GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:16:33

Sequence gi568815584f:19820607_20021575 : 200969 bp : 35.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6834   7766  933  2  0   95   48   543 0.478  42.13
 1.02 PlyA +   7789   7794    6                               1.05

 2.06 PlyA -   7834   7829    6                               1.05
 2.05 Term -  13908  13591  318  0  0   39   47   171 0.472   2.00
 2.04 Intr -  15007  14946   62  2  2   74   91    49 0.194   1.33
 2.03 Intr -  27473  27405   69  0  0   40   83    94 0.107   2.34
 2.02 Intr -  37712  37619   94  2  1   68   88    60 0.228   2.62
 2.01 Init -  45181  45113   69  1  0  112   72     6 0.229   2.52
 2.00 Prom -  47239  47200   40                              -3.65

 3.03 PlyA -  47251  47246    6                               1.05
 3.02 Term -  48437  47893  545  0  2   93   39   214 0.088  10.44
 3.01 Init -  66522  66450   73  0  1   81   42    61 0.104   2.08
 3.00 Prom -  70167  70128   40                              -5.55

 4.03 PlyA -  70482  70477    6                               1.05
 4.02 Term -  74094  73854  241  2  1  124   39   194 0.980  12.61
 4.01 Init -  75230  75163   68  2  2   89   70    10 0.687  -0.10
 4.00 Prom -  78125  78086   40                              -3.65

 5.02 PlyA -  78925  78920    6                               1.05
 5.01 Sngl -  79716  79444  273  0  0   74   44   189 0.954   8.18
 5.00 Prom -  81901  81862   40                              -8.25

 6.00 Prom +  86623  86662   40                              -7.05
 6.01 Sngl +  90901  91230  330  0  0   79   37   369 0.921  26.67
 6.02 PlyA +  91313  91318    6                               1.05

 7.00 Prom +  92903  92942   40                              -8.25
 7.01 Sngl +  93766  94170  405  0  0   60   43   202 0.801   8.93
 7.02 PlyA +  94421  94426    6                               1.05

 8.00 Prom + 106025 106064   40                              -6.35
 8.01 Sngl + 115301 115996  696  1  0   74   50   178 0.378   8.55
 8.02 PlyA + 116782 116787    6                               1.05

 9.00 Prom + 121024 121063   40                              -5.25
 9.01 Init + 127751 127757    7  1  1   42  119     0 0.508  -0.42
 9.02 Term + 135968 136416  449  0  2  122   43   185 0.973  11.79
 9.03 PlyA + 136865 136870    6                               1.05

10.00 Prom + 143235 143274   40                              -3.65
10.01 Init + 146869 146974  106  0  1   48   86    47 0.237   0.93
10.02 Intr + 152809 152981  173  2  2   98   44    54 0.486   0.74
10.03 Intr + 154955 155914  960  1  0  145    9   363 0.293  24.42
10.04 Intr + 160193 160302  110  1  2   93   57    96 0.216   5.16
10.05 Intr + 165107 165365  259  2  1   35   40   165 0.021   2.94
10.06 Intr + 181542 181975  434  2  2   86  -14   192 0.012   0.32
10.07 Term + 182169 182499  331  0  1   44   53   207 0.394   5.94
10.08 PlyA + 183778 183783    6                               1.05

11.02 PlyA - 184048 184043    6                               1.05
11.01 Sngl - 194410 193655  756  1  0   24   44   400 0.262  23.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  88096  88569  474  0  0   56   36   211 0.933   6.60
S.002 Term + 101715 101834  120  2  0  101   36    79 0.857   1.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_1|310_aa
AREMESENRTVIREFILLGLTQSQDIQLLVFVLVLIFYFIILPGNFLIIFTIKSDPGLTA
PLYFFLGNLAFLDASYSFIVAPRMLVDFLSAKKIISYRGCITQLFFLHFLGGGEGLLLVV
MAFDRYIAICRPLHYPTVMNPRTCYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNF
FCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRIRGSSSEAKNKAM
STCITHIIVIFFMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKAS
MKKVFNKHIA

