GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:33:21

Sequence gi568815587r:4947101_5055713 : 108613 bp : 36.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    940    935    6                               1.05
 1.01 Sngl -   8613   7672  942  0  0   61   42   302 0.787  19.19
 1.00 Prom -  17141  17102   40                              -7.05

 2.05 PlyA -  17259  17254    6                               1.05
 2.04 Term -  23853  23684  170  1  2   90   55   123 0.385   6.26
 2.03 Intr -  28328  28201  128  1  2   74   27    61 0.025  -2.00
 2.02 Intr -  42785  42598  188  2  2   71   82   104 0.017   5.67
 2.01 Init -  45018  44959   60  0  0   28  100    93 0.024   5.80
 2.00 Prom -  47636  47597   40                              -5.55

 3.00 Prom +  47700  47739   40                              -6.25
 3.01 Sngl +  51883  52830  948  0  0   69   42   459 0.969  35.71
 3.02 PlyA +  55007  55012    6                               1.05

 4.03 PlyA -  56011  56006    6                               1.05
 4.02 Term -  64498  64308  191  2  2   54   42   126 0.405   1.23
 4.01 Init -  68355  68280   76  0  1   80   78    73 0.460   6.80
 4.00 Prom -  72259  72220   40                              -5.85

 5.00 Prom +  76204  76243   40                              -2.75
 5.01 Init +  76773  76812   40  2  1  103  103     9 0.805   4.32
 5.02 Intr +  76857  77037  181  1  1   53   50    89 0.256  -0.40
 5.03 Intr +  78706  78842  137  1  2   36   77   100 0.309   2.99
 5.04 Intr +  90064  90344  281  2  2   -8   56   237 0.006   7.17
 5.05 Intr +  95391  95619  229  2  1  -18   33   270 0.031   7.42
 5.06 Term +  99487 100361  875  2  2   45   47   452 0.102  28.58
 5.07 PlyA + 102018 102023    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  44271  44396  126  1  0  107   59   100 0.867   8.73
S.002 Sngl +  99426 100361  936  2  0   53   47   477 0.846  36.32


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:4947101_5055713|GENSCAN_predicted_peptide_1|313_aa
MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHGP
MYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPETSSSACFAQEFFIHGFSVLESSVLLIM
SFDRFLAIHNPLRYTSILTTVRVAQIGIVFSFKSMLLVLPFPFTLRSLRYCKKNQLSHSY
CLHQDVMKLACSDNRIDVIYGFFGALCLMVDFILIAVSYTLILKTVPGIASKKEELKALN
TCVSHICAVIIFYLPIINLAVVHRFAGHVSPLINVLMANVLLLVPPLMKPIVYCVKTKQI
RVRVVAKLCQWKI

>gi568815587r:4947101_5055713|GENSCAN_predicted_CDS_1|942_bp
atgtccattatcaacacatcatatgttgaaatcaccaccttcttcttggttgggatgcca
gggctagaatatgcacacatctggatctctatccccatctgcagcatgtatcttattgct
attctaggaaatggcaccattctttttatcatcaagacagagccctccttgcatgggccc
atgtactattttctttccatgttggctatgtcagacttgggtttgtctttatcatctctg
cccactgtgttaagcatcttcctgttcaatgcccctgaaacttcttctagtgcctgcttt
gcccaggaattcttcattcatggattctcagtactggagtcctcagtcctcctgatcatg
tcatttgatagattcctagccatccacaatcctctgagatacacctcaatcctgacaact
gtcagagttgcccaaatagggatagtattctcctttaagagcatgctcctggttcttccc
ttccctttcactttaagaagcttgagatattgcaagaaaaaccaattatcccattcctac
tgtctccaccaggatgtcatgaagttggcctgttctgacaacagaattgatgttatctat
ggcttttttggagcactctgccttatggtagactttattctcattgctgtgtcttacacc
ctgatcctcaagactgtaccgggaattgcatccaaaaaggaggagcttaaggctctcaat
acttgtgtttcacacatctgtgcagtgatcatcttctacctgcccatcatcaacctggcc
gttgtccaccgctttgccgggcatgtctctcccctcattaatgttctcatggcaaatgtt
ctcctacttgtacctccgctgatgaaaccaattgtttattgtgtaaaaactaaacagatt
agagtgagagttgtagcaaaattgtgtcaatggaagatttaa

