GENSCAN 1.0	Date run:  3-Jul-120	Time: 20:34:43

Sequence gi568815575f:136548249_136759412 : 211164 bp : 40.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    341    619  279  0  0   97   66   208 0.334  16.03
 1.02 Intr +   2520   2599   80  1  2  131   66    13 0.468   1.75
 1.03 Intr +  16231  16332  102  0  0   52   44   105 0.054   1.95
 1.04 Intr +  17244  17432  189  2  0   89  113    23 0.712   3.76
 1.05 Term +  19023  19109   87  2  0  153   43    67 0.971   5.38
 1.06 PlyA +  19482  19487    6                               1.05

 2.05 PlyA -  19642  19637    6                               1.05
 2.04 Term -  28178  28097   82  1  1   72   53    95 0.299   0.59
 2.03 Intr -  29727  29615  113  0  2   64   74   128 0.606   7.26
 2.02 Intr -  35924  35866   59  0  2   64  115    48 0.403   2.78
 2.01 Init -  46350  46251  100  0  1   71  100    65 0.731   6.47
 2.00 Prom -  59233  59194   40                              -5.35

 3.03 PlyA -  59678  59673    6                               1.05
 3.02 Term -  61826  61616  211  1  1    1   50   191 0.110   2.38
 3.01 Init -  83149  83007  143  1  2   12   99   148 0.819   7.95
 3.00 Prom -  86644  86605   40                              -7.35

 4.00 Prom +  89219  89258   40                              -5.15
 4.01 Init +  89664  89719   56  2  2   83   45   113 0.749   5.31
 4.02 Intr +  99561  99777  217  0  1   73   -8   118 0.022  -1.72
 4.03 Intr + 100106 100156   51  1  0   86  116    17 0.224   2.49
 4.04 Intr + 102018 102149  132  2  0   82  121   117 0.998  14.32
 4.05 Intr + 102411 102592  182  2  2   21   52   221 0.893   9.54
 4.06 Intr + 109216 109284   69  1  0   87   56    84 0.341   2.48
 4.07 Intr + 109653 109702   50  0  2   80   82    27 0.419  -1.29
 4.08 Term + 110791 111167  377  2  2   95   47   328 0.886  23.32
 4.09 PlyA + 112122 112127    6                               1.05

 5.19 PlyA - 112361 112356    6                               1.05
 5.18 Term - 119921 119781  141  2  0   90   41   131 0.878   5.55
 5.17 Intr - 121288 121234   55  0  1  105   90    83 0.990   8.26
 5.16 Intr - 123871 123772  100  2  1  104   87   165 0.993  16.25
 5.15 Intr - 126848 126759   90  0  0   40   58    95 0.492   0.75
 5.14 Intr - 128469 128376   94  0  1   92   53    78 0.901   3.32
 5.13 Intr - 132628 132483  146  2  2    2   84   134 0.940   3.48
 5.12 Intr - 133720 133642   79  1  1   72   82    57 0.953   1.71
 5.11 Intr - 134596 134510   87  1  0   93   92    82 0.993   8.35
 5.10 Intr - 137575 137429  147  1  0   70   94    88 0.967   7.11
 5.09 Intr - 142500 142362  139  2  1   49   94    99 0.475   6.15
 5.08 Intr - 158782 158660  123  0  0  105   99   -10 0.131   0.58
 5.07 Intr - 160522 160427   96  0  0   70  106    77 0.929   5.91
 5.06 Intr - 165122 165028   95  2  2  112   71   103 0.955   8.84
 5.05 Intr - 183924 183854   71  1  2   85  103    47 0.581   3.88
 5.04 Intr - 195538 195337  202  1  1   82  103   104 0.811   9.24
 5.03 Intr - 197099 196975  125  0  2  120  103    74 0.999  11.48
 5.02 Intr - 199344 199260   85  0  1   67  121    90 0.933   8.67
 5.01 Init - 207437 207432    6  2  0   86  100    10 0.402   2.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:136548249_136759412|GENSCAN_predicted_peptide_1|245_aa
XDSMSPNQWRYSSPWTKPQPEVPVTNRAANCNLHVPGPMAVNQFSPSLARRASVRPGELW
HFSSLAGTSSLEPGYSHPFPARHLVPEPQPDGKHKKLYVSRGSASTSLPNESRYLGQPLM
EPHPMAATSTGPWGVLPGYHRCPLKAQGLFSHLVGSTEFNPISHNPCALPLPSAQILSPP
HTAAPWGWGRGSISDSRLSSLPSSSASFSDMKLKPGTVLLTRPHKPLTPLTPQLLLSGGP
ADTRI

