GENSCAN 1.0	Date run: 16-Aug-121	Time: 14:33:24

Sequence gi568815575r:30459453_30660355 : 200903 bp : 39.73% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    998   1111  114  0  0  102   95    63 0.156   7.90
 1.02 Intr +  20590  20655   66  2  0   87   66    50 0.018   0.66
 1.03 Term +  39051  39328  278  1  2   28   40   271 0.551  10.94
 1.04 PlyA +  39649  39654    6                               1.05

 2.00 Prom +  46505  46544   40                              -4.35
 2.01 Init +  57094  57152   59  0  2   68   90    52 0.372   4.23
 2.02 Intr +  62564  62686  123  2  0   54  108   106 0.260   7.98
 2.03 Intr +  65424  65445   22  0  1   60  111     7 0.339  -3.17
 2.04 Term +  67669  67821  153  0  0    6   46   168 0.562   1.34
 2.05 PlyA +  68304  68309    6                               1.05

 3.00 Prom +  74226  74265   40                              -4.05
 3.01 Init +  74482  74598  117  0  0   88   42    98 0.137   5.45
 3.02 Term +  80450  80692  243  1  0    3   42   590 0.417  40.82
 3.03 PlyA +  81040  81045    6                               1.05

 4.00 Prom +  81049  81088   40                              -8.35
 4.01 Init +  81509  81563   55  1  1   50   49    36 0.303  -2.60
 4.02 Intr +  82646  82811  166  0  1  -16   45   261 0.199   9.50
 4.03 Intr +  96642  96669   28  0  1   82  115    34 0.154   2.70
 4.04 Term +  97989  98105  117  2  0   84   48    73 0.223   0.46
 4.05 PlyA +  98258  98263    6                               1.05

 5.06 PlyA -  98271  98266    6                               1.05
 5.05 Term - 100904  99998  907  1  1   95   44   605 0.023  47.58
 5.04 Intr - 110177 110096   82  0  1  119   57    73 0.033   5.08
 5.03 Intr - 137792 137683  110  1  2   52   89    74 0.458   2.91
 5.02 Intr - 138192 138054  139  1  1   98   49   110 0.824   6.70
 5.01 Init - 141267 141099  169  0  1   69   75    61 0.235   2.67
 5.00 Prom - 150383 150344   40                              -2.85

 6.00 Prom + 157167 157206   40                              -7.65
 6.01 Init + 158002 158196  195  0  0   74  -26   204 0.413   6.58
 6.02 Intr + 160637 160753  117  1  0   71  105    95 0.558   9.24
 6.03 Intr + 163455 163531   77  2  2   54   96    25 0.257  -2.71
 6.04 Intr + 170686 171255  570  1  0   81   80   674 0.065  56.85
 6.05 Intr + 182590 182750  161  1  2   66   78    95 0.331   5.01
 6.06 Intr + 193754 193883  130  0  1   56   59    60 0.367  -1.27
 6.07 Intr + 194046 194163  118  0  1   75   85    52 0.725   3.15
 6.08 Term + 194529 194687  159  2  0   83   42   101 0.855   1.96
 6.09 PlyA + 195290 195295    6                               1.05

 7.02 PlyA - 196295 196290    6                               1.05
 7.01 Term - 198345 198165  181  2  1   93   55    91 0.654   2.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  18220  18237   18  0  0  106   95    24 0.842   3.87
S.002 Term +  21180  21317  138  2  0  112   48    76 0.862   2.98
S.003 Sngl - 100903  99998  906  1  0   60   44   599 0.977  48.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_1|152_aa
XPSFSIELSSLASYVFMSYALLLYGIWLWSQSLYQNPSVPYQFPPEQILNKSLAHKSSSQ
AKRSSKEEEEKKRRRKRRRRRRRKRKRRRRRRRRGKGRRMRRGRRRRRRKKEEERGSSIP
AQSEEEEEEEEEEEEEERGSSITAQSLPGNIT

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_1|459_bp
nagccaagcttctcaatagagctgtcttcacttgcttcctacgttttcatgtcttacgct
ctcctcctctatggcatctggctgtggtcccaatctctctaccagaatccctctgtacct
tatcagtttcccccggaacagatccttaataaatcacttgcacataaatcctcatctcaa
gccaagcgcagtagcaaagaagaagaggaaaaaaaaaggaggaggaagagaagaagaagg
aggaggagaaagagaaagaggagaaggaggaggaggagaagaggaaaaggaagaaggatg
agaagaggaagaaggagaaggagaaggaagaaagaagaagaaagaggcagctcaatacct
gctcaatcagaagaagaagaagaagaagaagaggaggaggaggaggaggaaagaggcagc
tcaataactgctcaatcgttacctggcaacatcacttga

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_2|118_aa
MDIECGMINTGDVGEWEGESPSSFTSLTHIGPFELLLPTKPIDAFPASMVTNNEYHFSTS
NKTLGNNLFCNAETSSVGRGHPNPAALEELKTHTQKYRVWSGKSGDSQPSELRAPNRV