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_1|933_bp
gccagggaaatggaaagcgagaacagaacagtgataagagaattcatcctccttggtctg
acccagtctcaagatattcagctcctggtctttgtgctagttttaatattctacttcatc
atcctccctggaaattttctcattattttcaccataaagtcagaccctgggctcacagcc
cccctctatttctttctgggcaacttggccttcctggatgcatcctactccttcattgtg
gctccccggatgttggtggacttcctctctgcgaagaagataatctcctacagaggctgc
atcactcagctctttttcttgcacttccttggaggaggggagggattactccttgttgtg
atggcctttgaccgctacatcgccatctgccggcctctgcactatcctactgtcatgaac
cctagaacctgctatgcaatgatgttggctctgtggcttgggggttttgtccactccatt
atccaggtggtcctcatcctccgcttgcctttttgtggcccaaaccagctggacaacttc
ttctgtgatgtcccacaggtcatcaagctggcctgcaccgacacatttgtggtggagctt
ctgatggtcttcaacagtggcctgatgacactcctgtgctttctggggcttctggcctcc
tatgcagtcattctttgtcgcatacgagggtcttcttctgaggcaaaaaacaaggccatg
tccacgtgcatcacccatatcattgttatattcttcatgtttggacctggcatcttcatc
tacacgcgccccttcagggctttcccagctgacaaggtggtttctctcttccacacagtg
atttttcctttgttgaatcctgtcatttatacccttcgcaaccaggaagtgaaagcttcc
atgaaaaaggtgtttaataagcacatagcctga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_2|203_aa
MAAVQSSLGWASEGDRAKRARARASTNCHICENARIAMQRNRFLETNRSFQSMGGRKSLG
GSCGGVVPDSNKNNDVGAIPVQLKTFGGELVEAFRGKKIWSAIAEAKMRVPREPESALQA
GKNQAGALGEVSRPGGTKVVSALSDGKTALQNSCPTVPVGLKSPMKASQVWKDGHPWPCS
AIDVPATNPLGSISASVLLLPLF

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_2|612_bp
atggcggcagtacagtccagcctcggctgggcatcagagggagaccgtgcaaagagggcg
agggcgagggcttccaccaactgccacatctgtgaaaatgcaagaattgcaatgcagagg
aacagatttctagaaaccaataggtcatttcagagtatgggaggtagaaagagccttgga
ggatcctgtggaggagtagtccctgacagtaataagaacaatgatgtaggagccatccca
gttcagttaaaaacttttggtggagagctggtggaggcattcagaggaaagaagatatgg
tctgccattgcagaagctaagatgcgggtccccagggaacctgagtctgcactgcaagca
ggaaaaaaccaggctggagcactgggagaggtcagcagaccagggggtactaaggttgta
tctgccctatctgatgggaagactgccctgcagaattcatgtccgacagttcccgtaggg
ctaaagtctcctatgaaagcaagtcaagtctggaaggatgggcatccctggccatgctct
gctatagatgttcctgcaacaaaccctctgggctccatatcggctagcgtgctgctccta
ccactcttctaa

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_3|205_aa
MAFIKSHKTDVGVDAEKRECSYTVVYAATVLGNLLIVVTIASEPHLHSPMYFLLGNLSFI
DMSLASFATPKMIADFLREHKAISFEGCMTQMFFLHLLGGAEIVLLISMSFDRYVAICKP
LHYLTIMSRRMCVGLVILSWIVGIFHALSQLAFTVNLPFCGPNEVDSFFCDLPLVIKLAC
VDTYILGVFMISTSGMIAWCASSSW

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_3|618_bp
atggctttcattaaaagtcataaaacagatgttggtgtggatgcagagaaaagggaatgc
tcatacactgttgtctatgcagccactgtgctggggaaccttcttattgtggtcaccatt
gcatcagagccacaccttcattcccctatgtactttctgctgggcaatctctccttcatt
gacatgtccctggcctcatttgccacccccaaaatgattgcagacttccttagagaacac
aaagccatctcttttgaaggctgcatgacccagatgttcttcctacatctcttagggggt
gctgagattgtactgctgatctccatgtcctttgataggtacgtggctatctgtaagcct
ctacattacctaacaatcatgagccgaagaatgtgtgttgggcttgtgatactttcctgg
attgtcggcatcttccatgctctgagtcagttagcatttacagtgaatctgcccttctgt
ggacccaatgaagtagacagtttcttttgtgacctccctttggtgattaaacttgcttgt
gttgacacatatattctgggggtgttcatgatctcaaccagtggcatgattgcctggtgt
gcttcatcctcttggtga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_4|102_aa
MKPSNCPPRTMQSWGNLPNKGKEPAWDQGGLALLLVPNSEIQCHLCERKMQVCHAPHSCR
SPLSQLKNPALTSEMPTAQMPTPPEHFSCGPDHFRKPNPTGT

