GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:58:35

Sequence gi568815584f:19835667_20036599 : 200933 bp : 35.75% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2948   2943    6                               1.05
 1.03 Term -  12413  12298  116  0  2   40   44   109 0.402  -0.55
 1.02 Intr -  22652  22559   94  2  1   68   88    60 0.226   2.62
 1.01 Init -  30121  30053   69  1  0  112   72     6 0.228   2.52
 1.00 Prom -  32179  32140   40                              -3.65

 2.03 PlyA -  32191  32186    6                               1.05
 2.02 Term -  33377  32833  545  0  2   93   39   214 0.088  10.44
 2.01 Init -  51462  51390   73  0  1   81   42    61 0.104   2.08
 2.00 Prom -  55107  55068   40                              -5.55

 3.03 PlyA -  55422  55417    6                               1.05
 3.02 Term -  59034  58794  241  2  1  124   39   194 0.980  12.61
 3.01 Init -  60170  60103   68  2  2   89   70    10 0.687  -0.10
 3.00 Prom -  63065  63026   40                              -3.65

 4.02 PlyA -  63865  63860    6                               1.05
 4.01 Sngl -  64656  64384  273  0  0   74   44   189 0.954   8.18
 4.00 Prom -  66841  66802   40                              -8.25

 5.00 Prom +  71563  71602   40                              -7.05
 5.01 Sngl +  75841  76170  330  0  0   79   37   369 0.921  26.67
 5.02 PlyA +  76253  76258    6                               1.05

 6.00 Prom +  77843  77882   40                              -8.25
 6.01 Sngl +  78706  79110  405  0  0   60   43   202 0.801   8.93
 6.02 PlyA +  79361  79366    6                               1.05

 7.00 Prom +  90965  91004   40                              -6.35
 7.01 Sngl + 100241 100936  696  1  0   74   50   178 0.378   8.55
 7.02 PlyA + 101722 101727    6                               1.05

 8.00 Prom + 105964 106003   40                              -5.25
 8.01 Init + 112691 112697    7  1  1   42  119     0 0.508  -0.42
 8.02 Term + 120908 121356  449  0  2  122   43   185 0.973  11.79
 8.03 PlyA + 121805 121810    6                               1.05

 9.00 Prom + 128175 128214   40                              -3.65
 9.01 Init + 131809 131914  106  0  1   48   86    47 0.237   0.93
 9.02 Intr + 137749 137921  173  2  2   98   44    54 0.486   0.74
 9.03 Intr + 139895 140854  960  1  0  145    9   363 0.293  24.42
 9.04 Intr + 145133 145242  110  1  2   93   57    96 0.216   5.16
 9.05 Intr + 150047 150305  259  2  1   35   40   165 0.021   2.94
 9.06 Intr + 166482 166915  434  2  2   86  -14   192 0.012   0.32
 9.07 Term + 167109 167439  331  0  1   44   53   207 0.394   5.94
 9.08 PlyA + 168718 168723    6                               1.05

10.04 PlyA - 168988 168983    6                               1.05
10.03 Term - 179556 178595  962  1  2   65   44   344 0.003  18.93
10.02 Intr - 181096 180988  109  1  1  104   30    31 0.001  -2.16
10.01 Init - 198741 198214  528  0  0   93   83   142 0.151   9.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  73036  73509  474  0  0   56   36   211 0.933   6.60
S.002 Term +  86655  86774  120  2  0  101   36    79 0.857   1.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_1|92_aa
MAAVQSSLGWASEGDRAKRARARASTNCHICENARIAMQRNRFLETNRSFQSMGGRKSLG
GSCGGVVPDSNKNNDVGGEQKQKTYKSNHTTG

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_1|279_bp
atggcggcagtacagtccagcctcggctgggcatcagagggagaccgtgcaaagagggcg
agggcgagggcttccaccaactgccacatctgtgaaaatgcaagaattgcaatgcagagg
aacagatttctagaaaccaataggtcatttcagagtatgggaggtagaaagagccttgga
ggatcctgtggaggagtagtccctgacagtaataagaacaatgatgtaggaggtgagcaa
aagcagaaaacttataagagcaatcacaccactggttga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_2|205_aa
MAFIKSHKTDVGVDAEKRECSYTVVYAATVLGNLLIVVTIASEPHLHSPMYFLLGNLSFI
DMSLASFATPKMIADFLREHKAISFEGCMTQMFFLHLLGGAEIVLLISMSFDRYVAICKP
LHYLTIMSRRMCVGLVILSWIVGIFHALSQLAFTVNLPFCGPNEVDSFFCDLPLVIKLAC
VDTYILGVFMISTSGMIAWCASSSW

