GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:58:33

Sequence gi568815577f:6460783_6663961 : 203179 bp : 48.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5236   5626  391  1  1   67  116   186 0.255  14.03
 1.02 Intr +   7642   7714   73  0  1   57   71    81 0.648   2.28
 1.03 Intr +  10546  10774  229  2  1   59   64   202 0.804  11.83
 1.04 Intr +  12434  12522   89  2  2   77   72    70 0.656   3.91
 1.05 Intr +  14602  14651   50  2  2   75   80    24 0.235  -1.30
 1.06 Term +  18478  18612  135  0  0  117   44    69 0.394   3.42
 1.07 PlyA +  19307  19312    6                               1.05

 2.10 PlyA -  20716  20711    6                               1.05
 2.09 Term -  24134  23987  148  1  1   93   52   103 0.681   4.57
 2.08 Intr -  25448  25356   93  1  0   60   81   123 0.983   7.88
 2.07 Intr -  25673  25540  134  2  2   87   84   234 0.999  22.34
 2.06 Intr -  26423  26325   99  2  0   82   97   174 0.987  18.01
 2.05 Intr -  26630  26581   50  0  2  118   78    51 0.973   5.50
 2.04 Intr -  32328  32262   67  0  1  113   93    11 0.695   2.58
 2.03 Intr -  38041  37921  121  0  1  -23   41   144 0.405  -0.90
 2.02 Intr -  38442  38347   96  2  0   57   89   207 0.686  16.82
 2.01 Init -  51880  50754 1127  1  2   60   53   298 0.510  17.17
 2.00 Prom -  53138  53099   40                              -4.66

 3.00 Prom +  67928  67967   40                              -5.26
 3.01 Init +  71225  71361  137  1  2   69   84   113 0.925   8.61
 3.02 Intr +  73089  73218  130  0  1   67   41    75 0.835   1.40
 3.03 Term +  74736  74816   81  2  0   96   33    96 0.770   2.59
 3.04 PlyA +  76567  76572    6                               1.05

 4.00 Prom +  83544  83583   40                              -5.66
 4.01 Init +  88361  88428   68  1  2   69   86    68 0.409   5.25
 4.02 Intr +  91667  91872  206  2  2  109   75    67 0.698   6.34
 4.03 Intr +  96807  96913  107  1  2   90   65    53 0.359   3.13
 4.04 Intr +  99911 100189  279  1  0   52   94   464 0.603  41.07
 4.05 Intr + 101419 101541  123  0  0   61   99   333 0.764  32.48
 4.06 Term + 102973 103182  210  0  0  125   47   337 0.999  30.59
 4.07 PlyA + 103683 103688    6                               1.05

 5.03 PlyA - 105584 105579    6                              -3.74
 5.02 Term - 106555 106377  179  2  2   27   42   194 0.666   6.55
 5.01 Init - 112632 112536   97  0  1  104  106    29 0.243   6.87
 5.00 Prom - 115964 115925   40                              -5.46

 6.00 Prom + 117193 117232   40                              -6.76
 6.01 Init + 117517 117554   38  0  2   59   94    36 0.255   0.78
 6.02 Intr + 118414 118518  105  1  0  101   64    73 0.390   5.53
 6.03 Intr + 174805 174871   67  1  1   91   99    43 0.325   4.61
 6.04 Intr + 182856 182962  107  2  2   68   70    28 0.036  -1.99
 6.05 Intr + 185274 185424  151  0  1   45   -6   169 0.243   3.36
 6.06 Term + 201370 201567  198  0  0   36   37   150 0.114   2.10
 6.07 PlyA + 201585 201590    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  85131  84655  477  0  0   71   43   191 0.843   7.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_1|322_aa
XLGAKAASNDPGGWCFQGLGTTDLSENPKALDLLFPRKMHPLSEVRVPRFSFYPNLVRSR
RRERSSTFLRGSRESPTGRDSPSGTGPVWPGARMLRRRIFQKAVDPRPRQTQAAQRLAFG
PSPRPGALSRKRKTRTVPISSGQRNVLRLRSVPGSEYNTYAESAHVMSGQRINRYPTGGR
AEGRGLGLHHPLVAGRLGPQNWRRLEEEEEEEEGKEEEEEGKEEEEEGKEERIFLTLKEG
HDLTIPLQKRKTSVQEQGAELGTGPASLHAVWAQADPQEICPHCSTRQDVPSSSSFRTYL
LAAAAHLYLHHYLLLYSLLFPD

