GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:37:31

Sequence gi568815581r:36095289_36296673 : 201385 bp : 45.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1628   1623    6                               1.05
 1.01 Sngl -   3187   2900  288  1  0   86   42   114 0.422   2.19
 1.00 Prom -   7496   7457   40                              -0.16

 2.00 Prom +   8053   8092   40                              -5.46
 2.01 Init +   8618   8693   76  1  1   68  108    85 0.985   7.77
 2.02 Intr +   9937   9996   60  2  0  110   45    46 0.041   1.21
 2.03 Intr +  16989  17077   89  1  2   69   39    46 0.036  -2.51
 2.04 Intr +  18066  18221  156  2  0   75   77    60 0.142   3.81
 2.05 Intr +  22437  22490   54  2  0  108   72    30 0.233   2.58
 2.06 Intr +  23704  23779   76  0  1   22  113    55 0.371   0.49
 2.07 Intr +  24000  24057   58  1  1  109  101    42 0.399   5.54
 2.08 Term +  25893  26007  115  0  1   53   44    78 0.248  -2.06
 2.09 PlyA +  27398  27403    6                               1.05

 3.00 Prom +  28295  28334   40                              -1.56
 3.01 Init +  34196  34307  112  1  1   68   72    69 0.537   3.67
 3.02 Intr +  52292  52407  116  0  2   68  109    20 0.083   2.27
 3.03 Intr +  54292  54423  132  0  0   91   72    21 0.021   1.64
 3.04 Intr +  61663  61713   51  0  0   62   79    51 0.049   0.70
 3.05 Term +  66325  66456  132  0  0  105   43   104 0.247   5.69
 3.06 PlyA +  67395  67400    6                               1.05

 4.14 PlyA -  67671  67666    6                               1.05
 4.13 Term -  69347  69190  158  0  2   95   39   129 0.728   6.80
 4.12 Intr -  71275  71063  213  2  0  101   49    71 0.634   3.19
 4.11 Intr -  72408  72256  153  1  0   85   80    82 0.818   7.14
 4.10 Intr -  72878  72779  100  2  1   91   89    78 0.700   7.88
 4.09 Intr -  74287  74235   53  2  2  100   38    77 0.764   2.53
 4.08 Intr -  74723  74603  121  2  1   92  110   146 0.994  17.27
 4.07 Intr -  75315  75267   49  2  1   97  117    62 0.988   8.68
 4.06 Intr -  76676  76567  110  2  2   92   82   150 0.999  13.88
 4.05 Intr -  77113  77006  108  1  0  107  101   162 0.994  19.88
 4.04 Intr -  77637  77557   81  0  0   52   92    42 0.599   0.83
 4.03 Intr -  78159  78120   40  2  1   80  116   -10 0.935  -0.77
 4.02 Intr -  79528  79443   86  1  2   81   79   118 0.921   8.82
 4.01 Init -  79762  79691   72  1  0   71   82    50 0.673   3.77
 4.00 Prom -  80355  80316   40                             -14.47

 5.00 Prom +  80581  80620   40                             -14.86
 5.01 Init +  81026  81077   52  1  1  123  105    85 0.997  15.02
 5.02 Intr +  83442  83474   33  1  0   80   82    35 0.546   0.29
 5.03 Intr +  84163  84301  139  2  1   70   59   125 0.809   7.32
 5.04 Intr +  87166  87290  125  1  2   94   84    22 0.735   2.63
 5.05 Intr +  87344  87688  345  0  0   29   59   283 0.436  14.86
 5.06 Term +  91867  91970  104  2  2   54   42    75 0.212  -2.06
 5.07 PlyA +  93343  93348    6                               1.05

 6.04 PlyA -  98729  98724    6                               1.05
 6.03 Term - 100088  99998   91  1  1  128   55    78 0.976   5.69
 6.02 Intr - 100624 100510  115  2  1  126  103   111 0.999  15.91
 6.01 Init - 101385 101310   76  0  1   82   94   103 0.940   9.66
 6.00 Prom - 114718 114679   40                              -0.66

 7.00 Prom + 115288 115327   40                              -7.66
 7.01 Init + 115854 115929   76  2  1   68  108    73 0.943   6.59
 7.02 Intr + 124475 124651  177  0  0   51   58    85 0.166   1.69
 7.03 Intr + 124992 125254  263  1  2   69   77   138 0.359   8.01
 7.04 Intr + 146411 146500   90  1  0  110    0    65 0.075   0.09
 7.05 Term + 154285 154416  132  0  0  105   43   163 0.842  11.59
 7.06 PlyA + 155355 155360    6                               1.05