>gi568815587r:4947101_5055713|GENSCAN_predicted_peptide_2|181_aa
MLDPLDIIGTELEGSRVVIPALVTSTCKLECAYSTCIFLARWRCRTHQAPHSGAGVAEHA
SACQVGLSHSDGIVAGAVFVSPGLISEARLGSWRTLGLTGTKSLQLVVGPLDTPGLVFKA
DSHHTGLFTPFTPGRMLLHHGTILKAGWHQHHKPLRGLRISPSRAFADITTTGTGAQCLM
T

>gi568815587r:4947101_5055713|GENSCAN_predicted_CDS_2|546_bp
atgctggatcctttggatatcatcggcactgagctggaaggttctagggtcgtgatacca
gccttagtaacaagcacctgtaagttagagtgtgcttattccacttgcatcttcctggcg
agatggaggtgtcggacccatcaggcaccccacagtggggctggtgtagcagagcatgca
tctgcatgtcaagtaggtctgtcccattccgatggaattgttgcaggagctgtgtttgtg
tctcctggattaatatcagaagcaagacttgggagttggaggacactaggcctaacaggc
acaaaaagccttcagttggtagttggaccacttgacacacctggattagtgtttaaagca
gacagccatcatactggtctattcactcccttcaccccaggccgcatgctgttgcatcat
ggcaccattttgaaagcagggtggcaccagcaccataagcccctgcggggcctgagaatc
agcccatctagggcctttgctgatatcaccaccactggcaccggtgcacaatgcctgatg
acctga

>gi568815587r:4947101_5055713|GENSCAN_predicted_peptide_3|315_aa
MGDWNNSDAVEPIFILRGFPGLEYVHSWLSILFCLAYLVAFMGNVTILSVIWIESSLHQP
MYYFISILAVNDLGMSLSTLPTMLAVLWLDAPEIQASACYAQLFFIHTFTFLESSVLLAM
AFDRFVAICHPLHYPTILTNSVIGKIGLACLLRSLGVVLPTPLLLRHYHYCHGNALSHAF
CLHQDVLRLSCTDARTNSIYGLCVVIATLGVDSIFILLSYVLILNTVLDIASREEQLKAL
NTCVSHICVVLIFFVPVIGVSMVHRFGKHLSPIVHILMADIYLLLPPVLNPIVYSVRTKQ
IRLGILHKFVLRRRF

>gi568815587r:4947101_5055713|GENSCAN_predicted_CDS_3|948_bp
atgggagactggaataacagtgatgctgtggagcccatatttatcctgaggggttttcct
ggactggagtatgttcattcttggctctccatcctcttctgtcttgcatatttggtagca
tttatgggtaatgttaccatcctgtctgtcatttggatagaatcctctctccatcagccc
atgtattactttatttccatcttagcagtgaatgacctggggatgtccctgtctacactt
cccaccatgcttgctgtgttatggttggatgctccagagatccaggcaagtgcttgctat
gctcagctgttcttcatccacacattcacattcctggagtcctcagtgttgctggccatg
gcctttgaccgttttgttgctatctgccatccactgcactaccccaccatcctcaccaac
agtgtaattggcaaaattggtttggcctgtttgctacgaagcttgggagttgtacttccc
acacctttgctactgagacactatcactactgccatggcaatgccctctctcacgccttc
tgtttgcaccaggatgttctaagattatcctgtacagatgccaggaccaacagtatttat
gggctttgtgtagtcattgccacactaggtgtggattcaatcttcatacttctttcttat
gttctgattcttaatactgtgctggatattgcatctcgtgaagagcagctaaaggcactc
aacacatgtgtatcccatatctgtgtggtgcttatcttctttgtgccagttattggggtg
tcaatggtccatcgctttgggaagcatctgtctcccatagtccacatcctcatggcagac
atctaccttcttcttcccccagtccttaaccctattgtctatagtgtcagaacaaagcag
attcgtctaggaattctccacaagtttgtcctaaggaggaggttttaa

>gi568815587r:4947101_5055713|GENSCAN_predicted_peptide_4|88_aa
MNEVHLDQTSIEGDLPGMEPEDTEHGGITNISAERAISPARGQAMVMPTSQSRSPDYEVI
EKYSEDHVIKMKKMGLVDQNDVLKKFVL

>gi568815587r:4947101_5055713|GENSCAN_predicted_CDS_4|267_bp
atgaatgaagtacatttggaccagacaagcattgaaggagatctcccgggcatggaacca
gaagacactgaacatgggggaataactaacatcagtgctgaaagagctatttctcctgct
cgaggacaagcgatggtcatgccaacttcccaatccaggagtccagattatgaagtaatt
gagaagtattctgaggatcacgtgataaagatgaaaaaaatgggcttagtcgatcagaat
gacgtattaaaaaagtttgtgctctaa

