GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:16:35

Sequence gi568815596f:178012547_178226173 : 213627 bp : 39.31% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1914   1756  159  0  0  109   69   188 0.890  18.26
 1.01 Init -  15640  15551   90  1  0   61   81    71 0.366   4.24
 1.00 Prom -  27210  27171   40                              -4.95

 2.00 Prom +  36204  36243   40                              -4.05
 2.01 Init +  37599  37827  229  2  1   60   69   166 0.836  10.48
 2.02 Term +  38023  38243  221  2  2  -23   54   192 0.451   0.92
 2.03 PlyA +  38731  38736    6                               1.05

 3.00 Prom +  38858  38897   40                              -7.15
 3.01 Sngl +  38933  40246 1314  1  0   56   40   295 0.631  17.30
 3.02 PlyA +  40568  40573    6                               1.05

 4.06 PlyA -  42512  42507    6                               1.05
 4.05 Term -  46944  46871   74  1  2   64   48    84 0.612  -0.91
 4.04 Intr -  47440  47305  136  1  1   77   77    90 0.858   6.02
 4.03 Intr -  49867  49816   52  0  1  114   65    26 0.590   0.89
 4.02 Intr -  55439  55351   89  2  2    6   85   104 0.403  -0.25
 4.01 Init -  59891  58980  912  2  0  100   91   805 0.463  75.54
 4.00 Prom -  75467  75428   40                              -2.65

 5.00 Prom +  78077  78116   40                              -6.95
 5.01 Init +  78865  78947   83  0  2   59   93    61 0.021   4.19
 5.02 Intr +  95701  95874  174  1  0   56   -1   201 0.410   6.13
 5.03 Intr +  99817 100729  913  1  1   47   92   794 0.853  66.04
 5.04 Intr + 103716 103838  123  2  0   69   63   201 0.998  15.56
 5.05 Intr + 105509 105635  127  1  1   75   72   166 0.990  13.03
 5.06 Intr + 107741 107863  123  0  0   58  111    47 0.919   3.64
 5.07 Intr + 110976 111105  130  1  1  111   89    66 0.996   7.83
 5.08 Intr + 111291 111366   76  0  1   38  115    40 0.846   0.30
 5.09 Intr + 111581 111744  164  1  2   81   99    82 0.991   6.45
 5.10 Term + 113438 113630  193  2  1   71   37   171 0.953   6.21
 5.11 PlyA + 113822 113827    6                               1.05

 6.00 Prom + 118079 118118   40                              -3.35
 6.01 Init + 137681 137840  160  1  1   83   91    60 0.369   5.83
 6.02 Intr + 144868 145029  162  2  0   86   60    80 0.368   4.03
 6.03 Intr + 161440 161612  173  2  2  -12   79   155 0.006   3.34
 6.04 Intr + 163858 163919   62  0  2   63   93    65 0.159   1.11
 6.05 Term + 176066 176165  100  2  1  106   36    74 0.236   0.62
 6.06 PlyA + 176909 176914    6                               1.05

 7.06 PlyA - 178200 178195    6                               1.05
 7.05 Term - 179178 179136   43  2  1   72   44   106 0.018   0.25
 7.04 Intr - 182877 182711  167  0  2  107   51   172 0.049  13.24
 7.03 Intr - 192139 191982  158  2  2   95  105    26 0.280   3.81
 7.02 Intr - 205833 205714  120  1  0   65   37    79 0.108   0.05
 7.01 Intr - 208337 208259   79  2  1   61   60   101 0.144   2.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_1|83_aa
MEKEGFRDAGTYSGEGNVYGTNQLQGSTWKDRRFNDEIDKLTGYKTKSLLCMPIRSSDGE
IIGVAQAINKIPEGAPFTEDDEK

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_1|249_bp
atggagaaggaaggcttcagggatgcagggacttatagtggggaagggaatgtgtatgga
accaaccagctccagggatccacctggaaggatcgacgattcaatgatgaaatcgacaag
ctaactggatacaagacaaaatcattattgtgcatgcctatccgaagcagtgatggtgag
attattggtgtggcccaagcgataaataagattcctgaaggagctccatttactgaagat
gatgaaaaa

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_2|149_aa
MKLPEERSGSNICRSAIFAVLQPLLVIPRQTGSGVDLQQTPTDLQQRVLTVRRKTNKQKG
HPHQNPICTSPSSKTKGGCSNPCKEAKNLEKRLEEWLNRINSVEKTLNDLMELKTMAREL
RDACTRFSSRFDQLEERVSVIEDQMNEMK

