GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:18:01

Sequence gi568815581r:4182838_4466316 : 283479 bp : 45.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -    714    561  154  1  1   36   91   227 0.894  16.93
 1.10 Intr -   1073    975   99  0  0   17   95    75 0.404   1.18
 1.09 Intr -   2209   1981  229  1  1   68  115   203 0.667  18.44
 1.08 Intr -   6642   6545   98  1  2   36  106    65 0.703   2.83
 1.07 Intr -  12340  12141  200  0  2   84  103   202 0.999  20.29
 1.06 Intr -  12634  12566   69  0  0  130   60    80 0.896   7.70
 1.05 Intr -  14740  14536  205  2  1   97   99   250 0.998  25.26
 1.04 Intr -  23649  23484  166  0  1   33   75   155 0.994   8.23
 1.03 Intr -  25245  25096  150  0  0   74   84   175 0.999  16.06
 1.02 Intr -  27110  26987  124  1  1   92   92   176 0.942  18.99
 1.01 Init -  29387  29329   59  2  2   68   51     1 0.188  -4.82
 1.00 Prom -  31937  31898   40                              -7.46

 2.00 Prom +  32533  32572   40                              -3.46
 2.01 Init +  38967  39015   49  2  1   77   58    57 0.431   0.71
 2.02 Intr +  39258  39880  623  1  2  -35   49   384 0.264  14.20
 2.03 Intr +  40021  40149  129  0  0    1   67   123 0.787   2.39
 2.04 Intr +  40461  40946  486  2  0   60   52   370 0.871  23.81
 2.05 Term +  42761  42835   75  1  0   35   54    65 0.304  -4.36
 2.06 PlyA +  43650  43655    6                               1.05

 3.05 PlyA -  47799  47794    6                               1.05
 3.04 Term -  50134  49989  146  2  2   59   42   100 0.867   0.57
 3.03 Intr -  53053  52935  119  0  2   85   99    52 0.929   6.11
 3.02 Intr -  59611  59419  193  2  1  114   75   384 0.953  38.25
 3.01 Init -  80893  80758  136  1  1   95   74   172 0.250  14.81
 3.00 Prom -  87947  87908   40                              -5.46

 4.06 PlyA -  88014  88009    6                               1.05
 4.05 Term -  89679  89668   12  0  0  114   54     9 0.024  -1.70
 4.04 Intr - 106571 106393  179  0  2   57   91   119 0.893   8.74
 4.03 Intr - 113977 113880   98  0  2   63  115   -15 0.028  -1.65
 4.02 Intr - 124286 124184  103  0  1  114   83    94 0.191  10.73
 4.01 Init - 141281 141206   76  2  1   32  105    20 0.005  -0.65
 4.00 Prom - 152132 152093   40                              -2.16

 5.00 Prom + 175225 175264   40                              -2.96
 5.01 Init + 182605 183643 1039  0  1   91   70   217 0.412  12.55
 5.02 Intr + 213081 213271  191  1  2   58   47   172 0.469   9.40
 5.03 Term + 230422 230598  177  0  0   70   44   156 0.866   7.09
 5.04 PlyA + 234452 234457    6                               1.05

 6.00 Prom + 235943 235982   40                              -5.16
 6.01 Init + 251131 251329  199  0  1   83   94   110 0.696   8.98
 6.02 Intr + 253172 253320  149  0  2   57   64    85 0.703   2.95
 6.03 Intr + 253419 253518  100  2  1    8   55   110 0.481  -0.62
 6.04 Intr + 256821 256886   66  1  0  111   95    42 0.725   6.08
 6.05 Intr + 262195 262331  137  2  2   76   87   113 0.922  10.29
 6.06 Intr + 263211 263362  152  2  2   41   81   264 0.999  19.96
 6.07 Intr + 264059 264125   67  2  1  101   72    91 0.793   7.71
 6.08 Intr + 265318 265466  149  0  2  118   87   113 0.998  13.23
 6.09 Intr + 266398 266550  153  1  0   77   94   172 0.504  15.89
 6.10 Intr + 270179 270390  212  2  2   98   59   231 0.508  19.76
 6.11 Term + 275209 275231   23  2  2   95   50    34 0.279  -1.23
 6.12 PlyA + 276878 276883    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_1|518_aa
MVDVRKSRETILVVCDCPWRCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASH
WDDLRKEDFSSMSAQLLYKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEAD
HNGDLALDLALSRRLESIATTLVSHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGA
FVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHV
SIMAGNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTS
FDENSFAARLIQRGSHTDAPDTATGNCLLQRAAGAGNEAAALFLATNGAHVNHRNKWGET
PLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEAASLTSLADSVHLQTPLHMAIAY
NHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGA
AINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVS

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_1|1554_bp
atggtggatgtcaggaaatctcgtgaaaccatactagtcgtctgtgactgcccttggaga
tgtgagaagggtgttatgtctctagtgaatgtcaggaactgtattcgcttctaccagacg
gcagaggagctgaatgccagcacactgatgaactactgtgcagaaattattgcaagtcat
tgggacgacctgaggaaggaggatttcagcagcatgagcgctcagttgttatacaaaatg
atcaaatccaagacagagtacccgctacataaagccatcaaagtggagagagaagacgtg
gtcttcctgtatctgattgaaatggattcccagctccctgggaagctgaatgaagcggat
cataacggagatctggcattagatctagccctctcacgacgactggagagtattgccacc
acgctggttagtcacaaagctgatgtggacatggtggacaagagtggctggagcttgtta
cacaaaggaatccaaagaggagatctctttgctgccactttcctcattaagaatggggcc
tttgtcaacgctgctacactgggtgcccaggagacaccactgcaccttgtggccttgtac
agttcaaagaaacactcagcagatgtgatgtctgagatggcgcagattgcagaggccctt
ctgcaggctggtgccaaccccaacatgcaggacagcaaggggaggactcctttacatgtg
tccatcatggccgggaatgaatatgtgttcagtcagctgctgcagtgcaaacaactagat
ttagaactcaaagaccacgagggcagcacggctctgtggctggcagtgcagcatatcaca
gtgtcttctgaccagtctgtgaaccccttcgaagatgtccccgtggtaaatgggacttca
tttgatgagaacagctttgcagccagactcatccagcgcggcagccacacagacgcacct
gacacggcgacaggaaactgtttactacagcgggcagctggagcaggaaacgaggcagca
gctcttttcctggcaaccaacggtgcccatgtcaaccacagaaacaagtggggagaaacc
ccgttgcacacagcgtgtcggcatggcctggccaacctcacggcagagctcctgcagcaa
ggcgccaacccaaacctgcagacggaggaagctctgcctctgccaaaggaggccgcatcc
ctgaccagcttggcggacagcgtccatctgcagacgccactgcacatggcgatcgcctat
aaccatccggatgtggtgtctgtcatcctggagcagaaagccaatgctcttcatgccacc
aacaacttgcagatcattccggacttcagcctcaaagattcccgagaccagactgtgctg
ggcctggcattatggactggcatgcacacgatcgcagcccagctgctgggctctggagcc
gccatcaatgacaccatgtcggatgggcagacgctactgcacatggccatacagcggcag
gacagcaagagcgcactcttcctgctggagcaccaggcagatataaatgtcagn

>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_2|453_aa
MRFRHVGQAGLELLTSGVGGGAAGGQAPGGVAGVPRGQKAPPPPLLLPLLPAPGAAAPAA
PRTPELQSAAAGPSVSLYLSEDEVHRLIGLDAELYYVTNDLIIHYALSFNLLVPSETNFL
HFTWHSKSKVECKLGFQADNVLAMDLPQGNISVQGEVLRTLSVFRVELSCTGKVDSEVMI
LMQLNLTVNSSKNFTVLNFKPRKMCTKNGPDTQLQPLLRVFYIRTTQYPRADTPNNPTPI
TSSSGYPTLRIEKNDLRSVTLLEAKAKCKLVEANNPQAISQQDLVHMAIQIACGMSYLAR
TEVIHKDLAARNCITDDTLQVKITDNAVSWTITVWGTMKTGQFVGWLLKVWLITSFLALV
MCGAFGVMLWELMTLGQTPYMDTDPFEMAAYLKDGYRIAQPINCPDEPFAVMACCWALDP
GERPKFQQLLKILDRVQNNNDLKIWKSQQKQLN