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_2|618_bp
atggctttcattaaaagtcataaaacagatgttggtgtggatgcagagaaaagggaatgc
tcatacactgttgtctatgcagccactgtgctggggaaccttcttattgtggtcaccatt
gcatcagagccacaccttcattcccctatgtactttctgctgggcaatctctccttcatt
gacatgtccctggcctcatttgccacccccaaaatgattgcagacttccttagagaacac
aaagccatctcttttgaaggctgcatgacccagatgttcttcctacatctcttagggggt
gctgagattgtactgctgatctccatgtcctttgataggtacgtggctatctgtaagcct
ctacattacctaacaatcatgagccgaagaatgtgtgttgggcttgtgatactttcctgg
attgtcggcatcttccatgctctgagtcagttagcatttacagtgaatctgcccttctgt
ggacccaatgaagtagacagtttcttttgtgacctccctttggtgattaaacttgcttgt
gttgacacatatattctgggggtgttcatgatctcaaccagtggcatgattgcctggtgt
gcttcatcctcttggtga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_3|102_aa
MKPSNCPPRTMQSWGNLPNKGKEPAWDQGGLALLLVPNSEIQCHLCERKMQVCHAPHSCR
SPLSQLKNPALTSEMPTAQMPTPPEHFSCGPDHFRKPNPTGT

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_3|309_bp
atgaagccaagtaactgcccacccaggaccatgcagagctgggggaatctccctaacaaa
ggaaaagagccagcatgggatcaaggaggtttggcacttttgcttgtccctaacagtgaa
atccagtgccacttgtgtgagaggaaaatgcaagtgtgccatgctccccacagctgccga
tctccattgtcccagctgaagaatcctgccctcaccagtgaaatgcccacagcacagatg
cccacccctcctgagcatttcagctgtggcccagatcacttcagaaaacccaaccccaca
ggcacatga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_4|90_aa
MTEDKWGESASHGKNRSKKEKEESQILKQPDLTERKLTYHQGDATKTFMRDSPPDSITSN
QALPPTLEITFRHEIWRGQTSKLYQVGSRS

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_4|273_bp
atgacagaggacaagtggggagaaagtgcatcacatggcaaaaacaggagcaagaaagag
aaagaggagtctcagattcttaaacaaccagatctcactgaacgaaaactcacttatcat
caaggggatgctactaagacattcatgagggactcacctcctgattcaatcacctccaac
caagccctacctccaacattggaaatcacatttagacatgagatttggaggggacaaaca
tccaaactatatcaagtgggatcaagatcctga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_5|109_aa
MRKKQRRKTGNSKNQSTSPPPKEHSSSPATEQSWMENDFDDLREEGFRRSNYSELKEEVR
TNGKEVKNLGKKLDEWLTGITNAEKSLKDLMELKTMTLELCDECTSLSS

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_5|330_bp
atgaggaaaaaacagagaagaaaaactggaaattctaaaaatcagagcacctctcctcct
ccaaaggaacacagctcctcaccagcaacggaacaaagctggatggagaatgactttgat
gacttgagagaagaaggcttcagacgatcaaactactccgagctaaaggaggaagttcga
accaatggcaaagaagttaaaaaccttggaaaaaaactagatgaatggctaactggaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccatgacactagaacta
tgtgatgaatgcacaagcctcagtagctga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_6|134_aa
MSELPFTIASKRINYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KKAILPKVIYRLNVIPIKLPMTFFTELEKTTLKFTWNQKRAHIAKSMLSQKNKAGGITLP
DFKLYYKPTVTKTA