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_2|450_bp
atgaagcttccggaagaacgatcaggcagcaacatttgccgttctgcaatatttgcggtt
ctgcagcctctgctggtgatacccaggcaaacagggtctggggtggacctccagcaaact
ccaacagacctgcagcagagggtcctgactgttagaaggaaaactaacaaacagaaagga
catccacaccaaaaccccatatgtacatcaccatcatcaaagactaaaggagggtgttcg
aacccctgcaaagaagctaaaaaccttgaaaaaagattggaagaatggctaaatagaata
aacagtgtagagaagaccttaaatgacctgatggagctgaaaaccatggcacgagaacta
cgtgacgcatgcacaagattcagtagccgattcgatcaactggaagaaagggtatcagtg
attgaagatcaaatgaatgaaatgaagtga

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_3|437_aa
MTGSNSHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCYIQETYLMCRDTHRLKIKGCR
KIYQANGKQRQKKAGVAILVSDKTDFKPTKIRRDKEGHYIMVKGSIQQEELTILNIYAPN
TGEPRFIKQVLRDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLI
DIYRTLHRKSTEYTFFSAPHHTYSKIDHIVGSTALLSKCKRTEIITNCLSDHSAIKLELR
IKKLTQNCSTTWKLNNLLLNDYWVHNEMKAEIKTLFETSENKDTTYQNLWDTFKAVCRGK
FIALNAHRRKQERSKIDPLTSQLKELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQK
INESRSWFFEKINKIDRLLARLIKKKRKKNQIDAIKNDKGDITTNPTEIQTTIREYYKHL
YANKLENLEEMDKFLDT

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_3|1314_bp
atgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgct
ccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctat
attcaggagacctatctcatgtgcagagacacacataggctcaaaataaagggatgcagg
aagatctaccaagcaaatggaaaacaacgacaaaaaaaagcaggggttgcaatcctagtc
tctgataaaacagactttaaaccaacaaagatcagaagagacaaagaaggccattacata
atggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaat
acaggagaacccagattcataaagcaagtccttagagacctacaaagagacttagattcc
cacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagcagacctaata
gacatctacagaactctccaccgcaaatcaacagaatatacattcttttcagcaccacac
cacacctattccaaaattgaccacatagttggaagtacagcactcctcagcaaatgtaaa
agaacagaaattataacaaactgtctctcagaccacagtgcaatcaaattagaactcagg
attaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagacattatttgaaaccagtgag
aacaaagacacaacataccagaatctctgggacacatttaaagcagtgtgtagagggaaa
tttatagcactaaatgcccataggagaaagcaggaaagatctaaaattgaccccctaaca
tcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaagatcagagcagaactgaaggagatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagactgctagca
agactaataaagaagaaaagaaagaagaatcaaatagatgcaataaaaaatgataaaggg
gatatcaccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctc
tatgcaaataaactagaaaatctagaagaaatggataaattcctggacacataa

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_4|420_aa
MAASRLDFGEVETFLDRHPELFEDYLMRKGKQEMVEKWLQRHSQGQGALGPRPSLAGTSS
LAHSTCRGGSSVGGGTGPNGSAHSQPLPGGGDCGGVPLSPSWAGGSRGDGNLQRRASQKE
LRKSFARSKAIHVNRTYDEQVTSRAQEPLSSVRRRALLRKASSLPPTTAHILSALLESRV
NLPRYPPTAIDYKCHLKKHNERQFFLELVKDISNDLDLTSLSYKILIFVCLMVDADRCSL
FLVEGAAAGKKTLVSKFFDVHAGTPLLPCSSTENSNEVQVPWGKGIIGYVGEHGETVNIP
DAYQVFDGLGCEKQQDVLLDELRAGKGMTLKGYREPLSERVHTLLLCATAKTLEPRDVAI
AKCREAGKCSFNLTQSGPQPQSHPVTACRQSPGPLSGQPLQAATRPMVDGQAPKDDNLCA

