GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:21:07

Sequence gi568815587r:58322335_58523261 : 200927 bp : 36.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  21480  21613  134  1  2   97   78    63 0.188   5.64
 1.02 Intr +  26627  26718   92  1  2  106   87    65 0.573   6.07
 1.03 Term +  26932  27040  109  1  1   46   43   107 0.561  -1.00
 1.04 PlyA +  27189  27194    6                              -0.45

 2.02 PlyA -  27675  27670    6                               1.05
 2.01 Sngl -  32165  31827  339  2  0   68   37   234 0.202  12.11
 2.00 Prom -  34621  34582   40                              -6.25

 3.03 PlyA -  34766  34761    6                               1.05
 3.02 Term -  36763  35791  973  0  1   79   39   379 0.805  22.63
 3.01 Init -  38223  38042  182  0  2   60   93   101 0.779   6.50
 3.00 Prom -  41318  41279   40                              -3.65

 4.00 Prom +  42050  42089   40                              -3.75
 4.01 Sngl +  48641  49522  882  1  0   42   43   378 0.980  24.47
 4.02 PlyA +  50891  50896    6                               1.05

 5.00 Prom +  51701  51740   40                              -3.85
 5.01 Init +  68588  68771  184  1  1   69   40   152 0.055   5.84
 5.02 Term +  77425  77708  284  2  2   66   43   155 0.151   3.40
 5.03 PlyA +  78434  78439    6                               1.05

 6.07 PlyA -  78864  78859    6                               1.05
 6.06 Term -  80339  80131  209  0  2   79   38    96 0.116   0.22
 6.05 Intr -  80890  80577  314  0  2   56   84   211 0.043  12.40
 6.04 Intr -  86946  86810  137  0  2   92   14   116 0.009   3.05
 6.03 Intr - 100742 100517  226  1  1   72   34   209 0.137  10.96
 6.02 Intr - 105772 105685   88  2  1   85  116    12 0.647   1.81
 6.01 Init - 106121 105968  154  2  1   94   49   112 0.748   8.09
 6.00 Prom - 110989 110950   40                              -5.55

 7.02 PlyA - 113061 113056    6                               1.05
 7.01 Sngl - 117817 116873  945  1  0   52   32   311 0.970  18.19
 7.00 Prom - 131279 131240   40                              -3.65

 8.00 Prom + 135354 135393   40                              -5.05
 8.01 Init + 135537 135612   76  2  1   83   99    54 0.723   7.30
 8.02 Intr + 144192 144280   89  1  2   53   40    53 0.032  -4.23
 8.03 Term + 161436 161657  222  2  0   91   43   165 0.709   8.23
 8.04 PlyA + 162553 162558    6                               1.05

 9.05 PlyA - 163027 163022    6                               1.05
 9.04 Term - 171420 171302  119  1  2   76   47    46 0.022  -2.98
 9.03 Intr - 173521 173441   81  2  0   46   86    85 0.025   2.79
 9.02 Intr - 183299 183135  165  0  0  120   86    27 0.264   4.71
 9.01 Init - 185771 184886  886  2  1  107  -19   480 0.281  33.82
 9.00 Prom - 186493 186454   40                              -6.45

10.03 PlyA - 188921 188916    6                               1.05
10.02 Term - 189521 189484   38  0  2  117   50    39 0.825  -0.48
10.01 Intr - 192325 192217  109  1  1   53   58   166 0.925   9.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_1|111_aa
XHMVHHGEDNSIKHSCNFVCVNGMTGAGLYMHEDNSPIEDGNCSEAVEHKVQHGDEHSIE
QGCHFICVHGMAGARLARHSHDWWNITEKVMDKIGLTERETEYVPNAEGGI

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_1|336_bp
naccacatggttcaccatggggaagacaatagtataaaacacagctgcaattttgtctgt
gtcaatggaatgactggagctgggctgtatatgcatgaagataatagtcccatagaagat
ggcaactgcagtgaggctgtagaacacaaggttcagcatggagatgaacacagcatagaa
caaggatgccatttcatctgtgtccatggaatggctggagctaggctagcaagacacagc
catgactggtggaacatcacagaaaaggtgatggacaagattggacttacagaaagagag
actgaatatgtccccaatgcggagggaggcatttag

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_2|112_aa
MDENCFVLSLYSHKGLIISGANTDVVVWDPEGTKIISASTLVQGGNFNLNENMCYYRMPL
LTIDPGGAVYENGIFMCTEGTGQTVSCGLSQLNHRKNTLNIKGVTVLPTWGM