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_1|969_bp
nnactgggggccaaagcggcttcaaacgaccctggagggtggtgctttcaaggtcttggg
accacggacttgtctgaaaatccgaaggcgttggatcttctcttccccagaaaaatgcac
ccgctttcagaggttcgtgtcccacgcttttctttctatcccaaccttgtaagaagccgc
cgccgtgagcggagcagcaccttcctccgcgggtcgcgggagtcacctacgggaagggac
tctccgtctggcacaggccctgtctggcctggggcgcgcatgctccgccgccgaatcttc
cagaaagccgtggacccgaggccccggcagacgcaggcggcccagcgccttgcttttggc
ccctcgcctcgccctggagccctctctcgcaagcgaaagacacggacggtgcccatcagc
tctgggcagaggaacgtgctgcgcctccgcagcgtccccggctcagagtataacacgtat
gcagaaagtgcacatgtcatgagtggacagaggataaaccgctaccccactggggggcga
gcagaggggagaggcctgggcctgcaccatcccctggtggccggaaggctgggccctcag
aactggaggagattggaggaggaggaggaggaagaggaagggaaggaggaggaagaggaa
gggaaggaggaggaagaggaagggaaggaggagaggatcttcctaacactgaaggagggg
cacgacctgaccatccctttacagaagagaaagacgagtgtgcaggaacagggagcagag
ctgggcacagggccagcgtccctgcatgctgtgtgggcccaagctgacccgcaggaaatc
tgccctcactgctccacgcgccaggacgtgccctcctcctcctctttccgcacctatctc
ctggctgcggctgctcacttgtacctgcaccattacttactgctgtattctttgcttttt
ccagactga

>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_2|644_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSCIGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRTHIAKTILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDKWNRTEPSETIPHIYNHLIFDKPDKNKKWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLISRI
YKELKQTYKKKTNNPIKKWAKDMNRHFSKEDIYAANRHMKKCLSSLAIREMQIKTIMRYH
LTPVRMAIIKKSGNNRVGGVGSSVDGSGGGGWEMAEYLASIFGTEKDNRRLPEAASSRAE
SCLEHPGLLDVDTFVPTFGCECPVEQALTILIQNIYRNPQNSAQTADGSHCAVSDVEMQE
HYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFN
GQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKKHRSR
SRSRERRSRSRDRGRGGGGGGGGGGGGRERDRRRSRDRERSGRF

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_2|1935_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagagatgtgaaggacctcttcaaggagaactacaaaccactgctcaaagaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatgcataggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagtttatatggaaccaaaaaaga
acccacattgccaagacaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagacaaatggaatagaacagagccctcagaaacaataccacacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcgagatggattaaagacttaaatgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagagactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccagaatc
tacaaagaactcaaacaaacttacaagaaaaaaacaaacaaccccatcaaaaagtgggca
aaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaa
aaatgcttatcatcactggccatcagagaaatgcaaatcaaaaccataatgagataccat
ctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagggtcggcggcgtc
ggcagcagtgtcgacggcagcggcggcggcgggtgggaaatggcggagtatctggcctcc
atcttcggcaccgagaaagacaatcgccggctcccggaagccgcctcgagccgcgctgaa
agttgcctggagcatccgggccttttggacgtggacacgtttgttccaactttcggctgt
gaatgtcctgtcgagcaagctctgaccatcttgattcaaaacatctatcgtaatccccaa
aacagtgcacagacggctgacggctcacactgtgccgtgagcgatgtggagatgcaggaa
cactatgatgagttttttgaggaggtttttacagaaatggaggagaagtatggggaagta
gaggagatgaacgtctgtgacaacctgggagaccacctggtggggaacgtgtacgtcaag
tttcgccgtgaggaagatgcggaaaaggctgtgattgacttgaataaccgttggtttaat
ggacagccgatccacgccgagctgtcacccgtgacggacttcagagaagcctgctgccgt
cagtatgagatgggagaatgcacacgaggcggcttctgcaacttcatgcatttgaagccc
atttccagagagctgcggcgggagctgtatggccgccgtcgcaagaagcatagatcaaga
tcccgatcccgggagcgtcgttctcggtctagagaccgtggtcgtggcggtggcggtggc
ggtggtggaggtggcggcggacgggagcgtgacaggaggcggtcgagagatcgtgaaaga
tctgggcgattctga

>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_3|115_aa
MIYPIFGMSVSDGGGSGGGEITESMSAKHTLLGAPPPTAQLKDKRPQGDSRKGDGVTGQD
PSYEWELDQELSVLSHLLPVLGPLSETLQAMELTILPLAAVVLFRGTVIAFISIL

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_3|348_bp
atgatctacccaatatttgggatgtccgtgagtgatggcggtggtagtggtggtggtgaa
atcacggaatcaatgtctgcaaagcacacgctcttgggagcacctcctcccaccgcacag
ctgaaagacaagcgaccacagggagacagcagaaagggagatggagtcaccggccaggac
cccagctatgagtgggagctggaccaggagttgagtgtcctgagccacctcctccctgtg
ctgggtccactctcagaaacactccaggccatggagctgaccatcctgcctctggcagct
gtggtgctgtttaggggaacggtcattgccttcatctccattttatag

