Result of FASTA (ccds) for pF1KE2370
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2370, 173 aa
  1>>>pF1KE2370 173 - 173 aa - 173 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5686+/-0.00069; mu= 10.7540+/- 0.041
 mean_var=56.5042+/-11.458, 0's: 0 Z-trim(108.8): 14  B-trim: 0 in 0/50
 Lambda= 0.170622
 statistics sampled from 10468 (10480) to 10468 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.322), width:  16
 Scan time:  1.900

The best scores are:                                      opt bits E(32554)
CCDS13695.1 CRYAA gene_id:1409|Hs108|chr21         ( 173) 1178 297.6 2.5e-81
CCDS82651.1 LOC102724652 gene_id:102724652|Hs108|c ( 173) 1178 297.6 2.5e-81
CCDS82652.1 LOC102724652 gene_id:102724652|Hs108|c ( 136)  745 191.0 2.4e-49
CCDS8351.1 CRYAB gene_id:1410|Hs108|chr11          ( 175)  657 169.4   1e-42
CCDS12475.1 HSPB6 gene_id:126393|Hs108|chr19       ( 160)  437 115.2 1.9e-26
CCDS81626.1 CRYAB gene_id:1410|Hs108|chr11         ( 108)  431 113.7 3.6e-26
CCDS5583.1 HSPB1 gene_id:3315|Hs108|chr7           ( 205)  360 96.3 1.2e-20
CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11          ( 182)  324 87.4 5.1e-18


>>CCDS13695.1 CRYAA gene_id:1409|Hs108|chr21              (173 aa)
 initn: 1178 init1: 1178 opt: 1178  Z-score: 1573.5  bits: 297.6 E(32554): 2.5e-81
Smith-Waterman score: 1178; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KE2 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRL
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KE2 PSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
              130       140       150       160       170   

>>CCDS82651.1 LOC102724652 gene_id:102724652|Hs108|chr21  (173 aa)
 initn: 1178 init1: 1178 opt: 1178  Z-score: 1573.5  bits: 297.6 E(32554): 2.5e-81
Smith-Waterman score: 1178; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)

               10        20        30        40        50        60
pF1KE2 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRL
               70        80        90       100       110       120

              130       140       150       160       170   
pF1KE2 PSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
              130       140       150       160       170   

>>CCDS82652.1 LOC102724652 gene_id:102724652|Hs108|chr21  (136 aa)
 initn: 745 init1: 745 opt: 745  Z-score: 999.2  bits: 191.0 E(32554): 2.4e-49
Smith-Waterman score: 745; 99.1% identity (100.0% similar) in 111 aa overlap (63-173:26-136)

             40        50        60        70        80        90  
pF1KE2 EYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDD
                                     .:::::::::::::::::::::::::::::
CCDS82      MPVCPGDSHRPPKALPHLVCGRRGRQVRSDRDKFVIFLDVKHFSPEDLTVKVQDD
                    10        20        30        40        50     

            100       110       120       130       140       150  
pF1KE2 FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDA
          60        70        80        90       100       110     

            160       170   
pF1KE2 THAERAIPVSREEKPTSAPSS
       :::::::::::::::::::::
CCDS82 THAERAIPVSREEKPTSAPSS
         120       130      

>>CCDS8351.1 CRYAB gene_id:1410|Hs108|chr11               (175 aa)
 initn: 504 init1: 406 opt: 657  Z-score: 880.3  bits: 169.4 E(32554): 1e-42
Smith-Waterman score: 657; 54.5% identity (80.9% similar) in 178 aa overlap (1-171:1-173)

               10         20        30        40        50         
pF1KE2 MDVTIQHPWFKRTLGPFY-PSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQ--SLFR--T
       ::..:.:::..: . ::. ::::::::::: :.: ::.:  :...::.: .  :..:  .
CCDS83 MDIAIHHPWIRRPFFPFHSPSRLFDQFFGEHLLESDLFP-TSTSLSPFYLRPPSFLRAPS
               10        20        30         40        50         

          60        70        80        90       100       110     
pF1KE2 VLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFH
        .:.:.::.: ..:.: . :::::::::.: :::  : .:.::::.::::.::.::::::
CCDS83 WFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFH
      60        70        80        90       100       110         

         120       130       140       150       160         170   
pF1KE2 RRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKP--TSAPSS
       :.::.:..::  ... :::.::.::  ::. :.    .  ::.::..:::::  :.::  
CCDS83 RKYRIPADVDPLTITSSLSSDGVLTVNGPRKQV----SGPERTIPITREEKPAVTAAPKK
     120       130       140       150           160       170     