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_2|339_bp
atggatgagaactgttttgttctcagcctgtattcccacaagggcctcatcatctctgga
gccaatactgatgtggtggtgtgggaccctgaaggcacaaagatcatctcagccagcacc
ttggtgcagggaggaaatttcaatctcaatgagaacatgtgctactaccgcatgcctctg
ctcaccatcgaccctgggggtgctgtgtatgagaatggcatcttcatgtgcactgagggc
actggacaaactgtctcctgtggtctttctcagctgaaccacagaaagaacaccttaaac
attaagggagtgactgtactccctacctggggtatgtag

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_3|384_aa
MNVLLTDSNSNKKIVHKHICSLQSAPKTTNLQPSISDILLSVESNDRKNVSKIKGDCFNT
RVSCDSKITSMENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLD
SHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYSACAAQMFFCAVFATVEN
YLLSSMAYDRYAAVCNPLHYTTTMTTRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSN
VIHHFFCDKPAVITLTCSEKHISELILVLISSFNVFFALLVTLISYLFILITILKRHTGK
GYQKPLSTCGSHLIAIFLFYITVIIMYIRPSSSHSMDTDKIASVFYTMIIPMLSPIVYTL
RNKDVKNAFMKVVEKAKYSLDSVF

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_3|1155_bp
atgaatgtccttctgacagattcaaattcaaataaaaagattgtgcataaacacatctgc
agcctacagtcagcccccaagactacgaacctccaaccctcaatatctgatatcctgcta
agtgttgagagtaatgacaggaagaatgtgtctaagataaaaggggattgtttcaacaca
agagtatcttgtgattctaaaataacatccatggagaataatacagaggtgagtgaattc
atcctgcttggtctaaccaatgccccagaactacaggttcccctctttatcatgtttacc
ctcatctacctcatcactctgactgggaacctggggatgatcatattaatcctgctggac
tctcatctccacactcccatgtacttttttctcagtaacctgtctcttgcaggcattggt
tactcctcagctgtcactccaaaggttttaactgggttgcttatagaagacaaagccatc
tcctacagtgcctgtgctgctcagatgttcttttgtgcagtctttgccactgtggaaaat
tacctcttgtcctcaatggcctatgaccgctacgcagcagtgtgtaaccccctacattat
accaccaccatgacaacacgtgtgtgtgcttgtctggctataggctgttatgtcattggt
tttctgaatgcttctatccaaattggagatacatttcgcctctctttctgcatgtccaat
gtgattcatcactttttctgtgacaaaccagcagtcattactctgacctgctctgagaaa
cacattagtgagttgattcttgttcttatatcaagttttaatgtcttttttgcacttctt
gttaccttgatttcctatctgttcatattgatcaccattcttaagaggcacacaggtaag
ggataccagaagcctttatctacctgtggttctcacctcattgccattttcttattttat
ataactgtcatcatcatgtacatacgaccaagttccagtcattccatggacacagacaaa
attgcatctgtgttctacactatgatcatccccatgctcagtcctatagtctataccctg
aggaacaaagacgtgaagaatgcattcatgaaggttgttgagaaggcaaaatattctcta
gattcagtcttttaa

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_4|293_aa
MIISIDAEKAFDKIQQRFMLKTRNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFAGDMIVYLENPIIS
AQILLKLMSNFSKVSAYKINVQKSQAFLYINNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKELFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPR
TFFTELEKTTLKFIWNQKRACIAKSILSQKNKAGGITLPDFKLYYKATVTKTA

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_4|882_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgcta
aaaactcgcaataaattaggtattgatgggacgtatttcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcaggtgacatgattgtatatctagaaaaccccatcatctca
gcccaaattctccttaagctgatgagcaacttcagcaaagtctcagcatacaaaatcaat
gtacaaaaatcacaagcattcttatacatcaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatatctaggaatccaacttaca
agggacgtgaaggaactcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaagg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatga

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_5|155_aa
MCSSSSLLCLSLHTSLQAEGAGSGLDQPRKGLPQCSGRLKGSSSTARVGTKAEEVPRASK
GCKSRLTEYWLFGFVLMWPQALKGFAYYWGSVGESVMAFVSSPSGNHQNVLTFGTKEASV
YTDYQFVPRLFTGSSKNRIEKGALYVAEDLFFCIP

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_5|468_bp
atgtgcagctccagttccctcctgtgcctctccctccacacctccctgcaagctgaggga
gccggctctggcctcgaccagcccaggaaggggctcccacagtgcagcggccggctgaag
ggctcctcaagcacggccagagtgggcaccaaggccgaggaggtgccgagagcgagcaag
ggctgtaagtcacgcttaactgagtactggctgtttggctttgtgctcatgtggccccag
gccctgaagggctttgcatattattggggctctgtaggtgaatcagttatggcctttgtc
tcaagtccaagtgggaatcaccagaatgtcttaacttttggcacaaaagaggcttcagtt
tatacagactatcagtttgtaccccgactattcacaggatccagcaagaataggatagag
aaaggtgccttatatgtggctgaagacttatttttctgtattccttga