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_2|1362_bp
atgaggtttcgccatgttggtcaggctggtctggaactcctgacctcaggggtaggcggc
ggtgcggcgggcggccaggcgccgggaggcgtggctggggtgccccgcggccagaaggcc
ccgccgccgccgctgctgctacccctgctgcccgcgcctggcgccgccgcccccgccgcc
ccgcggaccccggagctgcagtcggcggccgcggggcccagcgtgagcctctacctgagt
gaggatgaggtgcaccggctgatcggtcttgatgcagaactttattatgtgacaaatgac
cttattattcactacgctctgtcctttaatctgttagtacccagtgagacaaatttcctg
cacttcacctggcattcgaagtccaaggttgaatgtaagctgggattccaagcggacaat
gttttggcaatggacctgccccagggcaacatttctgttcagggagaagttctacgcact
ttatcagtatttcgggtagagctttcctgtactggcaaagtagattctgaagttatgata
ctaatgcagctcaacttgacagtcaattcttcaaagaattttaccgtcttaaattttaaa
ccaaggaaaatgtgcaccaaaaatggccctgacacgcagctccaaccacttctacgcgtg
ttttatattaggacgactcagtatccgagagctgacacacccaacaatccaactcctatc
accagctcctcaggttatcctaccttgcggatagagaagaacgacttgagaagtgtcact
cttttggaggccaaagccaagtgcaagttagtagaggccaataatccacaggcaatttct
caacaagacctggtacacatggctattcagattgcctgtggaatgagctacctggccaga
acggaagtcatccacaaagacctggctgctaggaactgtatcactgatgacacacttcaa
gttaagatcacagacaatgccgtctcatggactatcactgtctgggggacaatgaaaaca
ggccagtttgttggatggctcttgaaagtctggttaataacgagttttctagcactagtg
atgtgtggggcctttggagtgatgctgtgggaactcatgactctgggccagacgccctac
atggacactgaccccttcgagatggccgcatacctgaaagatggttaccgaatagcccag
ccaatcaactgtcctgatgaaccatttgctgtgatggcctgttgctgggccttagatccg
ggggagaggcccaagtttcagcagctgctaaaaattctggacagagtacaaaacaacaac
gacctaaagatttggaaaagtcaacaaaagcagctgaactga

>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_3|197_aa
MPTPRDCGRLRSRAGRSRAGAACSRGAPRAAREALDCRRCRDAGGKEVAKLEKHLMLLRQ
EYVKLQKKLAETEKRCALLAAQANKESSSESFISRLLAIVADLYEQEQYSDLKIKVGDRH
ISAHKFVLAARSDSWSLANLSSTKELDLSGHSDSVNVPQFYFNCEISTATKMNESGKNET
SLLSETKRHNTENYIKE

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_3|594_bp
atgccgaccccgcgggactgcggccggctgcggagccgggctggcaggtcccgcgccggt
gctgcgtgcagccgcggggccccgagggcagcacgggaggctcttgattgccggcggtgc
cgggacgccgggggaaaggaggtggccaagttggagaagcacttgatgcttctgcggcag
gagtatgtcaagctgcagaagaagctggcggagacagagaagcgctgcgctctcttggct
gcgcaggcaaacaaggagagcagcagcgagtccttcatcagccgtctgctggccatcgtg
gcagacctctacgagcaggagcagtacagcgatctgaagataaaggttggggacaggcac
atcagtgctcacaagtttgtcctggcagcccgcagtgacagctggagtctggctaacttg
tcttccactaaagagttggacctgtcaggtcactcagacagtgttaatgttcctcagttt
tattttaattgtgaaatatcgactgccaccaaaatgaatgagagtggcaaaaacgaaaca
tcgctgctctctgaaacaaaacgacacaacacagaaaattacatcaaggaataa