 8.14 PlyA - 155631 155626    6                               1.05
 8.13 Term - 157306 157149  158  2  2   95   39    96 0.006   3.50
 8.12 Intr - 159234 159022  213  1  0  101   49    81 0.005   4.19
 8.11 Intr - 160349 160197  153  0  0   85   80    82 0.020   7.14
 8.10 Intr - 160819 160720  100  1  1   91   89    78 0.022   7.88
 8.09 Intr - 162225 162173   53  1  2  100   38    72 0.016   2.03
 8.08 Intr - 162661 162541  121  1  1   92  110   146 0.994  17.27
 8.07 Intr - 163253 163205   49  1  1   97  117    62 0.987   8.68
 8.06 Intr - 164611 164502  110  1  2  102   82   146 0.996  14.48
 8.05 Intr - 165048 164941  108  0  0   99  101   160 0.975  18.88
 8.04 Intr - 165572 165492   81  2  0   52   92    42 0.602   0.83
 8.03 Intr - 166094 166055   40  1  1   80  116   -10 0.939  -0.77
 8.02 Intr - 167463 167378   86  0  2   81   79   118 0.923   8.82
 8.01 Init - 167697 167626   72  0  0   71   82    55 0.663   4.27
 8.00 Prom - 173373 173334   40                              -3.26

 9.00 Prom + 173662 173701   40                              -6.96
 9.01 Init + 177451 177453    3  0  0   71  101     0 0.679  -0.40
 9.02 Intr + 178911 178995   85  2  1  131  116    54 0.949  11.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +   9240   9354  115  1  1   82   59    48 0.872   0.81
S.002 Term +   9937  10024   88  1  1  110   49    89 0.875   4.33
S.003 Term - 162225 162068  158  1  2  100   48   123 0.977   7.60
S.004 Init + 168961 169012   52  0  1  123  105    85 0.939  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_1|95_aa
MVSKSLWRKWEQKLDCELKKQIHNYPECRILQDEICRTMSWLEQLISDCHTLTTELASPT
LLTMEMDLRRLPQPALACERQRSGTSGNAKFLREG

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_1|288_bp
atggtgtccaagtcactttggaggaaatgggagcagaagctggattgtgaattgaagaaa
caaatacacaattatccagagtgcagaattcttcaggatgaaatctgtaggacaatgagc
tggttggagcagctcatcagtgactgtcacactctgactacggagctggccagccccacg
cttcttaccatggaaatggaccttcgtcgcctgccacaacctgctcttgcttgtgaaagg
cagaggtcaggaacttcaggcaatgctaaattcctgagagagggataa

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_2|227_aa
MKLCVTVLSLLMLVAAFCSPALSAPNSKPKEASKSVLIPVNPGSRKRAEIVEKQTQAFIM
QVADLQQKGHAQPHQGYINSPVLCHNLIQRDLEHFLLLQDITLVHYNDDIMMTRSSEQEV
ANTLDLLAVSMDDDDCWQNRGVVVKNSSPQAQATDWYWSMTCYEPSHTAEDGTIKLQENK
LRAPTDSTLCTMYNSKDMEPTQIAINDRRDKENVAYKHPGILRSHKK

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_2|684_bp
atgaagctctgcgtgactgtcctgtctctcctcatgctagtagctgccttctgctctcca
gcgctctcagcaccaaattccaaaccaaaagaagcaagcaagtctgtgctgatcccagtg
aatcctgggtccaggaaaagagctgaaattgtagaaaaacagacacaagcttttatcatg
caagtggctgacctgcaacaaaaggggcatgcacagcctcaccaggggtatatcaactct
ccggttttgtgtcataatcttattcagagagaccttgaacactttttgcttctgcaagat
atcacactggtccattacaatgatgacattatgatgactagatccagtgaacaagaagta
gcaaacacactggacttattggcagtgagcatggatgatgatgattgctggcaaaacagg
ggagtggtagtgaagaacagcagtccccaggcccaggccacagattggtactggtccatg
acctgttacgaaccgagccacacagcagaagatgggaccatcaagttgcaggaaaacaag
ctcagggctcccactgattctacattatgcactatgtacaatagcaaagacatggaacca
acccaaattgccatcaacgatagaagggataaagaaaatgtggcatataaacaccctgga
atactacgcagccataaaaaatga

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_3|180_aa
MEEVRVSWIEDQTSHNIPLSQNLIKALPVFNSVKAERSICVHQCRKDGDYKEGKCCIRKG
CWHIFVPPPQNLIPKQTHAFLLSAKSELEKTNSVPVGFPIFGWLAGLPPQPLSRLLSRSW
ASVCISEEKTGTVEGKTAVCEMFHVRGKQHIQIPKLSTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_3|543_bp
atggaggaagttcgagtgtcctggatagaagatcaaaccagccacaacattcccttaagc
caaaacctaatcaaagccctacctgtcttcaactctgtcaaggctgagagaagcatctgt
gtgcaccaatgcagaaaagacggggactacaaggaaggaaaatgttgcatcaggaagggc
tgctggcacatctttgttccccctccccaaaacctcatccccaagcagacccatgcgttc
ctgctctctgccaagtccgaactggagaaaacaaattctgtcccagtggggtttcccatc
tttggctggctggctggacttcctccacaaccactctctcgccttctaagcaggagctgg
gcttctgtgtgcatcagtgaagagaagacggggactgtggaagggaaaacagcagtctgt
gagatgtttcatgtccgaggcaaacagcacattcagatccccaagctctccacctccagt
gtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcctttggacctcagc
taa