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_4|309_bp
atgaagccaagtaactgcccacccaggaccatgcagagctgggggaatctccctaacaaa
ggaaaagagccagcatgggatcaaggaggtttggcacttttgcttgtccctaacagtgaa
atccagtgccacttgtgtgagaggaaaatgcaagtgtgccatgctccccacagctgccga
tctccattgtcccagctgaagaatcctgccctcaccagtgaaatgcccacagcacagatg
cccacccctcctgagcatttcagctgtggcccagatcacttcagaaaacccaaccccaca
ggcacatga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_5|90_aa
MTEDKWGESASHGKNRSKKEKEESQILKQPDLTERKLTYHQGDATKTFMRDSPPDSITSN
QALPPTLEITFRHEIWRGQTSKLYQVGSRS

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_5|273_bp
atgacagaggacaagtggggagaaagtgcatcacatggcaaaaacaggagcaagaaagag
aaagaggagtctcagattcttaaacaaccagatctcactgaacgaaaactcacttatcat
caaggggatgctactaagacattcatgagggactcacctcctgattcaatcacctccaac
caagccctacctccaacattggaaatcacatttagacatgagatttggaggggacaaaca
tccaaactatatcaagtgggatcaagatcctga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_6|109_aa
MRKKQRRKTGNSKNQSTSPPPKEHSSSPATEQSWMENDFDDLREEGFRRSNYSELKEEVR
TNGKEVKNLGKKLDEWLTGITNAEKSLKDLMELKTMTLELCDECTSLSS

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_6|330_bp
atgaggaaaaaacagagaagaaaaactggaaattctaaaaatcagagcacctctcctcct
ccaaaggaacacagctcctcaccagcaacggaacaaagctggatggagaatgactttgat
gacttgagagaagaaggcttcagacgatcaaactactccgagctaaaggaggaagttcga
accaatggcaaagaagttaaaaaccttggaaaaaaactagatgaatggctaactggaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccatgacactagaacta
tgtgatgaatgcacaagcctcagtagctga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_7|134_aa
MSELPFTIASKRINYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KKAILPKVIYRLNVIPIKLPMTFFTELEKTTLKFTWNQKRAHIAKSMLSQKNKAGGITLP
DFKLYYKPTVTKTA

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_7|405_bp
atgagtgaactcccattcacaattgcttcaaagagaataaactacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaaaggccatactgcccaaggtgatttatagattgaatgtcatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcacatggaaccaaaaaaga
gcccacattgccaagtcaatgctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaagcctacagtaaccaaaacagcatga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_8|231_aa
MLVDFFIERKTISFEGCMAQIFVLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMNRRL
CVIFVSISWAVGVLHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYEMEIMTL
TNSGLISLSCFLALIISYTIILIGVRCRSSSGSSKALSTLTAHITVVILFFGPCIYFYIW
PFSRLPVDKFLSVFYTVCTPLLNPIIYSLRNEDVKAAMWKLRNRHVNSWKN

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_8|696_bp
atgcttgtagacttttttattgagcgcaagactatctcctttgagggttgcatggcccag
atattcgttcttcacagttttgttgggagtgagatgatgttgcttgtagctatggcatat
gacagatttatagccatatgtaagcctctgcactacagtacaattatgaaccggaggctc
tgtgtaatttttgtgtctatttcctgggcggtgggcgttcttcattctgtgagccacttg
gcttttacagtggacctgccattctgtggtcccaatgaggtggatagcttcttttgtgac
cttcccttggtgatagagctggcttgcatggatacatatgaaatggaaattatgacccta
acgaacagtggcctgatatcattgagctgtttcctggctttaattatttcctacaccatc
attttgatcggtgtccgatgcaggtcctccagtgggtcatctaaggctctttctacatta
actgcccacatcacagtggtcattcttttcttcgggccttgcatttatttctatatatgg
ccttttagcagacttcctgtggacaaatttctttctgtgttctacactgtttgtactccc
ttgttgaaccccatcatctactctctgaggaatgaagatgttaaagcagccatgtggaag
ctgagaaaccgtcatgtgaactcctggaaaaactag