>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_4|155_aa
MVLNSNNYLVIARFLRCEDALSLFTELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLY
EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEER
WLPIHTVETIMISVISMLADPNGDSPANVDAAVSN

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_4|468_bp
atggttctaaattcgaacaattatttggtgattgccagatttctccgttgcgaagatgca
ttatctctttttactgaactcaacaaaaatccagtggaaggcttttctgcaggtttaata
gatgacaatgatctctaccgatgggaagtccttattattggccctccagatacactttat
gaaggtggtgtttttaaggctcatcttactttcccaaaagattatcccctccgacctcct
aaaatgaaattcattacagaaatctggcacccaaatgttgataaaaatggtgatgtgtgc
atttctattcttcatgagcctggggaagataagtatggttatgaaaagccagaggaacgc
tggctccctatccacactgtggaaaccatcatgattagtgtcatttctatgctggcagac
cctaatggagactcacctgctaatgttgatgctgcggtctccaattga

>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_5|468_aa
MGEGGRRLLGEADPAAAPGQSLRAQLRGLQACAAAGIAASTKPGAGQRAALPAARSYPPP
AGRRSRSPCQAEAGEAAIRTPPGSPAPSRPRGGRRGQRFCCRPQLRGPSAARGEVLCASP
IPPGPVPSARPQTPSRGLAAALGPDAPAGPEGPAAPAAPEPGTRPSKLAAPAWGPAHSPS
PATSYRTVGEGTSSSPTPRAPGPVPGPELGRVPAPSALQEPGENGWARPGPEPRGPHPRR
PGPLRQYGRWPGRRRGTGLRLSAIAAGPGAPPPACSPASCLRSSSADCSSVILPAEGPGW
RRGFRRAGDRLWGRLERGVPRNPGPATGAPEPRKAGLRRRERRLAAAVPDSHGHLVLVLG
STDTTATLKGTRNSTSISSQMVTVAAVSKEGVHSSSTDDKTETPRSQVTCVAPRRQTLKP
SVLGASLGGRFGPATERPLSEGSQLRLQRHLVATGHQTWDLPRGLPET

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_5|1407_bp
atgggggaggggggccgcaggctcctcggggaggccgacccggccgccgccccgggccag
agcctgcgggcgcagctccggggtttgcaggcctgcgcagcagccggaatcgcggcgagc
acaaagcccggagccggccagcgagcggctctccccgcggcccgctcctaccctccccca
gccgggcggcgcagccggagcccgtgccaggcggaggcaggcgaggcggcgatccgcact
ccgccagggtctccggcaccctcgcgcccgcgtggaggccgccgaggccagcgcttttgt
tgtcggccccaactccgcggacccagcgccgcccggggagaagttttgtgcgcctcacct
atcccgccagggccggtcccttccgcccgccctcagacaccgagccggggactcgcagcc
gcactgggtccggacgctccagccggccccgaaggtccggcggccccggcagcacctgaa
cccgggacccgcccctccaagctggcggccccggcctggggacccgcacacagcccctcc
cccgcaacgtcctacagaacggtgggggaggggacctcctcctctccgaccccccgggcg
ccaggcccagtccctgggccggagctgggtcgcgtccccgcccccagtgccctccaagag
ccgggcgagaacggctgggcccggccgggaccggagcctcgaggtccccaccctcgcagg
cccgggccccttcggcagtacggccgctggcccgggaggagaagagggactgggctgcgg
ctgtccgcgatcgcggccgggcccggcgccccgccgcccgcctgctcacctgccagctgt
cttcgcagtagcagtgccgactgcagctccgtcatcctccctgccgagggcccgggctgg
cgccggggcttccgaagggctggggacaggctctgggggcggctggagcggggtgtgccg
aggaacccgggccccgcgaccggagcgccggagccgaggaaggccgggctgaggcggcgg
gagcggcgcctcgctgccgcagttccagacagccacggccacctggtcctggtcctcggg
agtaccgacacaactgccaccctaaagggcaccaggaactctacctccatcagctcgcag
atggtcaccgtggcagctgtctctaaggagggtgttcactcctcttccacagatgacaaa
actgagactccaagaagccaagtgacttgtgtcgcccctagaaggcaaacgctgaagcca
agtgttcttggagcgtctcttggtggacgcttcggccctgccacggaacggccccttagt
gaaggttctcagcttagacttcagcgccacctggtggccaccgggcatcagacctgggac
ttgcctcgagggctgccagaaacttga

