GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:20:03

Sequence gi568815582r:19931738_20173616 : 241879 bp : 43.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  24202  24241   40                              -2.56
 1.01 Init +  24329  24457  129  1  0   78   99    98 0.974  10.05
 1.02 Term +  46098  46136   39  2  0   93   44    73 0.133   0.59
 1.03 PlyA +  47486  47491    6                               1.05

 2.06 PlyA -  48769  48764    6                               1.05
 2.05 Term -  56788  56756   33  1  0  108   42    13 0.097  -3.71
 2.04 Intr -  59336  59248   89  0  2   45   93    73 0.133   3.19
 2.03 Intr -  70785  70591  195  1  0   88  -16   155 0.285   4.49
 2.02 Intr -  73211  73086  126  0  0  130   57    81 0.389   9.85
 2.01 Init -  78102  78084   19  0  1   24  115    29 0.176  -0.59
 2.00 Prom -  97556  97517   40                              -4.06

 3.11 PlyA -  98440  98435    6                               1.05
 3.10 Term -  99786  99718   69  0  0   72   47   143 0.569   6.54
 3.09 Intr - 100932 100010  923  1  2  118    2  1169 0.563 102.26
 3.08 Intr - 109690 109634   57  2  0   56   98    39 0.137   0.56
 3.07 Intr - 125327 125241   87  0  0   85   15    95 0.078   1.84
 3.06 Intr - 141851 141753   99  0  0   24   94    67 0.076   0.98
 3.05 Intr - 142337 142165  173  1  2   53   59    97 0.060   2.89
 3.04 Intr - 150259 150121  139  2  1   45   62    53 0.221  -2.08
 3.03 Intr - 150363 150304   60  1  0  143   61    88 0.980  10.31
 3.02 Intr - 153158 153017  142  2  1   32  119    53 0.275   2.73
 3.01 Init - 156156 156136   21  0  0   84   62    12 0.149  -2.05
 3.00 Prom - 162155 162116   40                              -4.66

 4.03 PlyA - 164048 164043    6                               1.05
 4.02 Term - 171264 170706  559  2  1   47   42   986 0.091  83.72
 4.01 Init - 183789 183728   62  0  2   69  113    25 0.362   3.97
 4.00 Prom - 199011 198972   40                              -4.86

 5.05 PlyA - 199554 199549    6                               1.05
 5.04 Term - 204862 204703  160  0  1   51   55   108 0.475   1.21
 5.03 Intr - 205852 205768   85  2  1   83   89    50 0.517   3.48
 5.02 Intr - 210465 210342  124  0  1  102   96    41 0.893   6.46
 5.01 Init - 212238 212227   12  0  0   67   85    16 0.316  -1.56
 5.00 Prom - 212992 212953   40                              -2.46

 6.00 Prom + 217421 217460   40                              -4.06
 6.01 Init + 224003 224081   79  1  1   84   64    38 0.460   2.22
 6.02 Intr + 224452 224666  215  2  2   69   84   128 0.824   8.93
 6.03 Intr + 224714 224852  139  1  1   93   84    84 0.958   8.54
 6.04 Intr + 226527 226795  269  1  2   19   37   208 0.039   6.05
 6.05 Term + 240893 241003  111  1  0   97   45    32 0.006  -1.64
 6.06 PlyA + 241466 241471    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_1|55_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLTQEQKTKHRMFSLSTQGEDDKDEDL

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_1|168_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacatggatg
aagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatg
ttctcactctctactcaaggtgaagatgacaaggatgaagacctttaa

>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_2|153_aa
MLAEDPEVHLARCRESPVSMVEIAALSISSGFSCRRVEQSPDMPEKVAGRNGDEVCQLYS
PNCISSLKEGLVQNTCGPALRDGEAVMQAAEAQAACTFGGSGARDTASPGRSLELYNSSK
TMKGGDNPERCTREDIQPSLLLTPSLFEGMKGS

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_2|462_bp
atgctagcagaagacccagaggtgcaccttgcaaggtgcagagagtctcctgtcagcatg
gtggagatagcagccttgtccatcagctctggcttttcatgcaggcgagtggagcagagc
cccgacatgcctgagaaagtagccggccgaaatggagatgaagtctgccaactgtacagc
cctaattgcatttcctctctgaaagagggtctggtgcagaacacctgcggtccagcgcta
cgtgacggcgaggctgtcatgcaggcagcagaggcacaagcagcgtgcacattcgggggc
tctggggctcgagatacagccagtcctggcagatccctggagttgtacaatagctcaaag
acaatgaaaggtggtgataatccagaaaggtgcaccagagaggacatccagccatccttg
ctgctcactcctagcctttttgagggcatgaaaggatcataa