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_6|405_bp
atgagtgaactcccattcacaattgcttcaaagagaataaactacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaaaggccatactgcccaaggtgatttatagattgaatgtcatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcacatggaaccaaaaaaga
gcccacattgccaagtcaatgctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaagcctacagtaaccaaaacagcatga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_7|231_aa
MLVDFFIERKTISFEGCMAQIFVLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMNRRL
CVIFVSISWAVGVLHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYEMEIMTL
TNSGLISLSCFLALIISYTIILIGVRCRSSSGSSKALSTLTAHITVVILFFGPCIYFYIW
PFSRLPVDKFLSVFYTVCTPLLNPIIYSLRNEDVKAAMWKLRNRHVNSWKN

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_7|696_bp
atgcttgtagacttttttattgagcgcaagactatctcctttgagggttgcatggcccag
atattcgttcttcacagttttgttgggagtgagatgatgttgcttgtagctatggcatat
gacagatttatagccatatgtaagcctctgcactacagtacaattatgaaccggaggctc
tgtgtaatttttgtgtctatttcctgggcggtgggcgttcttcattctgtgagccacttg
gcttttacagtggacctgccattctgtggtcccaatgaggtggatagcttcttttgtgac
cttcccttggtgatagagctggcttgcatggatacatatgaaatggaaattatgacccta
acgaacagtggcctgatatcattgagctgtttcctggctttaattatttcctacaccatc
attttgatcggtgtccgatgcaggtcctccagtgggtcatctaaggctctttctacatta
actgcccacatcacagtggtcattcttttcttcgggccttgcatttatttctatatatgg
ccttttagcagacttcctgtggacaaatttctttctgtgttctacactgtttgtactccc
ttgttgaaccccatcatctactctctgaggaatgaagatgttaaagcagccatgtggaag
ctgagaaaccgtcatgtgaactcctggaaaaactag

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_8|151_aa
MSDNFSSSDSVNGWSNKSVVTEFNLLGLSSSWELQVFFFFIFSVFYGAAVLGNILIIITV
IIDSHLHSPMYFLLSNLSSIDVCQATFATPKMIADFLNEHKTTTFQGCMSQIFFLHVFGG
SEMVLLVAMAYDRYIAICKPLHYMTIMNRRV

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_8|456_bp
atgtctgataacttcagcagctcagattcagttaatggatggagtaataaatcagtggtt
actgaattcaatttgttggggctgtctagctcttgggaactccaagtcttctttttcttt
atcttctctgtgttttatggagctgcagtgttgggaaacatccttatcatcatcacagta
attatagactctcatttgcattccccaatgtactttcttcttagcaatctctcttccatc
gatgtgtgtcaggctacatttgccactcccaagatgattgcagacttcctcaacgaacac
aagaccaccactttccagggatgcatgtcacaaatctttttcttgcatgtttttgggggt
agtgagatggtgcttcttgttgccatggcctatgatagatacattgctatatgcaaacct
ctgcactacatgaccatcatgaaccggagggtgtga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_9|790_aa
MQHKTKILERIKHKINIMINTFSSMEVLSTSQGSKAPEGLRRTLIPCAYGFALSDGVPMN
SYSLILLDFTSIHALGIQCSIYVTGLKGQDFWEVAEIKSLPKSMNETNHSRVTEFVLLGL
SSSRELQPFLFLTFSLLYLAILLGNFLIILTVTSDSRLHTPMYFLLANLSFIDVCVASFA
TPKMIADFLVERKTISFDACLAQIFFVHLFTGSEMVLLVSMAYDRYVAICKPLHYMTVMS
RRVCVVLVLISWFVGFIHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSL
LIVADSGFLSLSSFLLLVVSYTVILVTVRNRSSASMAKARSTLTAHITVVTLFFGPCIFI
YVWPFSSYSVDKVLAVFYTIFTLILNPVIYTLRNKEVKAAMSKLKSRYLKPSQGGNLAFL
GDLKGCSELKTFQELTNQSALVHPRADVWSRCGGSTPAENETVYALAFTRGGVQLPLPTQ
SGSTLTTEDRLQSCVSCTGGRGSTLTLIIVVAIREADPWPTKALCSELKDEDFTNKVEPD
QMDKNQTEVMREFFLSGFSQTPSIEAGLFVLFLFFYMSIWVGNVLIMVTVASDKYLNSSP
MYFLLGNLSFLDLCYSTVTTPKLLADFFNHEKLISYDQCIVQLFFLHFVGAAEMFLLTVM
AYDRYVAICRPLHYTTVMSRGGLISTISFVVLISSYTTILVKIRSKEGRRKALSTCASHL
MVVTLFFGPCIFIYARPFSTFSVDKMVSVLYNVITPMLNPLIYTLRNKEVKSAMQKLWVR
NGLTWKKQET