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_4|1263_bp
atggcagcctcccgcctggactttggggaggtggaaactttcctggacaggcacccagag
ttgtttgaagattacttgatgcggaaggggaagcaggagatggttgaaaagtggctgcag
aggcacagtcagggtcagggggctttaggtccaaggccctctttggctggtaccagcagc
ttggctcacagcacctgcagaggtggcagcagcgttggtggtggcactggaccaaatggc
tctgcccacagccagccccttcccggtggcggggactgtggtggggttcccttgagtccc
agctgggccggtggcagcaggggcgatgggaacctgcagcggagagcttctcagaaagag
ctaaggaagagttttgcccgctccaaggccatccacgtgaacaggacctacgatgaacag
gtgacctcccgggctcaggaacccctgagtagtgtacgacggagggcacttctccggaag
gcaagctccctgccccccaccacagcccatattctcagtgcgctgctggaatcgagagtg
aatctgcctcggtatccccctacagccatcgactacaagtgccatctgaaaaagcataat
gagcgtcagttctttctggaattggtcaaagatatctccaatgaccttgacctcaccagc
ctgagctacaagattctcatctttgtctgccttatggtggatgctgaccgctgctctctt
ttcctggtggaaggggcagctgctggcaagaagaccttggtctccaaattctttgatgtg
catgcaggaacacctctgctgccttgcagcagcacagagaactcaaatgaggtgcaggtc
ccctggggcaaaggtatcattggctatgtcggggagcatggagaaacggtcaacattcct
gatgcctaccaggtgtttgatgggcttgggtgtgaaaagcagcaggatgttttgttagat
gaactgagagcaggaaaggggatgacgctgaagggttacagagaaccactaagtgagagg
gtgcacactctgttactctgtgcaactgctaagactctagaacccagggatgtggccata
gccaagtgcagggaggctggcaaatgtagcttcaacctgacccagagtgggccccagccc
cagtcccatccagtcactgcatgccgtcaaagtccagggcctttaagtggccagcccctg
caggcagccacccgacccatggtagatgggcaagccccaaaagatgacaacctctgtgcc
tga

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_5|701_aa
MVKSRKELEQKIQVLVLVPDLSRCQHRSSHLEQPPGQSPRLNFEAGDPERAPHALGCKRS
RTRATSDRQPMASRDPVPLLIGPQIPGRCRPLPGRPHPARLDSAWRRTPLSPGSGAPSRQ
RLGCETAAVADTAEAKSSEAPAFGWSTMDEAGSSASGGGFRPGVDSLDEPPNSRIFLVIS
KYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGP
NDTKPIKVRVPGSGCPRGKEWASWTSLHLLLCRGEGGVEHPFPAADQTAPGLGTGAALRR
GSPPTKLRRVAGKGTGCGVFAPRERTRQPRPPGDRTAVAGLPLSLALTNPPALEFTAKLV
LAYFEYFSDLPLSDAQISIYKKRKNSTFPQVFIAQSRSSGSHRDVEDEELTRIFVMIPKS
YTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRAILA
EPKNKASESSEQDYYSNMRQEALGHEPRVNMFPFGHGVVQYFNVASAIYAKYKLHGFQYP
PGNRIGVSFIDDGSNATEKMATQMVAAQLASMVWNNPSQQQFMQFGGSSGSQLPQIQTDV
VLPSCKKKAPAETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVYLVSGKNVGYAKYA
DRISANDAIATLHGKILNGVRLKVMLADSPREESNKRQRTY

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_5|2106_bp
atggtgaaaagccgcaaggaattggagcagaagatccaagttttggttctggtgccagat
ctctctaggtgtcaacacagaagcagtcacctggaacagccacctggccagagtccacgc
ctcaacttcgaggctggcgatccagaaagagcacctcacgccctgggctgcaagcgcagc
cggacgcgcgcgaccagtgatcgccagccaatggcaagccgggacccggtcccactgctg
attggcccccagatcccggggcgctgcaggccgctccccggaaggcctcatcctgcgcgg
ctggacagcgcctggcgccggactcctctttctcccggaagcggagcaccgagccggcaa
aggcttgggtgtgagacagcagcggtggcagacaccgcagaagcaaagagcagtgaggct
cctgcattcgggtggagcaccatggacgaagctggcagctctgcgagcggcgggggcttc
cgcccgggcgtggacagcctggacgaaccgcccaacagccgcatcttccttgtgatcagc
aagtacacacctgagtcggtgctgagggagcgcttctcgccttttggcgacatccaggac
atctgggtggtgcgggacaagcacaccaaggagtccaagggcattgctttcgtcaagttc
gcccgcagctcacaggcctgcagggccatggaggagatgcatggccagtgcctcggcccc
aacgacaccaagcccatcaaggtgcgggtgcccgggtcggggtgccctcgggggaaggag
tgggcctcttggacctcccttcacctgctgctctgccggggtgagggaggagtggaacat
ccgttcccggcagctgaccagacagcacctggcttggggacaggggctgctttgaggaga
ggctcccctcccacgaagctgcgccgggttgcagggaaggggacgggatgcggagtgttt
gccccacgagagcggacccggcagccgcggccaccgggtgacagaacagcagtggctggg
cttcccctctccctcgccctcactaatccaccagctcttgagttcactgccaaactcgtc
ctagcctactttgagtacttttctgaccttcctctctcagatgcccagatttccatatat
aaaaaacggaaaaactctacttttcctcaggttttcattgctcagtcccgatcatctgga
agtcaccgagatgttgaagatgaagaacttacaagaatctttgttatgataccaaagtcc
tacacagaagaagatctgcgggaaaaatttaaggtgtatggagatatcgagtattgcagc
attattaagaataaagtgactggagaaagtaaaggtttgggctacgtacgatacttaaaa
ccatcacaagctgcccaagcaatagaaaactgtgatcgaagttttagagcaatcttggct
gaacctaaaaataaagcatctgaatcctctgaacaagattattatagtaatatgaggcaa
gaagctttgggacatgaacctagagtaaatatgtttccatttggtcatggagtggttcag
tattttaatgtagcatcagctatttatgcaaaatacaaattacatggatttcagtaccct
cctgggaaccgaataggtgtttccttcattgatgatggaagtaatgcaacagaaaaaatg
gcaacacagatggtagctgcacagcttgcatcaatggtgtggaataacccaagtcagcaa
caatttatgcaatttggaggaagctctggatcacagttgcctcaaatccagacagatgtt
gtacttccatcatgcaaaaaaaaagctcctgctgaaactcctgtgaaagaaagacttttt
attgtgtttaatcctcatcctttacctttagacgtattagaagatatattctgtcgtttt
ggtaacctgatcgaagtttaccttgtgtcaggaaaaaatgtggggtatgccaagtatgcc
gatagaataagtgctaatgatgccattgccactctacatggaaagattctgaatggggtg
agacttaaagttatgctggcagattcgccaagagaagaatctaacaaacggcaaagaact
tactga