>gi568815581r:4182838_4466316|GENSCAN_predicted_peptide_6|468_aa
MAGGMSAECPEPGPGGLQGQSPGPGRQCPPPITPTSWSLPPWRAYVAAAVLCYINLLNYM
NWFIIADRLSTNCGQDPLLAAVDPGRKSDLEFLNSGMTISWGRDRGWLMAVLRGGELPAQ
HAREWLWNHETLGAAEPSPDLVIVFEELRGVLLDIQEVFQISDNHAGLLQTVFVSCLLLS
APVFGYLGDRHSRKATMSFGILLWSGAGLSSSFISPRYSWLFFLSRGIVGTGSASYSTIA
PTVLGDLFVRDQRTRVLAVFYIFIPVGSGLGYVLGSAVTMLTGNWRWALRVMPCLEAVAL
ILLILLVPDPPRGAAETQGEGAVGGFRSSWCEDVRYLGKNWSFVWSTLGVTAMAFVTGAL
GFWAPKFLLEARVVHGLQPPCFQEPCSNPDSLIFGALTIMTGVIGVILGAEAARRYKKVI
PGAEPLICASSLLATAPCLYLALVLAPTTLLASYVSESLYGECSDVLT

>gi568815581r:4182838_4466316|GENSCAN_predicted_CDS_6|1407_bp
atggctggggggatgtcagcggagtgccctgagcctgggccaggaggtctgcagggccag
tccccagggccaggcaggcagtgtccccctcccatcacgcccacctcctggagcctgccc
ccgtggagggcctacgtggctgccgccgtcctctgctacatcaacctcctgaattacatg
aactggttcatcattgcagaccggctgagcactaactgtgggcaggaccccctgctggct
gctgtggacccagggaggaaatcggacttggagttcctgaactcaggaatgaccatctca
tggggcagagatagaggctggttgatggcagtcctgcgaggcggagagttaccagctcag
catgccagagagtggctatggaatcatgaaactctaggggctgcagagccatccccagac
ctggtcatcgtctttgaggagctcagaggagtgctgctggatatacaggaggttttccag
atcagtgacaaccatgctggtttgcttcagactgtcttcgttagctgcctgctgctgtct
gcacctgtgtttggctacctgggcgaccgacatagccgcaaggctaccatgagcttcggt
atcttgctgtggtcaggagctggcctctctagctccttcatctccccccggtattcttgg
ctcttcttcctgtcccggggcatcgtgggcactggctcggccagctactccaccatcgcg
cccaccgtcctgggcgacctcttcgtgagggaccagcgcacccgcgtgctggctgtcttc
tacatctttatccccgttggaagtggtctgggctacgtgctggggtcggctgtgacgatg
ctgactgggaactggcgctgggccctccgagtcatgccctgcctggaggccgtggccttg
atcctgcttatcctgctggttccagacccaccccggggagctgccgagacacagggggag
ggggccgtgggaggcttcaggagcagctggtgtgaggacgtcagatacctggggaaaaac
tggagtttcgtgtggtcgaccctcggagtgaccgccatggcctttgtgactggagccctg
gggttctgggcccccaagtttctgctcgaggcacgcgtggttcacgggctgcagcctccc
tgcttccaggagccgtgcagcaaccccgacagcctgatttttggggcactgaccatcatg
accggcgtcattggggtcatcttgggggcagaagctgcgaggaggtacaagaaagtcatt
ccaggagctgagcccctcatctgcgcctccagcctgcttgccacagccccctgcctctac
ctggctctcgtcctggccccgaccaccctgctggcctcctatgtaagtgagagcctctat
ggagaatgctcggatgttctgacctga