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_9|2373_bp
atgcaacacaagactaagatccttgagagaataaaacataagattaatattatgatcaac
acattttcctccatggaggtactttccacatctcagggcagcaaagcaccggagggtctc
cgtaggacactcattccttgtgcttatggctttgctctttctgatggagtacctatgaac
tcctattcactgattttgttagattttacttccattcatgccttagggattcaatgcagt
atttatgtcacaggattgaagggtcaggacttctgggaagtagctgaaattaagtccctt
ccaaaatcgatgaatgagacaaatcattctcgggtgacagaatttgtgttgctgggactg
tctagttcaagggagctccaacctttcttgtttcttacattttcactactttatctagca
attctgttgggcaactttctcatcatcctcactgtgacctcagattcccgccttcacacc
cccatgtactttctgcttgcaaacctgtcatttatagacgtatgtgttgcctcttttgct
acccctaaaatgattgcagactttctggttgagcgcaagactatttcttttgatgcctgc
ctggcccagattttctttgttcatctcttcactggcagtgaaatggtgctcctagtttcc
atggcctatgaccgttatgttgctatatgcaaacctctccactacatgacagtcatgagc
cgtcgtgtatgtgttgtgctcgtcctcatttcatggtttgtgggcttcatccatactacc
agccagttggcattcactgttaatctgccattttgtggtcctaataaggtagacagtttt
ttctgtgaccttcctctagtgaccaagttagcctgcatagacacttatgttgtcagctta
ctaatagttgcagatagtggctttctttctctgagttcctttctcctcttggttgtctcc
tacactgtaatacttgttacagttaggaatcgctcctctgcaagcatggcgaaggcccgc
tccacattgactgctcacatcactgtggtcactttattctttggaccatgcattttcatc
tatgtgtggcccttcagcagttactcagttgacaaagtccttgctgtattctacaccatc
ttcacgcttattttaaaccctgtaatctacacgctaagaaacaaagaagtgaaggcagct
atgtcaaaactgaagagtcggtatctgaagcctagtcaggggggaaacttagcatttctt
ggagacctgaaaggatgcagtgagcttaagactttccaagagcttaccaatcagtcagcc
cttgttcatccccgagcagatgtatggagcaggtgtggtggatccacccctgctgaaaat
gagactgtgtatgctctggctttcacaaggggtggggtccaactcccccttccaacacag
agtggcagcaccctgacaacagaggatagactacaaagttgtgtgtcctgtactggagga
agaggttctaccctgaccctcattatagtggtagccatcagagaggcagatccatggccc
acaaaggcactgtgctcggaactaaaggatgaagattttacaaacaaggtagagccagat
caaatggataaaaaccaaacagaagtgatgagagaatttttcttgtcagggttctcacag
acaccatctattgaagcagggctatttgtactatttcttttcttctatatgtccatttgg
gttggcaatgtcctcatcatggtcacagtagcatctgataaatacctgaattcatcaccc
atgtatttccttcttggcaacctctcatttctggacctatgttattcaacagtaacgacc
cctaagcttctggctgacttctttaatcatgaaaaactcatttcctatgaccaatgcatt
gtgcaactcttcttcctgcattttgtaggggcagctgagatgttcctgctcacagtgatg
gcgtacgatcgctatgttgcaatctgtcgcccgctgcactacaccactgtcatgagtcgg
ggtgggttgatctccaccatctcctttgtggtgctgatttcctcctacaccactatccta
gtcaagattcgctccaaggaaggaaggcgaaaggcactctccacgtgtgcctctcacctc
atggtggtaacactgttttttggaccctgtattttcatctacgctcgtcctttctctaca
ttttctgtggacaagatggtgtctgtactctacaatgttattaccccaatgctaaacccc
ctcatctacacacttcggaacaaagaggtaaagtcagccatgcagaagctctgggtcaga
aatgggcttacttggaaaaagcaggagacatga