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_2|357_bp
atggacattgagtgtggaatgataaacactggagacgtgggagagtgggagggtgagagc
cccagctcctttacttctctgacccacattgggcctttcgagcttctgctaccaaccaag
ccaattgacgcatttcctgcatctatggttacaaacaatgagtatcactttagcacatcc
aacaaaacccttggcaacaatttgttctgcaatgccgagaccagctcggtcggtcgtgga
caccctaacccagcggcgctagaggaattaaagacacacacacagaaatatagagtgtgg
agtgggaaatcaggggactcacagccttcagagctgagagccccgaacagagtttga

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_3|119_aa
MEPGYQGSCCLLCDQEAPGSRTVLLLPSSGNHHDQETAAPGQQEQNSVSKNNNNNNNDEE
EEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKKKKKKRREEEGRRRRKKKKKKK

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_3|360_bp
atggaacctggctatcagggcagctgctgcctcttatgtgatcaagaggctcctggttcc
agaactgtgttgttattgccatcatcaggaaaccaccacgatcaagaaactgctgctcct
gggcaacaagagcaaaactctgtctcaaaaaataataataataataataatgatgaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagagaagagaagaagaaggaagaagaagaaggaagaagaagaagaagaaaaaataa

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_4|121_aa
MVDASERGSGEMESFWSKVSSSLILRNNNEPFLNRIVTCNEKGFYTTTGDAQLSGQTEKK
LQSTSQSQTCAKNSYLPGLHDNMTLFPRPLLKELTNLHLRVCLPSEPELSQVTTIWTTHY
C

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_4|366_bp
atggtggatgccagtgagagaggtagcggggaaatggagagcttttggtcaaaggtgtct
tcttctcttattctacgcaacaacaacgaaccatttctcaatcggattgtgacctgcaac
gaaaaaggattttatacgacaaccggtgatgcccagctcagtggccagaccgagaagaag
ctccaaagcacttcccaaagccaaacctgcgccaaaaacagttatcttccaggtctccat
gacaatatgacattgttcccaagaccactcctcaaggaacttaccaatctccatctcaga
gtctgccttcccagcgaacctgaattaagccaagtaaccactatatggacaacgcactac
tgttag

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_5|468_aa
MGWGLSSRKGLSPGGFCESSSHRSHRIRGVWLQNPGGRPFLRPLTPDLDEAGLPQGEPLR
LNFTWESQEGAIRTQEVRLRKDVDVAGKQSQSPQQGVQLGTGRKRKYTPRRLIIVMANEG
NGFIVRSMIFPVPWSSPGAGRLPIEEVTNLESSSSPQYKFLLPASGRMLSEGYLSGLEYW
NDIHWSCASYNEQVAGEKEEETNSVATLSYSSVDETQVRSLYVSCKSSGKFISSVHSRES
QHSRSQRVTVLQTNPNPVFESPNLAAVEICRDASRETYLVPSSCKSICKNYNDLQIAGGQ
VMAINSVTTDFPSESSFEYGPLLKSSEIPLPMEDSISTQPSDFPQKPIQRYSSYWRITSI
KEKSSLQMQNPISNAVLNEYLEQKVVELYKQYIMDTVFHDSSPTQILASELIMTSVDQIS
LQVSREKNLETSKARDIVFSRLLQLMSTEITEISTPSLHISQYSNVNP

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_5|1407_bp
atggggtggggcctgtcgtcaaggaagggactcagccctggaggtttctgtgagagctca
agccacaggagccacaggataagaggagtgtggctgcagaacccaggtggcaggcctttc
ctcaggccccttactcctgacctggacgaggccggtcttcctcaaggagagccccttcgc
cttaattttacctgggaaagccaagaaggagccatcaggactcaggaagtaagactgaga
aaagatgtagatgtggcagggaaacagagtcagagtccacagcagggtgtacagttaggg
acagggagaaaaaggaaatacaccccaagacgactaattattgtgatggcaaatgaagga
aatggttttattgtcagatccatgatttttccggtgccctggtcttctccaggagcaggt
aggctccccatagaagaagttacaaacctagaaagctcctcaagcccccaatataaattc
ctactgcctgcaagtggaagaatgctgtcagaagggtatctcagtggacttgagtactgg
aatgacatccactggagttgtgcctcttataatgagcaggtggctggggaaaaggaagag
gagacaaattctgttgctaccctttcctattcctctgtggatgaaacacaagtcagaagt
ctctacgtgagctgcaaatcatctggcaagtttatctcttcagtgcattcaagagagagc
caacatagcagaagtcagagagtcacagtgctgcagacaaaccccaatcctgtgtttgaa
agcccaaacttggctgcagttgaaatatgtagagatgccagcagagagacctacttggtt
ccatcttcttgcaaaagtatttgcaagaattataatgacttacagattgcagggggccag
gtgatggccattaattcagtgacaacagattttccctctgagagcagttttgaatatggc
cctttgctgaagtcatctgagattcctttacccatggaggattccatttctactcagccc
agtgactttccccaaaaacctatccagcggtactcatcctattggagaataacaagcatc
aaagagaaaagcagcttgcaaatgcagaatcctatttctaatgcagttctgaatgagtac
ctggagcagaaggttgtggagttatataaacagtacattatggacaccgtgtttcatgac
agttctcctacccagattctggcgtctgaactcatcatgacaagtgtagaccaaatcagt
cttcaagtgtctagagagaagaatctggagacctcaaaagccagagatatagtctttagc
cgcctattgcaattgatgtcaactgaaattactgaaattagcactcctagtctccatatt
tctcagtatagcaatgtaaatccatag