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_6|375_aa
MACTSAGPYKVQRAILRPLKKRSSNKQSNCCYANDPMRERVHPRLHGLSRGSGFPIPLST
AEAHAILASPFWPCGFLLQSSNLSLVDFGYSSAVTPKVMAGFLRGDKVISYNACAVQMFF
FVALATVENYLLASMAYDRYAAVCKPLHYTTTMTASVVWLSEKLYVVTQRHLLMKVSSSV
SAPAGTLSLLIIIAGDEISGEYNLSLVDFCYSSAVTPIVMAGFLIEDKVISYNACAAQMY
IFVAFATVENYLLASMAYDRYAAVCKPLHYTTTMTTTVCARLAIGSYLCGFLNASIHTGD
TFSLSFFGIFYGTIIFMYLQPSSSHSMDTDKMAPVFYTMVIPMLNPLVYSLRNKEVKSAF
KKVVEKAKLSVGWSV

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_6|1128_bp
atggcatgtacaagtgctggcccttacaaggttcagagagcaatcctcagacctctgaag
aaacgctccagcaataagcagagcaactgctgctatgccaatgaccccatgagggaaaga
gtacatcctaggctccatggcctatcaaggggtagtggattcccaattccattgtccaca
gctgaagcccatgctattcttgcctctccattctggccatgtggattcctcctccaatca
agtaacctgtctctggtggactttggatactcctcagctgtcactcccaaggtcatggct
gggttccttagaggagacaaggtcatctcctacaatgcatgtgctgttcagatgttcttc
tttgtagccttggccacggtggaaaattacttgttggcctcaatggcctatgaccgctat
gcagcagtgtgcaaacccctacactacaccaccaccatgacggccagtgttgtctggcta
agtgaaaagctgtatgtggtcactcaaagacacctgctgatgaaggtatcatcatctgtt
tctgcacctgctggaacattaagccttttgattatcatagcaggagatgagataagtgga
gagtataacttgtctctagtggacttttgctactcttcagctgtcactcccatcgtcatg
gctggattccttatagaagacaaggtcatctcttacaatgcatgtgctgctcaaatgtat
atctttgtagcttttgccactgtggaaaattacctcttggcctcaatggcctatgaccgc
tatgcagcagtgtgcaaacccctacattacaccacaaccatgacaacaactgtgtgtgct
cgtctggccataggctcctacctctgtggtttcctgaatgcctccatccacactggggac
acatttagtctctctttcttcggcatcttctatgggactattatcttcatgtacttacaa
cccagctccagtcactccatggacacagacaaaatggcacctgtgttctatacaatggtc
atccccatgctgaaccctctggtctatagtctgaggaacaaggaagtgaagagtgcattc
aagaaagttgttgagaaggcaaaattgtctgtaggatggtcagtttaa

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_7|314_aa
MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFF
LSNLSLVDFGYSSAVTPKVMVGFLTGDKFILYNACATQFFFFVAFITAESFLLASMAYDR
YAALCKPLHYTTTMTTNVCACLAIGSYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAP
PLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFITIMKMRSPEGRQKAFSTCA
SHLTAVSIFYGTGIFMYLRPNSSHFMGTDKMASVFYAIVIPMLNPLVYSLRNKEVKSAFK
KTVGKAKASIGFIF

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_7|945_bp
atggagaacaacacagaggtgactgaattcatccttgtggggttaactgatgacccagaa
ctgcagatcccactcttcatagtcttccttttcatctacctcatcactctggttgggaac
ctggggatgattgaattgattctactggactcctgtctccacacccccatgtacttcttc
ctcagtaacctctccctggtggactttggttattcctcagctgtcactcccaaggtgatg
gtggggtttctcacaggagacaaattcatattatataatgcttgtgccacacaattcttc
ttctttgtagcctttatcactgcagaaagtttcctcctggcatcaatggcctatgaccgc
tatgcagcattgtgtaaacccctgcattacaccaccaccatgacaacaaatgtatgtgct
tgcctggccataggctcctacatctgtggtttcctgaatgcatccattcatactgggaac
actttcaggctctccttctgtagatccaatgtagttgaacactttttctgtgatgctcct
cctctcttgactctctcatgttcagacaactacatcagtgagatggttattttttttgtg
gtgggattcaatgacctcttttctatcctggtaatcttgatctcctacttatttatattt
atcaccatcatgaagatgcgctcacctgaaggacgccagaaggccttttctacttgtgct
tcccaccttactgcagtttccatcttttatgggacaggaatctttatgtacttacgacct
aactccagccatttcatgggcacagacaaaatggcatctgtgttctatgccatagtcatt
cccatgttgaatccactggtctacagcctgaggaacaaagaggttaagagtgcctttaaa
aagactgtagggaaggcaaaggcctctataggattcatattttaa