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_9|151_aa
MSDNFSSSDSVNGWSNKSVVTEFNLLGLSSSWELQVFFFFIFSVFYGAAVLGNILIIITV
IIDSHLHSPMYFLLSNLSSIDVCQATFATPKMIADFLNEHKTTTFQGCMSQIFFLHVFGG
SEMVLLVAMAYDRYIAICKPLHYMTIMNRRV

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_9|456_bp
atgtctgataacttcagcagctcagattcagttaatggatggagtaataaatcagtggtt
actgaattcaatttgttggggctgtctagctcttgggaactccaagtcttctttttcttt
atcttctctgtgttttatggagctgcagtgttgggaaacatccttatcatcatcacagta
attatagactctcatttgcattccccaatgtactttcttcttagcaatctctcttccatc
gatgtgtgtcaggctacatttgccactcccaagatgattgcagacttcctcaacgaacac
aagaccaccactttccagggatgcatgtcacaaatctttttcttgcatgtttttgggggt
agtgagatggtgcttcttgttgccatggcctatgatagatacattgctatatgcaaacct
ctgcactacatgaccatcatgaaccggagggtgtga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_10|790_aa
MQHKTKILERIKHKINIMINTFSSMEVLSTSQGSKAPEGLRRTLIPCAYGFALSDGVPMN
SYSLILLDFTSIHALGIQCSIYVTGLKGQDFWEVAEIKSLPKSMNETNHSRVTEFVLLGL
SSSRELQPFLFLTFSLLYLAILLGNFLIILTVTSDSRLHTPMYFLLANLSFIDVCVASFA
TPKMIADFLVERKTISFDACLAQIFFVHLFTGSEMVLLVSMAYDRYVAICKPLHYMTVMS
RRVCVVLVLISWFVGFIHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSL
LIVADSGFLSLSSFLLLVVSYTVILVTVRNRSSASMAKARSTLTAHITVVTLFFGPCIFI
YVWPFSSYSVDKVLAVFYTIFTLILNPVIYTLRNKEVKAAMSKLKSRYLKPSQGGNLAFL
GDLKGCSELKTFQELTNQSALVHPRADVWSRCGGSTPAENETVYALAFTRGGVQLPLPTQ
SGSTLTTEDRLQSCVSCTGGRGSTLTLIIVVAIREADPWPTKALCSELKDEDFTNKVEPD
QMDKNQTEVMREFFLSGFSQTPSIEAGLFVLFLFFYMSIWVGNVLIMVTVASDKYLNSSP
MYFLLGNLSFLDLCYSTVTTPKLLADFFNHEKLISYDQCIVQLFFLHFVGAAEMFLLTVM
AYDRYVAICRPLHYTTVMSRGGLISTISFVVLISSYTTILVKIRSKEGRRKALSTCASHL
MVVTLFFGPCIFIYARPFSTFSVDKMVSVLYNVITPMLNPLIYTLRNKEVKSAMQKLWVR
NGLTWKKQET