>gi568815584f:19835667_20036599|GENSCAN_predicted_peptide_10|532_aa
MAIDRYVAICKPLHYMTIMSPRVLTGLLLSSYAVGFVHSSSQMAFMLTLPFCGPNVIDSF
FCDLPLVIKLACKDTYILQLLVIADSGLLSLVCFLLLLVSYGVIIFSVRYRAASRSSKAF
STLSAHITVVTLFFAPCVFIYVWPFSRYSVDKILSVFYTIFTPLLNPIIYTLRNQEFADY
GPYFQHIEIFYKSVSKSCQICAICKLANYTYPDYKQSLKPEAMDPQNYSLVSEFVLHGLC
TSRHLQNFFFIFFFGVYVAIMLGNLLILVTVISDPCLHSSPMYFLLGNLAFLDMWLASFA
TPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSMAYDRYVAICKPLHYMTLMS
WQTCIRLVLASWVVGFVHSISQVAFTVNLPYCGPNEVDSFFCDLPLVIKLACMDTYVLGI
IMISDSGLLSLSCFLLLLISYTVILLAIRQRAAGSTSKALSTCSAHIMVVTLFFGPCIFV
YVRPFSRFSVDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAMKKLQNRRVTFQ

>gi568815584f:19835667_20036599|GENSCAN_predicted_CDS_10|1599_bp
atggcaatagacaggtatgttgccatatgcaaacccctccattacatgaccatcatgagc
ccacgggtgctcactgggctactgttatcctcctatgcagttggatttgtgcactcatct
agtcaaatggctttcatgttgactttgcccttctgtggtcccaatgttatagacagcttt
ttctgtgaccttccccttgtgattaaacttgcctgcaaggacacctacatcctacagctc
ctggtcattgctgacagtgggctcctgtcactggtctgcttcctcctcttgcttgtctcc
tatggagtcataatattctcagttaggtaccgtgctgctagtcgatcctctaaggctttc
tccactctctcagctcacatcacagttgtgactctgttctttgctccgtgtgtctttatc
tacgtctggcccttcagcagatactcggtagataaaattctttctgtgttttacacaatt
ttcacacctctcttaaatcctattatttatacattaagaaatcaagagtttgctgattac
ggcccatatttccagcatattgaaatattctataagtctgtaagtaaatcgtgtcagatt
tgtgctatctgtaaacttgcaaattatacatatccagattacaaacaaagtctgaaacct
gaggcaatggacccacagaactattccttggtgtcagaatttgtgttgcatggactctgc
acttcacgacatcttcaaaattttttctttatatttttctttggggtctatgtggccatt
atgctgggtaaccttctcattttggtcactgtaatttctgatccctgcctgcactcctcc
cctatgtacttcctgctggggaacctagctttcctggacatgtggctggcctcatttgcc
actcccaagatgatcagggatttccttagtgatcaaaaactcatctcctttggaggatgt
atggctcaaatcttcttcttgcactttactggtggggctgagatggtgctcctggtttcc
atggcctatgacagatatgtggccatatgcaaacccttgcattacatgactttgatgagt
tggcagacttgcatcaggctggtgctggcttcatgggtcgttggatttgtgcactccatc
agtcaagtggctttcactgtaaatttgccttactgtggccccaatgaggtagacagcttc
ttctgtgacctccctctggtgatcaaacttgcctgcatggacacctatgtcttgggtata
attatgatctcagacagtgggttgctttccttgagctgttttctgctcctcctgatctcc
tacaccgtgatcctcctcgctatcagacagcgtgctgccggtagcacatccaaagcactc
tccacttgctctgcacatatcatggtagtgacgctgttctttggcccttgcatttttgtt
tatgtgcggcctttcagtaggttctctgtggacaagctgctgtctgtgttttataccatt
tttactccactcctgaaccccattatctacacattgagaaatgaggagatgaaagcagct
atgaagaaactgcaaaaccgacgggtgacttttcaatga