>>CCDS12475.1 HSPB6 gene_id:126393|Hs108|chr19            (160 aa)
 initn: 395 init1: 289 opt: 437  Z-score: 588.3  bits: 115.2 E(32554): 1.9e-26
Smith-Waterman score: 437; 44.4% identity (73.6% similar) in 144 aa overlap (1-140:3-143)

                 10            20        30        40        50    
pF1KE2   MDVTIQHPWFKRTLGPF----YPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFR
         . : .:  :..:. .:.     :.::::: :::::.: .:  .  .:..:::   :  
CCDS12 MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYY---LRA
               10        20        30        40        50          

           60        70        80        90       100       110    
pF1KE2 TVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREF
         .   ...: .:  .: ..:::::::::...:::  . ::.:..:.:: :.::...:::
CCDS12 PSVALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREF
        60        70        80        90       100       110       

          120       130       140       150       160       170   
pF1KE2 HRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
       ::::::: .:: .:.. .:: .:.:.                                 
CCDS12 HRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAPPPAAAK                
       120       130       140       150       160                

>>CCDS81626.1 CRYAB gene_id:1410|Hs108|chr11              (108 aa)
 initn: 402 init1: 347 opt: 431  Z-score: 583.2  bits: 113.7 E(32554): 3.6e-26
Smith-Waterman score: 431; 56.4% identity (80.9% similar) in 110 aa overlap (64-171:1-106)

            40        50        60        70        80        90   
pF1KE2 YDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDF
                                     .: ..:.: . :::::::::.: :::  : 
CCDS81                               MRLEKDRFSVNLDVKHFSPEELKVKVLGDV
                                             10        20        30

           100       110       120       130       140       150   
pF1KE2 VEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDAT
       .:.::::.::::.::.:::::::.::.:..::  ... :::.::.::  ::. :.    .
CCDS81 IEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQV----S
               40        50        60        70        80          

           160         170   
pF1KE2 HAERAIPVSREEKP--TSAPSS
         ::.::..:::::  :.::  
CCDS81 GPERTIPITREEKPAVTAAPKK
         90       100        

>>CCDS5583.1 HSPB1 gene_id:3315|Hs108|chr7                (205 aa)
 initn: 382 init1: 327 opt: 360  Z-score: 484.0  bits: 96.3 E(32554): 1.2e-20
Smith-Waterman score: 364; 41.4% identity (60.9% similar) in 174 aa overlap (16-166:18-188)

                 10            20        30        40              
pF1KE2   MDVTIQHPWFKRTLGPF---YP-SRLFDQFFGEGLFEYDLLPFLSST-----------
                        ::   :: :::::: ::   .  .   .:...           
CCDS55 MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP
               10        20        30        40        50        60

                    50        60        70        80        90     
pF1KE2 --------ISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVE
                .: : ..: :  :.::.::.:   :.. . :::.::.:..::::..:  ::
CCDS55 AAIESPAVAAPAYSRALSRQ-LSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVE
               70        80         90       100       110         

         100       110       120       130       140       150     
pF1KE2 IHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHA
       : :::.::::.:::::: : :.: :: .:: . .: ::: .: ::  .:  .  : .   
CCDS55 ITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPK--LATQSN
     120       130       140       150       160       170         

         160       170             
pF1KE2 ERAIPVSREEKPTSAPSS          
       : .:::. : .                 
CCDS55 EITIPVTFESRAQLGGPEAAKSDETAAK
       180       190       200     

>>CCDS8352.1 HSPB2 gene_id:3316|Hs108|chr11               (182 aa)
 initn: 336 init1: 279 opt: 324  Z-score: 437.0  bits: 87.4 E(32554): 5.1e-18
Smith-Waterman score: 324; 38.0% identity (62.0% similar) in 158 aa overlap (19-170:21-178)

                 10        20        30         40        50       
pF1KE2   MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLL-PFLSSTISPYYRQSLFRTVL
                           :::: .: :::::.  ..: : :        : .      
CCDS83 MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGS
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE2 DSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRR
        .: ::.: .. ::  ::::.::.:...::.. :...:. ..: .: : ::..:::: : 
CCDS83 RAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRT
               70        80        90       100       110       120

       120       130       140       150            160       170  
pF1KE2 YRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAI-----PVSREEKPTSAPS
       : ::..::   .  .:: ::.:.. .:.    ::.   :  :     : . ::.  .:  
CCDS83 YVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIV
              130       140       150       160       170       180

         
pF1KE2 S 
         
CCDS83 EP
         




173 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 12:58:05 2016 done: Sun Nov  6 12:58:05 2016
 Total Scan time:  1.900 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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