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_8|128_aa
MDEAGNPHSQQTNTETENQTQHVLTPAAGAPQSLNTIIIRRLTYLSREKSNSWELGLISF
YQGNCEIVLILEEQKHQCVTSVRVKGYGDQVINGALAQFCLTVGPMGPQTHPVVISPVLE
CVVGIDSS

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_8|387_bp
atggatgaagctggaaaccctcattctcagcaaactaacacagaaacagaaaaccaaaca
cagcatgttctcactccagcagctggagcacctcaaagcctgaacactataatcatcaga
aggctcacctacctgagtcgagaaaaatcaaacagctgggaactgggacttatttccttt
taccagggtaactgtgaaattgtactaattctggaagaacaaaaacatcagtgtgtcaca
tcagtcagagtaaagggttatggagatcaggtgatcaatggagctttagctcagttttgt
ctcacagtgggcccaatgggtccccaaacacatccagttgtcatttccccagttctggaa
tgcgtagttggaattgatagcagctag

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_9|416_aa
MENSTEVTEFILLGLTDDPNLQIPLLLAFLFIYLITLLGNGGMMVIIHSDSHLHTPMYFF
LSNLSLVDLGYSSAVAPKTVAALRSGDKAISYDGCAAQFFFFVGFATVECYLLASMAYDR
HAAVCRPLHYTTTMTAGVCALLATGSYVSGFLNASIHAAGTFRLSFCGSNEINHFFCDIP
PLLALSCSDTRISKLVVFVAGFNVFFTLLVILISYFFICITIQRMHSAEGQKKVFSTCAS
HLTALSIFYGTIIFMYLQPNSSQSVDTDKIASVFYTVVIPMLNPLIYSLRNKEVKTMRPI
QQHTGRTAFTGQDPLHIGIFLIEIYRAQEYLHLEKSLGSSYPSTGCIPISDEFRDLMLFA
VPAEFILEGTDSRTRQQGGTFISQDLLKSFRTGLSCLWSVLCPTYTAQVKRRERNH

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_9|1251_bp
atggagaatagcacagaagtgacagagtttatcctcttgggattaacagatgaccccaat
cttcagatacccctcctcctggcatttttattcatctacctcatcaccctgcttgggaat
gggggaatgatggtgatcatccactcagactcccatctccacactccaatgtactttttc
ctcagtaacctctcccttgtagacttgggttactcatcagctgtagcccccaaaacggtg
gctgcattgcggtcaggggacaaggccatctcctacgatggatgtgcagctcagttcttc
ttctttgtggggtttgccactgttgagtgctacctcctggcctccatggcctatgatcgc
catgcagcggtatgtaggcctcttcattacaccaccaccatgacagcaggtgtgtgtgcc
ctccttgctactggttcctatgtctctggcttcctcaatgcctctatccatgcagcaggc
accttcagactctccttctgtggttctaatgagattaatcatttcttctgtgacattccc
ccactcctggctctctcatgctctgacacacgcatcagcaagttggtggtctttgtggca
ggcttcaacgtctttttcaccctcctggtcatccttatttcttacttcttcatatgcatc
accattcagaggatgcattctgctgaagggcagaagaaagtcttctccacctgtgcttcc
catctcactgctttgtccatcttctatggcacaatcatcttcatgtacttacagcccaac
tccagccagtccgtggacacagacaaaatagcctctgtgttttacacagtggtgattccc
atgctgaatcccttgatatacagccttaggaacaaagaagtgaaaacaatgaggcctatt
cagcaacacacaggaagaacagcctttacaggccaggatccactgcatataggaatcttt
ctcattgaaatctacagagctcaagagtatctgcatttggagaagagcctgggaagcagc
tatccaagcactgggtgcattccaatctcagatgaatttcgtgaccttatgctctttgct
gtacctgcagaattcattttggagggcacagactctagaaccagacagcagggagggacc
ttcatatcccaggacctgctgaagtcattccgaacaggtttaagttgcctctggtctgtc
ctctgtcccacctacacagcacaagtaaaaaggagagagagaaaccactga

>gi568815587r:58322335_58523261|GENSCAN_predicted_peptide_10|48_aa
EIATTTSTFSKHHPDQSAAIKAPHRQKKKLQLTEGSDFKKSSVEAVLN

>gi568815587r:58322335_58523261|GENSCAN_predicted_CDS_10|147_bp
gagattgccacaaccacctcaaccttcagcaagcatcatcctgatcagtcagcagccatc
aaggcccctcaccggcaaaagaaaaaattacaactcactgaaggctcagacttcaaaaag
tccagtgttgaagcagttctgaattga