>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_4|330_aa
MPTTLVRPEITEESEHPGDAACPSPMQPTLGPAQPLGRRGWSPCAVPSAAHPAERPQAAG
LHTCDRPEAPAAGPTRLQFPSRQPMALRPLPDSGAGSLRSPLQARPILWQSLDVPRRPLS
RQALQRVGGLGLGSTLRCPEAPLTPASLQVPVVPKLNMDVTIQHPWFKRTLGPFYPSRLF
DQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPE
DLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCG
PKIQTGLDATHAERAIPVSREEKPTSAPSS

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_4|993_bp
atgcccaccacgctcgtgaggccggagatcaccgaggaatccgagcacccgggggacgct
gcatgcccgagccccatgcagcccacactgggtcctgcccagcccctgggccggagggga
tggtccccctgcgccgtccccagcgctgcccaccctgcagaacgtcctcaggcggccggg
ctccacacctgcgacaggcccgaggccccggctgcaggccccactcggctgcagttcccg
tcgaggcagccaatggccttgaggcctctcccagactcaggcgctggctcactcagaagc
cccctgcaggcccggccaatcctgtggcagagcctcgacgtcccacggcggcctctgagc
cgccaggccctacagcgtgtgggagggctcggccttggctccacactgcgctgcccagag
gccccgctgactcctgccagcctccaggtccccgtggtaccaaagctgaacatggatgtg
accatccagcacccctggttcaagcgcaccctggggcccttctaccccagccggctgttc
gaccagtttttcggcgagggcctttttgagtatgacctgctgcccttcctgtcgtccacc
atcagcccctactaccgccagtccctcttccgcaccgtgctggactccggcatctctgag
gttcgatccgaccgggacaagttcgtcatcttcctcgatgtgaagcacttctccccggag
gacctcaccgtgaaggtgcaggacgactttgtggagatccacggaaagcacaacgagcgc
caggacgaccacggctacatttcccgtgagttccaccgccgctaccgcctgccgtccaac
gtggaccagtcggccctctcttgctccctgtctgccgatggcatgctgaccttctgtggc
cccaagatccagactggcctggatgccacccacgccgagcgagccatccccgtgtcgcgg
gaggagaagcccacctcggctccctcgtcctaa

>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_5|91_aa
MGSPKIQSLLSSSNHGLPWLTLDICHQGPTNVVLAEPVLLEDPTGGAEEIRQPTSQGKFC
LGWPWCSVRLSKEPDRGSGEPPTGLADPAKA

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_5|276_bp
atgggcagccccaaaatacaaagtctcctatccagttccaaccacggcctgccctggctg
acactggacatttgccaccaggggcccacaaacgtggtccttgctgagcctgtgctgctg
gaagacccaactgggggagcagaggagatcagacagcccaccagccaggggaagttctgc
ctgggctggccctggtgctccgtgcgactctccaaggagcctgatcgaggatctggtgaa
ccacccacgggccttgcagaccctgccaaggcctag

>gi568815577f:6460783_6663961|GENSCAN_predicted_peptide_6|221_aa
MQPAKEDSSAQVRVLRPHSQVPCEEEVEREERGLGPTLTDLECGPWARHQSLLTPTIEGA
FVTVRRYRALLLQQSSVGTRNRAGCNHLQAITNSMAQCRSTMEQISIILKPKLGKDTPEK
ENFRPVSLMNIDAKILNKILANRIQQHIKKLIHHDLASIIQIPKPNIDTTTTTTTTTTHH
ANVFGKHCAKILNKILANQIQQHIKKFICNNGVGFVPRMQG

>gi568815577f:6460783_6663961|GENSCAN_predicted_CDS_6|666_bp
atgcaacctgcaaaagaggacagcagtgcccaagtcagggtcctgcggccccactcacag
gtgccctgtgaggaggaggtggagcgagaggagaggggactgggcccgacactcactgat
cttgaatgcggcccatgggccagacatcaaagtctgctcacaccaaccatagaaggagcc
tttgtcactgtcagaagatacagagctttgctgctccagcaaagctcagtgggcaccaga
aacagagctggctgtaaccacctccaggccatcactaactctatggcccaatgcaggagc
actatggaacaaatcagcatcatcctgaaaccaaaacttggcaaagacacaccagaaaaa
gaaaatttcaggcccgtatccctgatgaatatcgatgcgaaaatcctcaataaaatactg
gcaaaccgaatccagcagcacatcaaaaagcttatccaccacgatctagccagcatcatc
cagataccaaaacctaacatagatactacaacaacaacaacaacaacaacaacacatcat
gccaatgtctttggtaaacactgtgcaaaaatcctcaataaaatactggcaaaccaaatc
cagcagcatattaaaaagttcatctgcaacaatggagttggctttgtccccaggatgcaa
ggttga