247397  140  0  2  105   64   -19 0.018  -4.26
 7.01 Intr - 252607 252429  179  2  2   16   73   158 0.203   5.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_1|81_aa
XWVTELDPVSKKKKERKKERKEEEEGKGKGEGEEEEEEEEDEKEEEEEEEEEGGGRGEGG
EGGEGGEELEATAFLDSLSKP

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_1|246_bp
ncctgggtgacagagctagaccctgtatcaaaaaaaaaaaaagaaagaaagaaagaaaga
aaagaagaagaggaagggaaaggtaaaggggaaggggaagaggaagaagaggaagaggag
gatgaaaaggaagaagaagaggaagaagaagaagaaggaggaggaagaggagaaggagga
gaaggaggagaaggaggagaagaactagaggccacagcattccttgattcattatctaag
ccttga

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_2|126_aa
MDQSALCKTDQSALCKMYRSAGSEKYHLTPKGYCLIKALMNAQVTKALKSLRSSVVAASS
VEDAATELGYLKSMRKVGLWNGTGRWNSTMGMTWLELKQLSCEEQCPEAAKGIGALALAH
KTILPS

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_2|381_bp
atggaccaatccgctctttgtaaaacggaccaatcagctctctgtaaaatgtaccgatca
gcaggatctgagaaatatcacctaacgcctaaaggatactgtctcattaaggcactaatg
aatgcacaggtgacgaaggcactgaaatcattgagaagctcagtggtagctgcttcatca
gtggaagatgctgctacagaactaggctatctaaaaagtatgaggaaagtgggcctctgg
aatggaacaggccgttggaatagtaccatgggaatgacgtggctggagctgaagcaactg
agctgtgaagagcagtgtccagaggctgcaaagggtattggggcccttgccctggcccac
aaaaccatccttccgtcctag

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_3|187_aa
MVKIKKSKWVLKISNASKDAEQLELTYIAGSLDWSMLTSAIPGQGPGCPFNAGFPVTAGA
ERGPERSSSAGRGAKSGRQGSQAGERSGSGGQGLVTKAAGDGPRGTKLAAQLPRRGHLLR
VPGPNRYQISGARKWTGAVQYGGREETERRAGRLGEGELQVCNRNCEWLASEDQRPLPPR
CCLLCAQ

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_3|564_bp
atggttaaaattaaaaaaagtaaatgggtcctgaaaatatcaaatgccagcaaggatgca
gaacaactggagctcacatacattgctggcagcttggactggtcgatgctgacttcagcc
ataccgggccagggtcccggttgcccctttaacgcgggcttcccggtcaccgccggcgcc
gagcggggccccgagcgcagcagcagcgccggacgcggcgcaaagtccggccggcagggc
tcgcaggccggagaacggagcgggtcgggcgggcaggggctggtgaccaaagcagcggga
gacggtccccgaggcaccaagctggcggcccagctgccccgccgcggccacctgctccgc
gtccccggccccaatcgataccaaatatccggagcccggaaatggaccggggccgtccag
tacggagggagagaggagacagaaaggcgggcgggccggctgggggagggggagctgcag
gtctgtaaccgcaattgcgagtggctggcgagcgaagatcagcgcccgctgccgcctcgc
tgttgtctcctttgtgctcagtga

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_4|489_aa
MGGKKFEKWEGERWFTLNVPTEKVCRDFAVLEDHTLAHSLQEQEIEHHLASNVQRNRLVQ
HDLQVAKQLQEEDLKAQAQLQKRYKDLEQQDCEIAQEIQEKLAIEAERRRIQEKKDEDIA
RLLQEKELQEEKKRKKHFPEFPATRAYADSYYYEDGDQPGSRRARELGSGFSRPCRLQRD
GKTVKHKKEKPEHPLENLEEPEQHCSSKRSLSSSSSGKGRDNPHINNEQHERKRSTQERP
RRPLLPTISGEVFLSTECDDWETKINHQTRNWEKQSRHQDRLSPKSSQKAGLHCKEVVYG
RDHGQGEHRKRRHRPRTPPFSESEEQLHLHDAGMKPRVMKEAVSTPSRMAHRDQEWYDAE
IARKLQEEELLATQVDMRAAQVAQDEEIARLLMAEEKKAYKKAKEREKSSLDKRKQDPEW
KPKTAKAANSKSKESDEPHHSKNERPARPPPPIMTDGEDADYTHFTNQQSSTRHFSKSES
SHKGFHYKH