>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_3|589_aa
MRNMSAKPLDCLPAGLPGYSAFVIVAAWRNQPYLYIDESCFLYISVFYPRREDSGPYFLH
FVYDHSSYPDEIYPGGRQASNCGNIPILSAAAPDHLEKSVTSNKRLYPNSVRIVVHLKEL
LSNCIFSPESGAKRGGWDPLLFRIPPTPHTLRFQAAADWLRGAASQPPGFEAGVERVRAN
SSLSWWSPGSACGLGFVPVVYYSLLLCLGLPAWSLQLFQGTVSSFLIEDSPDIIPITLSP
RVLEIDLPKNPSLEHLPEAANILTVIILSQLVARRQKSSYNYLLALAAADILVLFFIVFV
DFLLEDFILNMQMPQVPDKIIEVLEFSSIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPA
RTRKVIVSVYITCFLTSIPYYWWPNIWTEDYISTSVHHVLIWIHCFTVYLVPCSIFFILN
SIIVYKLRRKSNFRLRGYSTGKTTAILFTITSIFATLWAPRIIMILYHLYGAPIQNRWLV
HIMSDIANMLALLNTAINFFLYCFISKRFRTMAAATLKAFFKCQKQPVQFYTNHNFSITS
SPWISPANSHCIKMLVYQYDKNGKPIKSRNDSKSSYQFEDAIGACVIIL

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_3|1770_bp
atgaggaacatgtcagccaagccactggattgcctacctgctggccttcctggctattct
gcttttgtcatcgttgctgcttggcggaaccagccttatctgtacattgatgagtcatgc
tttctgtacatttcagtgttttatccccgcagggaggattctggaccctatttccttcac
ttcgtctacgatcattcttcatatcctgatgaaatttacccaggaggcaggcaggcaagc
aattgtggaaatattcccatcctgtctgcagctgcccctgaccaccttgaaaagtcagtg
acaagcaacaaaaggctctatccaaactcggtaagaattgtcgtgcacctcaaagaactg
ttgtctaactgcatcttctcccctgaaagtggagccaagcgaggcggctgggaccccctc
ctcttccgcatccctcccaccccacacacactccgcttccaggcagccgctgattggctg
cggggagcggcgtcccagccccccggctttgaggcgggagtggagcgggtccgagccaac
agctcgctgtcttggtggtcccccggctcggcctgcggcttgggtttcgtgcccgtggtc
tactacagcctcttgctgtgcctcggtttaccagcatggtctttgcagctgtttcaagga
actgtgtcttccttcctgattgaagattctcccgacatcatccccattaccctctcccca
agagtcttagaaattgatcttcctaaaaatccatccttggagcacctcccagaagcagca
aatatcttgacagtgatcatcctctcccagctggtggcaagaagacagaagtcctcctac
aactatctcttggcactcgctgctgccgacatcttggtcctctttttcatagtgtttgtg
gacttcctgttggaagatttcatcttgaacatgcagatgcctcaggtccccgacaagatc
atagaagtgctggaattctcatccatccacacctccatatggattactgtaccgttaacc
attgacaggtatatcgctgtctgccacccgctcaagtaccacacggtctcatacccagcc
cgcacccggaaagtcattgtaagtgtttacatcacctgcttcctgaccagcatcccctat
tactggtggcccaacatctggactgaagactacatcagcacctctgtgcatcacgtcctc
atctggatccactgcttcaccgtctacctggtgccctgctccatcttcttcatcttgaac
tcaatcattgtgtacaagctcaggaggaagagcaattttcgtctccgtggctactccacg
gggaagaccaccgccatcttgttcaccattacctccatctttgccacactttgggccccc
cgcatcatcatgattctttaccacctctatggggcgcccatccagaaccgctggctggta
cacatcatgtccgacattgccaacatgctagcccttctgaacacagccatcaacttcttc
ctctactgcttcatcagcaagcggttccgcaccatggcagccgccacgctcaaggctttc
ttcaagtgccagaagcaacctgtacagttctacaccaatcataacttttccataacaagt
agcccctggatctcgccggcaaactcacactgcatcaagatgctggtgtaccagtatgac
aaaaatggaaaacctataaaaagtcgtaatgacagcaaaagctcctaccagtttgaagat
gccattggagcttgtgtcatcatcctgtga