>gi568815587r:4947101_5055713|GENSCAN_predicted_peptide_5|580_aa
MEPGEPPGYVVGSVFATLWSGDPLMNPPHQDLRSDTQSYMESQQTSCSGTCGALGALDTQ
AFLKNQLLFWQTRSDPQYPASQQVEPEAYASSAATPPHQLNTPSNSSSAFLGGGAPWGNL
IKAEQTLREPMFYFLAILSTIDLALSTTSVPRTLGIFWFDVHEINFGACVAQMFLIHAFT
GMEAEVLVAMAFDHYVAICNPLHYTNILTCRVLDSPLEITLRAFMIHGGDPNININGSLE
EAHSNLMDNVEGFKTSVEEAAADMVEIAREMELEVKPEDGTECCNLTTKGLEDFHMWISG
PFCSVYLVALLGNATILLVIKVEQTLREPMFYFLAILSTIDLALSTTSVPRMLGIFWFDA
HEINYGACVAQMFLIHAFTGMEAEVLLAMAFDRYVAVCAPLHYATILTSQVLVGISMCIV
IRPVLLTLPMVYLIYRLPFCQAHIIAHSYCEHMGIAKLSCGNIRINGIYGLFVVSFFVLN
LVLIGISYVYILRAVFRLPSHDAQLKALSTCGAHVGVICVFYIPSVFSFLTHRFGHQIPG
YIHILVANLYLIIPPSLNPIIYGVRTKQIRERVLYVFTKK

>gi568815587r:4947101_5055713|GENSCAN_predicted_CDS_5|1743_bp
atggagccaggggaacctcctggctatgtggtgggaagtgtctttgcaactctctggtca
ggagatccccttatgaacccaccccaccaggacctgcggtctgacacacagagctatatg
gagtctcagcagaccagctgctctggcacatgtggagccctgggagccttagatacccag
gctttcctgaaaaatcagctactattctggcaaaccaggagtgacccccaataccctgct
tcccaacaagtggagcctgaagcttatgccagcagtgcagctaccccaccccaccagctg
aacactcccagtaacagcagctctgcatttcttggaggtggagctccctggggcaacctc
atcaaggcagaacagaccctccgggagcccatgttctactttctggccatcctttccaca
attgatttggccctttctacaacctctgtgcctcgtacgctgggtatcttctggtttgat
gttcatgagattaactttggagcttgtgtggcccagatgtttctgatccatgccttcact
ggcatggaggctgaggtcctggtggccatggcctttgaccattacgtggccatctgcaat
ccacttcactacacaaacatcttgacatgccgggtgctggattcaccattggagataaca
ttaagagcatttatgattcatggaggagatccaaacatcaacattaacgggagtttggaa
gaagcccattccaacctcatggataacgttgaggggttcaagacttcagtggaggaagca
gctgcagatatggttgaaatagcaagagaaatggaattagaagtgaaacctgaagatgga
actgaatgctgcaatctcacgacaaaaggtctggaagacttccacatgtggatctccggg
cctttctgctctgtttaccttgtggctttgctgggcaatgccaccattctgctagtcatc
aaggtagaacagactctccgggagcccatgttctacttcctggccattctttccactatt
gatttggccctttctacaacctctgtgcctcgcatgctgggtatcttctggtttgatgct
cacgagattaactatggagcttgtgtggcccagatgtttctgatccatgccttcactggc
atggaggctgaggtcttactggctatggcttttgaccgttatgtggccgtctgtgctcca
ctacattacgcaaccatcttgacatcccaagtgttggtgggcattagcatgtgcattgta
attcgtcccgttttacttacacttcccatggtctatcttatctaccgcctacccttttgt
caggctcacataatagcccattcctactgtgagcacatgggcattgcaaaattgtcctgt
ggaaacattcgtatcaatggtatctatgggctttttgtagtttctttctttgttctgaac
ctggtgctcattggcatctcgtatgtttacattctccgtgctgtcttccgcctcccatca
catgatgctcagctaaaagccctaagcacgtgtggcgctcatgttggagtcatctgtgtt
ttctatatcccttcagtcttctctttccttactcatcgatttggacaccaaataccaggt
tacattcacattcttgttgccaatctctatttgattatcccaccctctctcaaccccatc
atttatggggtgaggaccaaacagattcgagaacgagtgctctatgtttttactaaaaaa
taa