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_6|218_aa
MDGAGSHHPQQTNTGTENQTPHVLAHKCELNNENTWTQEGEQHIRGLSLLVRAGLKVLFP
KQQGMLWTRQPSAVSSFQEFPQLKRDSLPKVTVPFWGGLHPITGQCRDRYENASSSYKGA
AVVAAPLGEHSGMDSDQLHQLIPVLAITGEKGGPWWQKLQVFAAVISSERKEKWKVRITI
LDIFGSLAHLETIRNATAKVTLVNMSQTIPFLCMESYD

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_6|657_bp
atggatggagctggaagccatcatcctcagcaaactaacacaggaacagaaaaccaaaca
ccacatgttctcgctcataagtgtgagctgaacaatgagaatacatggacgcaggaaggg
gaacaacacatacggggtctgtccttgctggtgagggcaggactcaaggttttattcccc
aagcagcaaggaatgctgtggacaaggcagccctcagctgtcagttcctttcaggaattt
cctcagttgaagagagattccttgcctaaggtgacagtccctttctggggtggtctacat
ccaatcactggtcaatgcagagataggtatgagaatgccagctccagctacaagggggct
gcagtggtagctgctcctcttggagagcatagtggcatggactcagatcagctccatcag
ctgataccagtgttggcgataactggggagaagggtggtccttggtggcaaaagctgcag
gtgtttgcagcggtgatttccagtgagagaaaagagaaatggaaagtccgcattactata
ctggatatatttggaagccttgcccaccttgagactattcgcaatgcaacagccaaagtc
actctcgtaaacatgagtcaaaccattcccttcctctgcatggaatcctatgattaa

>gi568815596f:178012547_178226173|GENSCAN_predicted_peptide_7|188_aa
HLSNILNIQDRREYPPLGDQPDVSNRDLSVCPKKDSPNKRGQAETVILNLHLRTKSQEAD
LSTDGPHIWGTSPSGQDEGLNLSSCWRQPRSGQNIQRNSFQDIIRQQKTVIPKREERSEH
PRRHDLRAAPGLMQGKHVLTAMQTLSRSEPGKADLALAGGVDGGCREGCRGASSGFQDES
SSDLSDSD

>gi568815596f:178012547_178226173|GENSCAN_predicted_CDS_7|567_bp
catctcagcaacatcctaaacatccaagatcgacgagaatatccccctttaggagatcaa
cctgatgtcagcaacagagatttatctgtttgccctaagaaggactcacccaacaagaga
ggccaggcagaaactgttatcctgaatttacatctgaggacaaagagtcaagaggctgac
ttgtctacagatggaccacatatctgggggacttctccttctggccaagatgaaggactg
aatttatcttcctgttggagacaaccaagaagtggacaaaacatacaaagaaatagtttt
caagatattatcaggcaacaaaagacagtgatccccaagagagaggaaaggagtgagcat
ccccggcgacacgatctgcgggcagctcccggcttgatgcaggggaagcacgtcttgact
gcaatgcaaacgctgtcccggtctgaaccagggaaggcagacttggccctggccggggga
gtggacggaggctgccgggagggctgcaggggcgccagcagcggcttccaggatgagtcg
tcatctgacctgtctgacagcgactag