>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_4|206_aa
MVKNWGLQSPASAELSPPTSTAQDLVKEINGNNHKNTKITEMVALAMILMEKGEEEEEDK
EEEEEEDNKVEEQEEEEQEEEEEEEDKEVEEQEEEEKEVEEQEEEEEEDKEVQEEEEEEE
EDAEVEEEKEDEEEEEKEEEEEEEVEEEEEKKEGEEDKMEEEEVEEKEKEEEKKEEEDKG
EEGSEHREECCQSLEYCSNRAGDVGK

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_4|621_bp
atggtaaagaactggggcctccaatcaccagccagtgccgaactgagcccaccaacaagc
actgctcaggacctggtgaaagagataaatggcaacaaccataaaaatacaaaaataact
gaaatggtagctctagcaatgatactgatggagaagggggaggaagaggaggaagataag
gaagaggaggaagaggaggataacaaggtagaggaacaggaagaagaggagcaggaggag
gaagaagaggaggaagataaggaggtggaggaacaagaagaggaggagaaggaggtggag
gaacaagaagaagaggaggaggaggataaggaagtgcaggaggaagaagaggaggaggaa
gaggatgcagaagtagaggaagagaaggaggacgaagaggaggaggagaaggaggaggag
gaagaagaggaggtggaggaagaggaggagaagaaagagggagaggaggataaaatggaa
gaggaagaggtggaagagaaagagaaggaggaggagaaaaaggaagaggaagacaaggga
gaggagggttctgaacacagggaagaatgctgtcaaagcctagaatattgctcaaatcgg
gcaggggatgtggggaaatag

>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_5|126_aa
MEMKSGSQALSYVLIRAEFPPPHSTVSGRRLCGVEDNRLCRQFQSVFLKVHKNHQEVELI
KTQIPAPFPEILLHLSFPQHSSWFPKARSKNFLEILEHHFLYILVVKASYMTTQIQGSGN
NFHLFV

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_5|381_bp
atggaaatgaagtctggcagtcaggctctgagctatgttctcattagagcagaatttccc
cctccacacagcacagtctctggacgaaggctctgtggagttgaggataatagactgtgc
cggcagttccaatcagtatttcttaaagtgcataagaatcaccaggaagtggagctgatt
aaaacacagattcctgccccattcccggagattctgcttcatttaagcttcccacagcac
agcagctggttcccaaaggcaagaagtaaaaacttcttggaaatcttagaacatcacttc
ttgtacattctagtggttaaagccagctacatgacaacccagattcaagggagtggaaac
aacttccacctcttcgtgtga

>gi568815582r:19931738_20173616|GENSCAN_predicted_peptide_6|270_aa
MNDSEGSVSSGDFSGAVLSHQPLSSSSGEGANTLKALCSHLLQQASAAVALLSPKAGSQG
LSLDTLKQAILPHTNILFTTSSPSPGLTPFAVKLDGTRAPGLVCFQSPFSTVALDPSKKG
KGKPLNISSVDVKPKDEVILYKDKLNMGPVLWNQDTSMLNGGLAKKTNEISVIQSGGVPT
LLVSLGVSFNINNATVSNADGFQLGISADMEKAGATGSIPKYQFSHFLEEDELVLWSPFS
NKLSPHGGKMVTSNSKLTSHSISNPNSSTV

>gi568815582r:19931738_20173616|GENSCAN_predicted_CDS_6|813_bp
atgaatgacagcgaggggtcagtgtcttcaggagacttctccggagctgtgctgagccac
cagccacttagttcaagcagtggggaaggggccaacaccctgaaggccttgtgcagccac
ctgctccagcaggcttctgcggctgtggctttgctcagcccaaaggctggaagccaaggt
ctgtctctggacaccttgaaacaagccatactacctcacaccaacatccttttcaccacc
agttctccatccccagggctgacgccctttgctgtgaagctggatgggaccagggccccg
ggattggtgtgcttccaaagtcctttctccactgtagcactagacccatccaagaaaggg
aaggggaagccactgaacatctcctcagtggatgttaaacccaaagacgaggtgatcctc
tacaaggacaagttgaacatgggccctgttttgtggaaccaggacaccagcatgctcaat
ggtggtctggccaagaagaccaatgagatctctgtgatccagagtggcggtgttcctacc
ctcctggtttccttgggagtcagcttcaatataaataacgccactgtctccaacgcggat
ggcttccaattaggtatcagtgcagatatggaaaaagcaggtgctactgggagcattccc
aaataccagttttctcacttcctggaagaagatgagcttgtgctgtggtctccattttca
aataagctctcccctcatggtggtaagatggttaccagcaattctaagctgacttctcat
tctatcagcaaccccaactcctcaacagtttga