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_4|1470_bp
atgggaggcaaaaagtttgagaaatgggagggtgaaaggtggttcaccttaaatgtgccc
acagagaaagtatgccgagattttgctgtcctggaggaccacaccctggctcacagcctg
caggaacaagagattgagcatcatttggcatcgaacgttcagcggaaccgtttggtccag
catgatctccaggtggctaagcagctccaagaggaagatctgaaagcgcaggcccagctc
cagaagcgctacaaagaccttgaacaacaagactgtgaaattgctcaggaaattcaggag
aagctggctattgaggcagagagacgacgcattcaggagaagaaggatgaggacatagct
cgccttttgcaagaaaaggagttacaggaagagaaaaagagaaagaaacactttccagag
ttccctgcaacccgtgcttatgcagatagttactattatgaagatggagaccaaccaggg
tcaaggagggccagggaattgggttctggattctcaagaccttgtagactccaaagagat
ggaaagactgtgaagcacaagaaagagaaaccagaacatccactggagaacttggaagag
ccagaacaacattgttcatcgaagagatccctgtcatcctctagctcgggcaaagggagg
gacaatccccatattaacaatgagcagcatgaaaggaaacggtccactcaggagaggcct
cggagacctctgcttcccacgatcagtggtgaagtgtttctgagcactgaatgtgatgac
tgggagactaagattaaccatcagactcgaaattgggaaaaacagtctcgacaccaagat
cgactttcacccaagtcctcacaaaaagcagggcttcactgcaaggaagttgtatatggg
agggaccatgggcaaggtgagcacagaaaaaggagacacaggcccaggactcctccattc
tcagagagtgaggagcagctccacctccatgacgcaggaatgaagccaagagtgatgaaa
gaagctgtatctactccatcacgaatggcccacagggatcaggaatggtatgatgctgaa
attgccagaaaactgcaagaagaagaacttttggctacccaggtggacatgagagccgct
caagtagctcaagatgaagaaatcgctcgacttctaatggctgaagaaaagaaagcttac
aaaaaagccaaggagcgggagaaatcatctttggacaaaagaaagcaagaccccgagtgg
aagccaaaaacagctaaagcagcaaattccaagtcaaaagagagtgatgaacctcaccat
tctaagaatgaaaggccagcacggccaccaccacctatcatgacagatggtgaagatgcg
gattacactcattttacaaaccagcagagttccacacggcatttctcaaaatcagagtcc
tctcataaaggttttcattacaaacattaa

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_5|218_aa
MDSHDYKMEFHYRPSASWGREKLISALSKSESLKTRETDCSFQSVAKAQEPMVALFEKLN
HTHSCKEHKKPTPVLEEEAFCMLTKFENAVTPCIRPFSHCYKEIPQTGHGLNATKLSSSY
CFLNLNTVHAVTAHIDLLLSFQSIFSYTVFMNITRSTECGLGTSIMDKPWQHVKMPNLRL
HPRPMESKSAFLTQFPEDVQIELYDKPKNLSSQVKVFN

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_5|657_bp
atggactcccatgattataagatggagttccactataggccgtctgcaagctggggaaga
gagaagctgatatcggctctgtccaagtccgaaagcctcaaaaccagggaaactgactgc
agctttcagtctgtggccaaagcccaagagcccatggtggccctctttgagaagctaaac
cacacacatagctgtaaagaacacaaaaagcccacacctgtcctggaggaagaagcattc
tgcatgctgacaaagtttgaaaatgcagttactccctgtattaggccattctcacattgt
tataaagagatacctcagaccgggcatggtctgaatgctacaaaactgagttcaagctat
tgcttcctaaatttgaacaccgttcatgcagtcacagcccacatcgatcttttattaagc
tttcagtctattttctcatacaccgtttttatgaacatcaccagaagtacagagtgtggt
ctgggaactagcatcatggacaaaccctggcagcatgttaaaatgccgaatcttagactc
caccccagacccatggaatcaaaatctgcatttttaactcaattcccagaagatgtgcag
attgaattgtatgataaacctaagaacctaagttctcaggtgaaagtttttaattga