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_10|2373_bp
atgcaacacaagactaagatccttgagagaataaaacataagattaatattatgatcaac
acattttcctccatggaggtactttccacatctcagggcagcaaagcaccggagggtctc
cgtaggacactcattccttgtgcttatggctttgctctttctgatggagtacctatgaac
tcctattcactgattttgttagattttacttccattcatgccttagggattcaatgcagt
atttatgtcacaggattgaagggtcaggacttctgggaagtagctgaaattaagtccctt
ccaaaatcgatgaatgagacaaatcattctcgggtgacagaatttgtgttgctgggactg
tctagttcaagggagctccaacctttcttgtttcttacattttcactactttatctagca
attctgttgggcaactttctcatcatcctcactgtgacctcagattcccgccttcacacc
cccatgtactttctgcttgcaaacctgtcatttatagacgtatgtgttgcctcttttgct
acccctaaaatgattgcagactttctggttgagcgcaagactatttcttttgatgcctgc
ctggcccagattttctttgttcatctcttcactggcagtgaaatggtgctcctagtttcc
atggcctatgaccgttatgttgctatatgcaaacctctccactacatgacagtcatgagc
cgtcgtgtatgtgttgtgctcgtcctcatttcatggtttgtgggcttcatccatactacc
agccagttggcattcactgttaatctgccattttgtggtcctaataaggtagacagtttt
ttctgtgaccttcctctagtgaccaagttagcctgcatagacacttatgttgtcagctta
ctaatagttgcagatagtggctttctttctctgagttcctttctcctcttggttgtctcc
tacactgtaatacttgttacagttaggaatcgctcctctgcaagcatggcgaaggcccgc
tccacattgactgctcacatcactgtggtcactttattctttggaccatgcattttcatc
tatgtgtggcccttcagcagttactcagttgacaaagtccttgctgtattctacaccatc
ttcacgcttattttaaaccctgtaatctacacgctaagaaacaaagaagtgaaggcagct
atgtcaaaactgaagagtcggtatctgaagcctagtcaggggggaaacttagcatttctt
ggagacctgaaaggatgcagtgagcttaagactttccaagagcttaccaatcagtcagcc
cttgttcatccccgagcagatgtatggagcaggtgtggtggatccacccctgctgaaaat
gagactgtgtatgctctggctttcacaaggggtggggtccaactcccccttccaacacag
agtggcagcaccctgacaacagaggatagactacaaagttgtgtgtcctgtactggagga
agaggttctaccctgaccctcattatagtggtagccatcagagaggcagatccatggccc
acaaaggcactgtgctcggaactaaaggatgaagattttacaaacaaggtagagccagat
caaatggataaaaaccaaacagaagtgatgagagaatttttcttgtcagggttctcacag
acaccatctattgaagcagggctatttgtactatttcttttcttctatatgtccatttgg
gttggcaatgtcctcatcatggtcacagtagcatctgataaatacctgaattcatcaccc
atgtatttccttcttggcaacctctcatttctggacctatgttattcaacagtaacgacc
cctaagcttctggctgacttctttaatcatgaaaaactcatttcctatgaccaatgcatt
gtgcaactcttcttcctgcattttgtaggggcagctgagatgttcctgctcacagtgatg
gcgtacgatcgctatgttgcaatctgtcgcccgctgcactacaccactgtcatgagtcgg
ggtgggttgatctccaccatctcctttgtggtgctgatttcctcctacaccactatccta
gtcaagattcgctccaaggaaggaaggcgaaaggcactctccacgtgtgcctctcacctc
atggtggtaacactgttttttggaccctgtattttcatctacgctcgtcctttctctaca
ttttctgtggacaagatggtgtctgtactctacaatgttattaccccaatgctaaacccc
ctcatctacacacttcggaacaaagaggtaaagtcagccatgcagaagctctgggtcaga
aatgggcttacttggaaaaagcaggagacatga

>gi568815584f:19820607_20021575|GENSCAN_predicted_peptide_11|251_aa
MYFLLGNLAFLDMWLASFATPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSM
AYDRYVAICKPLHYMTLMSWQTCIRLVLASWVVGFVHSISQVAFTVNLPYCGPNEVDSFF
CDLPLVIKLACMDTYVLGIIMISDSGLLSLSCFLLLLISYTVILLAIRQRAAGSTSKALS
TCSAHIMVVTLFFGPCIFVYVRPFSRFSVDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAM
KKLQNRRVTFQ

>gi568815584f:19820607_20021575|GENSCAN_predicted_CDS_11|756_bp
atgtacttcctgctggggaacctagctttcctggacatgtggctggcctcatttgccact
cccaagatgatcagggatttccttagtgatcaaaaactcatctcctttggaggatgtatg
gctcaaatcttcttcttgcactttactggtggggctgagatggtgctcctggtttccatg
gcctatgacagatatgtggccatatgcaaacccttgcattacatgactttgatgagttgg
cagacttgcatcaggctggtgctggcttcatgggtcgttggatttgtgcactccatcagt
caagtggctttcactgtaaatttgccttactgtggccccaatgaggtagacagcttcttc
tgtgacctccctctggtgatcaaacttgcctgcatggacacctatgtcttgggtataatt
atgatctcagacagtgggttgctttccttgagctgttttctgctcctcctgatctcctac
accgtgatcctcctcgctatcagacagcgtgctgccggtagcacatccaaagcactctcc
acttgctctgcacatatcatggtagtgacgctgttctttggcccttgcatttttgtttat
gtgcggcctttcagtaggttctctgtggacaagctgctgtctgtgttttataccattttt
actccactcctgaaccccattatctacacattgagaaatgaggagatgaaagcagctatg
aagaaactgcaaaaccgacgggtgacttttcaatga