>gi568815575f:136548249_136759412|GENSCAN_predicted_CDS_1|738_bp
natgatagcatgtctccaaatcagtggcgttactcgtctccatggacaaagccacaacca
gaagtacctgtcacaaaccgtgccgccaactgcaacttgcatgtgcctggtcccatggct
gtgaatcagttctcaccgtccctggctaggagggcctctgttcggcctggggagctgtgg
catttctcctccctggcgggcaccagctccttagagcctggctactctcatcccttcccc
gctcggcacctggttccagagccccagcctgatgggaaacataagaaactatatgtatct
cgtggatctgccagtaccagccttccaaatgaaagtaggtatctgggccagcctttgatg
gagccacaccccatggctgccaccagcacaggcccatggggagtactgccaggttaccac
cgatgtcctcttaaggcccaagggctcttcagtcatcttgtgggcagcacagagttcaat
ccaatatctcacaatccctgtgctcttcctctcccaagtgcacagattctctctccaccc
cacacagctgctccatggggatggggaaggggtagcatcagcgattcaagactgtcttcc
ctaccctcttccagtgcctctttcagcgatatgaagttaaaaccaggtacggtgttactt
accaggccccataaacccctcacacctttaactcctcagctcctgctttctggaggacct
gctgatacaaggatatag

>gi568815575f:136548249_136759412|GENSCAN_predicted_peptide_2|117_aa
MAKGSSLKNKKMLTKGDMDLQKGRKNNGIGKNRSYEPEQHVAMLNTVGNGNTMTELAKDE
DQNLSSLTPWHLAQNVAPSSEPGTERALNKRSIPEPTTLTDTGSQEAELFTQGHTVG

>gi568815575f:136548249_136759412|GENSCAN_predicted_CDS_2|354_bp
atggctaaaggaagttctctaaagaacaagaaaatgttaacaaaaggagatatggacctt
cagaaaggaaggaagaataatggaattggtaaaaatagaagctacgaacctgaacagcat
gttgctatgttgaatactgtaggcaatgggaacacaatgactgagcttgccaaggatgag
gaccaaaacttgtcatctctgactccgtggcacctagctcagaacgtggcacctagctca
gaacctggcaccgaaagggcactcaataaaaggtccatccccgagcccactactctaact
gacactggctcccaggaagctgagctgtttacccaaggtcacacagttggatga

>gi568815575f:136548249_136759412|GENSCAN_predicted_peptide_3|117_aa
MKNEREPEKNSCVYICFDLPKAYRYVQEAKEPLQLHKKLWKAIKLMPRHGARSTVRGHVW
TKVLRRSVSRKRRMEQVYCEEQRHQEKYHGPLEREPEIVAALLPVPGPTMVAVLGVP

>gi568815575f:136548249_136759412|GENSCAN_predicted_CDS_3|354_bp
atgaaaaatgaaagagaaccagagaaaaacagctgtgtatatatctgttttgatttacca
aaagcctaccgctatgttcaagaagcgaaggagcccctacaacttcacaaaaagctgtgg
aaagctataaagctgatgcccagacatggagctcggtcaaccgtgaggggccatgtatgg
acaaaagttctgaggagatcagtcagtagaaagaggagaatggagcaggtatactgtgag
gagcagagacaccaagagaaatatcatgggcctctggagagagaaccagaaattgtagct
gccttgctacctgttccaggtcccactatggtggctgtcttgggagtaccatga

>gi568815575f:136548249_136759412|GENSCAN_predicted_peptide_4|377_aa
MRFLRLTVCPLLMNIFLLRFPLRISKIEIEISLLLVDEFVTFLETGEPKKLDSDRKILPL
SVKKSMTFQGKNEYMEEETCFFFTYKKESLEMIGSALFAVYLHRRLDKIEDERNLHEDFV
FMKTIQRCNTGERSLSLLNCEEIKSQFEGFVKLPLGKMMKSTKLGFCIAVSPHPNLDALA
LGTQSLIPISQGSNSRQQLPWQQATSEGTPEDWVALSIKSANVAESDAVECCTTVSHAAK
ILPYIPQQVLKLVLQWAEKGYYTMSNNLVTLENGKQLTVKRQGLYYIYAQVTFCSNREAS
SQAPFIASLCLKSPGRFERILLRAANTHSSAKPCGQQSIHLGGVFELQPGASVFVNVTDP
SQVSHGTGFTSFGLLKL

>gi568815575f:136548249_136759412|GENSCAN_predicted_CDS_4|1134_bp
atgcggttcctccgcttgactgtgtgtcctctgctgatgaacatctttctgctcaggttc
ccgcttcgtattagtaagattgaaattgaaataagtctattgctggtggatgaatttgtc
actttccttgaaactggtgaacccaaaaagttagacagtgataggaaaatactgccattg
tctgttaagaagtctatgacatttcaaggcaagaatgaatatatggaagaagaaacttgt
ttcttctttacttacaaaaaggaaagcctggaaatgattgggtcagcactttttgctgtg
tatcttcatagaaggttggacaagatagaagatgaaaggaatcttcatgaagattttgta
ttcatgaaaacgatacagagatgcaacacaggagaaagatccttatccttactgaactgt
gaggagattaaaagccagtttgaaggctttgtgaagctaccactaggcaaaatgatgaag
tccaccaagcttggtttttgcattgctgtgtctccccatccaaaccttgatgctctcgca
ctggggacccagagtctgatccccatttcccagggaagcaatagccgtcaacagctgccg
tggcagcaggccacaagtgaagggacacctgaagactgggtggctttgagcatcaaatca
gctaatgtggccgaaagtgatgctgtcgagtgctgtacaaccgtaagccatgctgctaaa
atcttgccctacatcccacagcaagtactaaaattagtgttacagtgggctgaaaaagga
tactacaccatgagcaacaacttggtaaccctggaaaatgggaaacagctgaccgttaaa
agacaaggactctattatatctatgcccaagtcaccttctgttccaatcgggaagcttcg
agtcaagctccatttatagccagcctctgcctaaagtcccccggtagattcgagagaatc
ttactcagagctgcaaatacccacagttccgccaaaccttgcgggcaacaatccattcac
ttgggaggagtatttgaattgcaaccaggtgcttcggtgtttgtcaatgtgactgatcca
agccaagtgagccatggcactggcttcacgtcctttggcttactcaaactctga

>gi568815575f:136548249_136759412|GENSCAN_predicted_peptide_5|626_aa
MKIFDPDDLYSGVNFSKVLSTLLAVNKATEDQLSERPCGRSSSLSAANTSQTNPQGAVSS
TVSGLQRQSKTVEMTENGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGT
LNGRTGWFPSNYVREIKSSERPLSPKAVKGFETAPLTKNYYTVVLQNILDTEKEYAKELQ
SLLVTYLRPLQSNNNLSTVEVTSLLGNFEEVCTFQQTLCQALEECSKFPENQHKVGGCLL
SLMPHFKSMYLAYCANHPSAVNVLTQHSDELEQFMENQGASSPGILILTTNLSKPFMRLE
KYVTLLQELERHMEGQCQDLRKRKQLELQILSEPIQAWEGEDIKNLGNVIFMSQVMVQYG
ACEEKEERYLMLFSNVLIMLSASPRMSGFIYQGKIPIAGTVVTRLDEIEGNDCTFEITGN
TVERIVVHCNNNQDFQEWLEQLNRLIRGPASCSSLSKTSSSSCSAHSESSKSPKTMKKFL
HKRKTERKPSEEEYVIRKSTAALEEDAQILKVIEAYCTSANFQQGHGSSTRKDSIPQVLL
PEEEKLIIEETRSNGQTIMEEKSLVDTVYALKDEVRELKQENKRMKQCLEEELKSRRDLE
KLVRRLLKQTDECIRGESSSKTSILP

>gi568815575f:136548249_136759412|GENSCAN_predicted_CDS_5|1881_bp
atgaagatatttgatcctgatgacctttattcaggggtcaatttctccaaggtactgagt
actcttttagctgtcaacaaagcaacagaagatcagctatcagaaagaccatgtggacgt
tcctcttctcttagtgctgctaatacttctcagacaaacccacagggagcagtttctagc
acagtttcagggctgcaaaggcagtcaaagacagtggagatgacggaaaatggaagtcat
cagttgatagtaaaagcaagattcaactttaagcagactaatgaggatgaactgtcagtt
tgtaagggggacatcatttacgtcacacgagttgaagaaggaggctggtgggaaggcaca
ttaaatgggagaacaggctggttccccagtaattatgtccgtgaaattaaatccagtgag
agacctctctccccaaaagccgtcaaaggatttgaaactgctccacttaccaagaattat
tatactgtggtgttacagaacatcctggacactgaaaaagaatatgctaaagaacttcag
tctcttcttgttacttacttaagacccctgcagtccaataacaatctgagtactgtggag
gttacatctttactgggaaacttcgaggaagtatgcacatttcaacagacactctgccaa
gccttggaagaatgttcaaagtttccagaaaaccagcacaaagtaggaggttgtctactg
agtctcatgcctcattttaaatctatgtatctggcttactgtgcaaaccatccttcagct
gtaaatgtgctcactcagcacagtgatgagttggaacaattcatggaaaatcaaggtgca
tcgagcccaggtatcctcattttaacaacaaacctcagcaaaccattcatgcgactggag
aaatatgttactctcttgcaagagttagaacggcatatggaggggcaatgtcaagatctg
aggaagagaaaacagctggagttacagatactgtccgaacctattcaggcatgggaagga
gaagatattaaaaacttgggaaatgtgatttttatgtcacaagtaatggtgcagtatgga
gcatgtgaggaaaaagaggagcggtaccttatgttattttcaaatgtcctgataatgtta
tctgcaagtcctcggatgagtggctttatctatcagggaaaaataccaatagcaggaacg
gtggtgactagattagatgaaattgaagggaatgactgcacatttgaaatcactggtaac
acagtggagagaattgtggtccattgtaacaacaaccaggacttccaggaatggttggag
cagctgaacagactgatcagaggacctgcctcttgcagttcattatccaaaacctcatcg
tcatcatgtagtgctcattctgagtctagtaaaagccctaaaacgatgaagaaatttctt
cataaaaggaagactgagagaaaaccatcggaggaggaatatgtgattaggaaaagtaca
gctgctctggaagaggatgctcaaatccttaaagtgatcgaagcctactgcaccagcgca
aattttcaacaaggccatggctcaagtactcgaaaagattccattccacaagtcctactc
cctgaggaagagaaactcatcattgaagaaaccagaagcaacggccagaccatcatggaa
gaaaagagccttgttgatactgtttacgccttgaaggacgaggtcagagaactgaagcag
gaaaataaaagaatgaagcaatgcctggaagaagaactgaaatcaagaagggacctagaa
aagctggtgcggaggcttttgaagcaaacagatgagtgtattcgaggcgagtccagtagc
aagacctcaattcttccataa