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_6|97_aa
MASSAELDFNLQALLEQLSQDELSKFKSLIRTISLGKELQTVPQTEVDKANGKQLVEIFT
SHSCSYWAGMAAIQVFEKMNQTHLSGRADEHCVMPPP

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_6|294_bp
atggcatcttctgcagagctggacttcaacctgcaggctcttctggagcagctcagccag
gatgagttgagcaagttcaagtctctgatcagaacaatctccctgggaaaggagctacag
accgtcccccagacagaggtagacaaggctaatgggaagcaactggtagaaatcttcacc
agccactcctgcagctactgggcagggatggcagccatccaggtctttgaaaagatgaat
caaacgcatctgtctgggagagctgatgaacactgtgtgatgcccccaccttaa

>gi568815595f:191229675_191489604|GENSCAN_predicted_peptide_7|453_aa
XTRENEDAKVETPDKPVRLIHSHENSMKETKPTPKIQVLSHWVPPITRVNYGSTIQNEIL
GNLMKKLLIFHITPTPSSHILNQFSFSGDSKICWAQQLPVSAILSSRNDLSIVDFGICGG
SWNQSPYGYTERTVIVKAGYIICRAGGKCKYRDPGIKEELVSLLFPKAFHSTHYEWVKYC
ILKELRHWNEFCIWIRGGDEAHLIMVDKLFDVLLDLVCQYFTEEFCINVHQGYWSKILFF
GCVSAWLWYQDDMIVYLENPLVSAQNLLKLISNFSKVSGHKINVQKSKAFLYTNNRQTES
QIMSELPFTIASKRIKYLGIQLTRDVKDLLKENYKPLLNEIKDDTNKWKNIPRSWVGKIN
IVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIVKLILSQKNKAGGIT
LPDFKLYYKTTGTKTAWYWYQNRDVDQWNRIEP

>gi568815595f:191229675_191489604|GENSCAN_predicted_CDS_7|1362_bp
nccacaagagaaaatgaagatgcaaaagtggaaacccctgacaaacccgtgagacttatt
cactcccatgagaacagtatgaaggaaacaaagcccacccccaagattcaagttctctcc
cactgggtccctccaataacacgtgtgaattatgggagtacaattcaaaatgagattttg
ggaaatctcatgaaaaagctgctcatctttcatataacacccaccccttcttcccatatt
ctaaaccaattttctttttctggggacagtaaaatctgttgggcacaacaacttccagtg
agtgctatactttcttccagaaacgacttgagtatcgtggattttggtatttgtgggggc
tcctggaaccaatccccttatgggtacacagaaaggactgtcatagtcaaagctggctac
ataatctgcagagctggtggaaaatgcaaatacagggacccgggaataaaggaagaactg
gtcagtctcctcttcccaaaggctttccactcaacccattatgagtgggtgaagtattgc
atcctaaaagaattaagacactggaatgaattttgtatctggattagaggaggggatgaa
gcccacttgatcatggtggataagctttttgatgtgctgctggatttggtttgccagtat
tttactgaggaattttgcatcaatgttcatcaaggatattggtctaaaattctctttttt
ggttgtgtctctgcctggctttggtatcaggatgacatgattgtatatctagaaaacccc
cttgtctcagcccaaaatctccttaagctgataagcaactttagcaaagtctcaggacac
aaaatcaatgtacaaaaatcaaaagcattcttatacaccaataacagacaaacggagagc
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatc
caacttacaagggacgtgaaggacctcttgaaggagaactacaaaccactgctcaatgaa
ataaaagacgatacaaacaaatggaagaacattccacgctcatgggtaggaaaaatcaat
atcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaag
ctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaa
aaaagagcccgcattgtcaagttaatcctaagccaaaagaacaaagctggaggcatcaca
ctacctgacttcaaactatactacaagactacaggaaccaaaacagcatggtactggtac
caaaacagagatgtagatcaatggaacagaatagagccctga