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_6|508_aa
MLHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPETHLMSESEWRNLGIQQSQGWVHYMIH
EPEPHTTRLCNCLPWRSGNWKEEKKTLKLGVLEAAKSPKLQKRLKTMVALAERSMPIPQG
LQLALAVFISVWTEQFRGLFLPASDRPPISSPLATSRTIFLAISCFWDLPAPFLWLAPSC
RPTMSSQIRQNYSTDVDAAVNSLVNLYLQASYTYLSLGFYFDGDHVALEGVSHFFRELAE
EKCKGYERLLKMQNQRGSRALFQDIKKPAEDEWGKTPDTMKAAMAPERKLNQALLDLHAL
GSARTDPHLCDFLESHFLDEDMDGAGGHYSHAGTNAGTENQTLHDLIYKWELNSENTWTQ
GGKQHTLGPFGQGGPAPVTSHRPLPVRAFGSFAFADWPAQVTAPTPTPPDTPLEPWGKPA
AIAGRPEAGFMAASKKAVLGPLVGAVDQGTSSTRFLEHLACETQDVLGWGESCVTAVVAN
TASFPAVERIKYWSDDALSSSPIKIAEG

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_6|1527_bp
atgttgcacaaacaaatttactattcggacaaatacgacgacgaggagtttgagtatcga
catgtcatgctgcccaaggacatagccaagctggtccctgaaacccatttgatgtctgaa
tctgaatggaggaatcttggcattcagcagagtcagggatgggtccattatatgatccat
gaaccagaaccgcacactacaaggctctgcaactgtctgccttggaggagcggtaactgg
aaggaggagaaaaagacattgaaattaggggtacttgaagctgcaaaatctccaaagctc
cagaaaagactgaaaactatggtggccctggcagagagaagtatgcccatcccccagggt
cttcaactagcattggctgtatttataagtgtttggacggaacagttccggggactcttt
cttccagcttccgaccgccctcctatttcctctccacttgcaacctccaggaccatcttc
ttggccatctcctgcttctgggacctgccagcaccgtttttgtggttagctccttcttgc
cgaccaaccatgagctcccagattcgtcagaattattccactgacgtggacgcagccgtc
aacagcctggtcaatttgtacctgcaggcctcctacacctacctctctctgggcttctat
ttcgacggcgatcatgtggctctggaaggcgtgagccacttcttccgcgaattggctgag
gaaaagtgcaagggctacgagcgtctcctgaagatgcaaaaccagcgtggcagccgtgct
ctcttccaggacatcaagaagccagctgaagatgagtggggtaagaccccggacaccatg
aaagccgccatggccccggagagaaaactgaatcaggctcttttggatcttcatgccctg
ggttctgctcgcacggacccccatctctgtgacttcctggagagtcacttcctagatgag
gacatggatggagctggaggtcattattctcatgcaggaactaatgcaggaacagaaaac
caaacactgcatgatctcatttataagtgggagctgaacagtgagaacacatggacacag
ggagggaaacaacacacgctggggccttttggtcagggaggccccgcccccgtgacgtct
catcgccctctgcctgtccgagcgttcggctcttttgcgtttgctgattggccagcccag
gtgacagcgcccacccccaccccccctgacacgcccctggagccttgggggaaaccggcc
gcaatcgccggccgacctgaagctggtttcatggcagcctcaaagaaggcagttttgggg
ccattggtgggggcggtggaccagggcaccagttcgacgcgctttttggaacatttggcc
tgcgagacacaggacgtccttggatggggggaaagctgtgtcacggctgtggtagctaac
acagcgtcctttccagcagtagaacgaataaagtattggagtgatgatgcgttgtcatcc
tctcccataaaaattgcagagggttga

>gi568815575r:30459453_30660355|GENSCAN_predicted_peptide_7|60_aa
XTLHSWGTQGSSQEDWFQSITDLDLNPSSTSYSVTLGTILSHSLITCVKKLTNTIYITEL

>gi568815575r:30459453_30660355|GENSCAN_predicted_CDS_7|183_bp
nntactctacacagctggggaacccaaggcagtagtcaggaggactggtttcagagtata
acagacctggacttgaatcctagctccaccagttactctgtgaccttgggcacaatcctc
agccacagtctaatcacctgtgtaaagaagcttactaatacgatctacatcacagagtta
tga