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_4|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEM
KLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_4|1344_bp
atggacgtggtagaggtcgcgggtagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacattgaggaaatg
aagttgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacataagcgggacattaaggaagcatatgttcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcaggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaacgccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_5|265_aa
METKEPIVYTGSVERAPGPFGALATSSLDHTMEAGSPVGTTRASCDLQFLLPGVWGAHSG
EHGTPHTPHFEDAGRCERVDASTTCLHMCVCTCIVLAHLRVSRESGAQHVLAPAGTLSRR
RGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDGPG
FGVLSVPPHRVVAFSLGITPSRGAADPKSSMSSPRPAHRPRPRPLPRPDQRALEQCPLEK
AERSHPPCTRAAKNSHVPEYVSAAV

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_5|798_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgggcctttt
ggagccctggccacgtcctccctggatcacacgatggaagctggcagccccgtgggcacc
actcgagccagctgtgacctgcagtttctgcttcctggagtgtggggcgcccactcagga
gagcacggcacaccccacacccctcattttgaggatgctgggaggtgtgagcgagtggat
gcttccactacgtgtctgcacatgtgtgtgtgcacttgcattgtccttgcacacctgcgt
gtgtcccgtgagagcggagcccagcatgtgctggcacctgcaggaacattgtcacgacga
cgaggatggggaccatatcttcggagcctgaggatccaacacaggtccagccctgtgcag
ccgcccgccaagccgccagaggacgagccggacgccgaaggctacgagtggacgattgca
gttagtttccaactcgccgacttcgcgcccctccactggctccggcttgatggtcccggc
ttcggggtgctctcggtccctccccatcgcgtcgtcgctttctcccttggcataaccccc
agccgcggggccgcagaccctaagagctccatgagctctccgcgccctgcccaccggccc
cggccccgacccctccccagaccggaccagagagctttggaacaatgtcctctagaaaaa
gctgaacgtagccacccaccttgtacgagagccgcaaagaatagccatgtgcctgaatat
gtgtcagccgctgtgtga

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_6|93_aa
MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_6|282_bp
atgcaggtctccactgctgcccttgccgtcctcctctgcaccatggctctctgcaaccag
gtcctctctgcaccacttgctgctgacacgccgaccgcctgctgcttcagctacacctcc
cgacagattccacagaatttcatagctgactactttgagacgagcagccagtgctccaag
cccagtgtcatcttcctaaccaagagaggccggcaggtctgtgctgaccccagtgaggag
tgggtccagaaatacgtcagtgacctggagctgagtgcctga

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_7|245_aa
MKLCVTVLSLLVLVAAFCSLALSAPIKLGAYGGQVINGVLAQVQLTVGPVGPWIHPVVIS
PMTECVIGIDIFNSWQNPYIGSLTGIDLANAFFSIPVHKAHQKQFAFSWQGQQYTFTVLP
HGYINSPALRHNLIQRDLDHFLLLKDITLVHYNDIMMIGSSEQKVANTLDLLVETELKLI
CGDVLDVLDKHLIPAATTGKSKAVCEMFDVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQ
PLDRS

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_7|738_bp
atgaagctctgcgtgactgtcctgtctctcctcgtgctagtagctgccttctgctctcta
gcactctcagcaccaattaaattaggggcttatggaggtcaggtaattaatggagtttta
gctcaggtccaacttacagtgggcccagtgggtccctggattcatcctgtggtcatttcc
ccaatgacagaatgtgtaattggcatagatatattcaacagctggcagaacccctacatt
ggctccctgactggtattgacttagcaaatgcctttttctccattcctgtccataaggcc
caccagaagcaatttgccttcagctggcaaggtcagcaatatacctttactgtcctacct
cacgggtatatcaactctccagctttgcgtcataatcttattcagagagaccttgatcac
tttttgcttctgaaagatatcacactggtccattacaatgacattatgatgattggatcc
agtgagcaaaaagtagcaaacacactggacttattggttgagactgagctaaagttaatc
tgtggcgacgttctggatgtactggacaaacacctcattccagcagctacaactggcaag
tccaaggcagtctgtgagatgtttgatgtccgaggcaaacagcacattcagatccccaag
ctctacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacag
cctttggaccgcagctaa

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_8|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEM
KMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAAQAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNSIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_8|1344_bp
atggacgtggtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatg
aagatgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccaggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcgggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaactccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581r:36095289_36296673|GENSCAN_predicted_peptide_9|30_aa
MVRQATNQIVMNCADIDIITASYAPEGDEX

>gi568815581r:36095289_36296673|GENSCAN_predicted_CDS_9|90_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagnn