GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:05:52

Sequence gi568815577f:36286137_36516363 : 230227 bp : 45.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2620   2675   56  0  2   74   99    51 0.794   2.58
 1.02 Intr +   5968   6097  130  1  1  114   98    23 0.797   6.60
 1.03 Term +   7184   7435  252  1  0   95   41   168 0.998   8.44
 1.04 PlyA +   7964   7969    6                               1.05

 2.02 PlyA -   8681   8676    6                              -0.45
 2.01 Sngl -   9605   9174  432  2  0   43   55   613 0.970  47.78
 2.00 Prom -  27674  27635   40                              -0.56

 3.02 PlyA -  28427  28422    6                               1.05
 3.01 Sngl -  34310  33939  372  2  0   92   42   243 0.525  14.23
 3.00 Prom -  42061  42022   40                              -8.56

 4.00 Prom +  44385  44424   40                              -3.06
 4.01 Init +  50295  50343   49  2  1   86   58     7 0.220  -3.38
 4.02 Intr +  50738  50870  133  0  1   53  100    72 0.763   4.60
 4.03 Intr +  51596  51728  133  2  1   69   -1   112 0.149   1.05
 4.04 Intr +  52643  52785  143  1  2   25   92    64 0.263  -0.35
 4.05 Intr +  55263  55410  148  0  1   49   75   157 0.690  10.74
 4.06 Intr +  58776  58895  120  2  0    9   98    65 0.340   0.29
 4.07 Intr +  63175  63272   98  0  2   99   91    27 0.903   2.91
 4.08 Intr +  70484  70588  105  2  0   30   98    77 0.767   2.23
 4.09 Intr +  73819  73941  123  1  0   81   81    42 0.833   2.50
 4.10 Intr +  74048  74122   75  2  0   49   86    89 0.864   3.43
 4.11 Intr +  82852  83740  889  1  1   42  105   541 0.971  42.52
 4.12 Intr +  86238  86395  158  2  2   44   85   125 0.964   6.61
 4.13 Term +  89007  89160  154  0  1   71   39   136 0.990   4.39
 4.14 PlyA +  89825  89830    6                              -0.45

 5.00 Prom +  90175  90214   40                              -4.26
 5.01 Init +  99216  99315  100  2  1   41   96   196 0.719  14.12
 5.02 Intr + 100026 100126  101  1  2    1   59   150 0.676   3.23
 5.03 Intr + 101462 101594  133  1  1   38  101    82 0.995   4.72
 5.04 Intr + 105415 105532  118  2  1   59   35   157 0.923   7.02
 5.05 Intr + 108411 108514  104  0  2   76   94    69 0.887   6.12
 5.06 Intr + 111279 111375   97  1  1   86   99    -7 0.492  -0.73
 5.07 Intr + 113385 113469   85  0  1   49   60    76 0.451   0.72
 5.08 Intr + 116622 116715   94  2  1   48   89    68 0.369   2.44
 5.09 Intr + 125327 125468  142  0  1   89  101   170 0.999  17.81
 5.10 Intr + 126694 127179  486  1  0   35  111   214 0.307  10.53
 5.11 Intr + 129159 129253   95  0  2   39  111    34 0.730   0.41
 5.12 Term + 130387 130517  131  2  2   68   47    83 0.489   0.54
 5.13 PlyA + 132858 132863    6                               1.05

 6.02 PlyA - 135084 135079    6                              -0.45
 6.01 Sngl - 136631 136254  378  2  0   46   49   268 0.822  14.88
 6.00 Prom - 140659 140620   40                              -4.26

 7.04 PlyA - 141925 141920    6                               1.05
 7.03 Term - 147084 146999   86  1  2   62   35    95 0.253  -0.58
 7.02 Intr - 158305 158147  159  2  0   70   72   115 0.407   8.06
 7.01 Init - 159907 159886   22  1  1   97   87    12 0.641   1.86
 7.00 Prom - 172376 172337   40                              -3.56

 8.02 PlyA - 172383 172378    6                               1.05
 8.01 Sngl - 175559 174840  720  2  0  110   47  1170 0.998 109.33
 8.00 Prom - 191590 191551   40                               1.14

 9.05 PlyA - 191971 191966    6                               1.05
 9.04 Term - 200762 200183  580  1  1   68   49   297 0.108  17.76
 9.03 Intr - 207461 207356  106  0  1  122   18    42 0.001  -0.13
 9.02 Intr - 219300 219240   61  0  1   83   35   103 0.214   2.81
 9.01 Intr - 224364 224227  138  0  0   69   90    43 0.160   3.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_1|145_aa
IQTFTQLEEDLKDEDESLSYRWAFIPEVDTEGPAFLSDVEENHQECKPHTVRILELLKLK
FGEISSSDEITMKSEFPLLRQHSVSSIRQLMPFFMTLNGAFKTQRQLPADSPGTPFLDFP
VTDSPRILKQLEECIEYDFLEHPEC

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_1|438_bp
attcagacattcacacagcttgaagaagatctaaaagatgaagatgagtcattgagttat
aggtgggcatttattccagaagtggacacagagggccctgccttcctgtcggatgtagag
gagaatcaccaagaatgcaaaccccacactgtcaggattctagaacttctaaaattaaag
tttggggaaatcagtagctctgatgagatcaccatgaagagtgaattcccgcttctgcgc
caacattctgtttccagcatcaggcagttgatgccattcttcatgactctaaatggtgca
tttaagacccagagacagctgcctgctgatagcccaggaactccattcttggactttcct
gtcacagatagcccaaggatcttaaaacaactggaagaatgcatcgaatatgattttctg
gaacatccagaatgttaa

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_2|143_aa
MRAAAGQQRRAVRLSGWADTSAAGRATGASTWGNLPTHVREKEPQDLFYKYSRIREIELK
SRYGLVPFASVRFEDPRDAEDAIYGRNGLLPSGSWQDLKDHTREAGDACYTDVQKDGVGM
VGCLRKEDMEYALRQLDDQIPLS

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_2|432_bp
atgcgggctgcggctggccagcagcgtcgggcggtgcggttgtccggctgggcggacacg
agcgcggctgggagggcgacgggtgcatctacgtggggaaaccttccgacccacgtgcgc
gagaaggagccgcaggacctgttctacaagtacagccgcatccgcgagatcgagctcaag
agccggtacggccttgtgcccttcgcctccgtgcgcttcgaggaccctcgagatgcagag
gatgctatttatggaagaaatggacttcttccatcaggcagctggcaggacctgaaggat
cacacgcgagaagctggggatgcctgttacacggatgtgcagaaggatggagtggggatg
gttgggtgtctcagaaaagaagacatggaatatgccctgcgtcaactggatgaccaaatt
ccactctcatga

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_3|123_aa
MAAPSPGPAAAPAAASAPQAATAHCRPPFACPPALLGHGPLHPSRLLTALRRIPRGGCAA
ILSELQSQERPPPQPDWEVAERLWSPMGTAHFRGGAHVWPLPPTSASRQCRIGSLGKMNC
LTG

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_3|372_bp
atggccgccccctccccgggccccgccgcagcccccgccgccgcgtcggccccacaagcc
gccaccgcccactgccggccccccttcgcttgcccgcccgccctcctgggacacggcccg
ctccacccctcgcggctgctcaccgcgctgaggcgtatcccgcggggtggctgcgccgcc
atcttgagcgagctacaaagccaggaacggcctccgccgcaacccgactgggaggtggcg
gaacgactgtggagccctatgggtaccgcccacttccggggaggggcgcacgtctggccc
ctcccacccacttccgcctccaggcaatgccgaattgggagcttggggaagatgaattgc
ctgactggttaa

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_4|775_aa
MGFHHVGQADLKLLTSDNAYDPDVNAKQIWIDKTVINDHICLTFTDNGNGMTSDKLHKML
SFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTKNGESMSMINLAESKASLAAIL
EHSLFSTEQKLLAELDAIIGKKGTRIIIWNLRSYKNATEFDFEKDKYDIRIPEDLDEITG
KKGYKKQERMDQIAPESDYSLRSKTVRITFGFNCRNKDHYGIMMYHRNRLIKAYEKVGCQ
LRANNMGVGVVGIIECNFLKPTHNKQDFDYTNEYRLTITALGEKLNDYWNEMKVKKNTEY
PLNLPVEDIQKRPDQTWVQCDACLKWRKLPDGMDQLPEKWYCSNNPDPQFRNCEVPEEPE
DEDLVHPTYEKTYKKTLKRRLSTRSSILNAKNRRLSSQFENSVYKGDDDDEDVIILEENS
TPKPAVDHDIDMKSEQSHVEQGGVQVEFVGDSEPCGQTGSTSTSSSRCDQGNTAATQTEV
PSLVVKKEETVEDEIDVRNDAVILPSCVEAEAKIHETQETTDKSADDAGCQLQELRNQLL
LVTEEKENYKRQCHMFTDQIKVLQQRILEMNDKYVKKETCHQSTETDAVFLLESINGKSE
SPDHMVSQYQQALEEIERLKKQCSALQHVKAECSQCSNNESKSEMDEMAVQLDDVFRQLD
KCSIERDQYKSEVELLEMEKSQIRSQCEELKTEVEQLKSTNQQTATDVSTSSNIEESVNH
MDGESLKLRSLRVNVGQLLAMIVPDLDLQQVNYDVDVVDEILGQVVEQMSEISST

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_4|2328_bp
atggggtttcaccatgttggccaggctgatctcaaactcctgacctcagataatgcttat
gatcctgatgtgaacgctaaacaaatatggattgacaaaacagtgataaatgaccatata
tgcttgacattcaccgacaatgggaatggtatgacttctgataaattacataaaatgcta
agctttggcttcagtgacaaagtcaccatgaatggtcatgtcccagttggattatatggg
aatggcttcaagtcgggttctatgcgtctgggtaaagacgcaatcgtttttaccaaaaat
ggagaaagcatgagcatgattaatttagcagaatcaaaagccagccttgctgcaattctg
gaacattctctgttttccacggaacagaagttactggcagaacttgatgctattataggc
aagaaggggacgaggatcatcatttggaatcttagaagctacaaaaatgcaacagagttc
gattttgaaaaggataaatatgatatcagaattcccgaggatttagatgagataacaggg
aagaaggggtacaagaagcaggaaaggatggaccagattgcccctgagagtgactattcc
ctgaggtctaaaacagtgagaattacctttggattcaactgcagaaataaagatcattat
gggataatgatgtatcacagaaatagactcatcaaagcttatgaaaaagttggatgtcag
ttaagggcaaacaacatgggtgttggagtggttggaattatagagtgtaatttccttaag
ccaactcataataaacaagatttcgactatactaatgagtacagacttacaataacagca
ctaggagaaaagctgaatgattactggaatgaaatgaaagtgaagaaaaatacagaatat
cctctaaatttgccagttgaagatatacagaagcgtcctgatcagacatgggttcagtgt
gatgcctgtctaaagtggcggaaattacctgatgggatggatcaacttcctgaaaaatgg
tattgctccaataaccctgacccacagttcagaaattgtgaggttccagaagaacctgaa
gatgaggatttggtacatcccacttatgaaaaaacctacaaaaagaccttgaaacggaga
ctttctactcgttcctcaattttgaatgcaaagaatcggagattgagtagtcagtttgaa
aattcagtttataaaggtgatgatgatgatgaagatgtcatcatcttagaagaaaacagt
acccccaaacctgcagtagatcatgatattgacatgaaatcagaacagagtcacgttgag
caaggtggtgttcaggttgagtttgtgggtgacagtgaaccttgtggccagactggttca
acaagcacctcatcatcccgatgcgaccagggaaatactgcagctacccagactgaagta
ccaagtttagttgttaaaaaagaagaaactgttgaagacgagatagacgtaagaaatgat
gcagtgattctgccctcctgtgtagaagctgaagcaaagatacatgaaacccaggaaacc
accgataaatctgcagatgatgcaggctgccaattacaagaactgagaaaccagctactc
cttgtcactgaggaaaaagagaattataaaagacagtgtcatatgtttactgatcaaatc
aaagtgttacaacagaggatactagaaatgaatgacaagtatgttaagaaagaaacttgc
catcagtccactgaaaccgatgctgtatttttacttgaaagtattaatggcaaatctgaa
agtccagaccatatggtatctcagtatcagcaagctttggaagaaatagaaaggctgaaa
aaacaatgtagtgctttgcaacatgtaaaggctgaatgcagccagtgttccaataatgag
agtaaaagtgaaatggatgagatggctgtgcagcttgacgatgtgtttagacaactggac
aaatgcagtattgagagggaccagtataaaagtgaggttgaattgctggaaatggaaaag
tcacaaatccgttcacagtgtgaagaactcaaaactgaagtagaacagttaaaatctaca
aatcaacagacggcaacagatgtttcaacatcaagtaacattgaggagtctgtaaatcat
atggatggagaaagcctcaaactccgatctcttcgagttaacgtaggacaactgctggct
atgattgtgcctgatcttgatcttcagcaagtgaattacgatgttgatgtagttgatgag
attttaggacaagttgttgaacaaatgagtgaaatcagtagtacttaa

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_5|561_aa
MRSRPCGGGACGAREAARAAREVTVPLTVRVPPAWHNKEPVYSLDFQHGTAGRIHRLASA
GVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKV
NDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMASASVDNTAII
WDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSG
IGAEGEARSYRMFHDDSMKSFFRRLSFTPDGSLLLTPGVELMSLPYRLVFAVASEDSVLL
YDTQQSFPFGYVSNIHYHTLSDISCRCESVGKVCNFSLFWGRRSSDGAFLAISSTDGYCS
FVTFEKDELGIPLKEKPVLNMRTPDTAKKTKSQTHRGSSPGPRPVEGTPASRTQDPSSPG
TTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEEKTLQPSSQNTKAHPSRRVTLNTLQA
WSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQSEIWMLLYSVSIFNLGHERFNVV
NPLFDEFLKLERFNVIQCENQ

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_5|1686_bp
atgaggtcccgcccatgcgggggcggggcctgcggcgcgcgggaagcggcgcgcgctgcg
cgggaggtgacggtgcctctgactgtccgggtccctccagcctggcacaacaaggagccc
gtgtacagcctggacttccagcatgggacggctgggaggatccacagactggcgtctgcc
ggcgtggacaccaatgtcaggatctggaaggtagaaaagggaccagatggaaaagccatc
gtggaatttttgtccaatcttgctcgtcataccaaagccgtcaatgttgtgcgtttttct
ccaactggggaaattttagcatcgggaggagatgatgctgtcatcctattgtggaaggtg
aatgataacaaggagccggagcagatcgcttttcaggatgaggacgaggcccagctgaac
aaggagaactggacggttgtgaagactctgcggggccacttagaagatgtgtatgatatt
tgctgggcaactgatgggaatttaatggcttctgcctctgtggataacacagccatcata
tgggatgtcagcaaaggacaaaagatatcaatttttaatgaacataaaagttatgtccaa
ggagtaacctgggaccctttgggtcaatatgttgctactctgagctgtgacagggtgctg
cgagtatacagtatacagaagaagcgtgtggctttcaatgtttcgaagatgctgtctgga
ataggggctgaaggagaggcaagaagctaccggatgtttcacgacgacagcatgaagtct
ttcttccgtagactgagtttcactcccgacggatctttgcttctcacgccaggtgtggag
ctgatgagtctgccctaccgcctggtgtttgctgtggcctcggaggattccgtgcttctg
tatgacacccagcagtccttcccttttggttacgtgtctaatatacattaccacaccctc
agtgacatttcatgtagatgtgagagtgttggtaaggtctgtaacttttccctgttttgg
ggacgaaggtccagcgatggtgccttcctggccatttcttccacggacggttactgctca
tttgtgacatttgagaaagatgaacttggaattcctttgaaagagaagccagttttgaac
atgagaactcctgatacagcaaagaaaaccaagagtcagacacatcgagggtcttcgcca
ggacccagaccggtagagggaacccctgccagcagaacccaagaccccagcagccccggc
acgactccccctcaggccagacaggccccagccccaacagtcatcagggaccctccctcc
atcactcctgctgtcaaaagccccttgccggggccttcggaggagaagaccctgcagccc
agtagtcaaaacacaaaagcccacccatcccggagggtcactctgaacacactgcaagcc
tggagcaagacaacaccccggagaataaacttaacacccttaaagacggacactccacca
agttctgtaccaaccagtgtgatttccaccccttctacagaagaaattcagtcagaaata
tggatgctgttgtattcagtatccatttttaacttgggacatgaacgttttaacgtagta
aatcctctttttgatgagtttctgaaactggagcggttcaacgttatccagtgtgaaaat
cagtga

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_6|125_aa
MWRGSGPVTSRIRRQATSKAALNIEDSVEIKRTNNSNASGVNDNQQTCQSWRHGRTLDGT
VTGTAAYLIRGRQGIHSSFQQQSPTESRDKRPGPGKETGTGLFGASRREGLAIPPPSGFR
KCPAC

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_6|378_bp
atgtggcggggcagtggcccagtgacatcaaggattaggagacaggccacgtctaaggcg
gccttgaatatcgaggattctgtggaaatcaaaaggacaaacaactcaaatgcctctggt
gtcaacgacaaccagcagacatgtcagtcctggaggcatggtcggactctggatgggaca
gtcacgggaacagctgcctatctgataaggggccgccagggaattcacagcagtttccaa
cagcagagccccacagagagcagggacaagagacctgggcccgggaaggagacagggaca
ggactctttggggcaagtaggagagaaggattagcaataccgccccctagtggcttccgc
aagtgcccggcctgttag

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_7|88_aa
MGNRSIERTWMKLEAIILSRQTQEQKTKRLMYSLISGSRTMRTRGHREGNITHRGLSGVE
ECGSSDKFDQFPAVICTATRQCLSYHYE

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_7|267_bp
atggggaacagaagtattgaaaggacatggatgaagctggaagccatcatcctcagcaga
caaacacaggaacagaaaaccaaacgcctcatgtactcactcataagtggaagtcgaaca
atgagaacacgtggacacagggaggggaacatcacacaccggggcctgtcgggggtggag
gaatgtggatcttcagacaagtttgatcagttcccagctgtcatctgtacagccacacga
cagtgcctttcttaccattatgagtaa

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_8|239_aa
MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
LCLSCQDEAPYRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLNDYV

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_8|720_bp
atggccagcacggccgtgcagcttctgggcttcctgctcagcttcctgggcatggtgggc
acgttgatcaccaccatcctgccgcactggcggaggacagcgcacgtgggcaccaacatc
ctcacggccgtgtcctacctgaaagggctctggatggagtgtgtgtggcacagcacaggc
atctaccagtgccagatctaccgatccctgctggcgctgccccaagacctccaggctgcc
cgcgccctcatggtcatctcctgcctgctctcgggcatagcctgcgcctgcgccgtcatc
gggatgaagtgcacgcgctgcgccaagggcacacccgccaagaccacctttgccatcctc
ggcggcaccctcttcatcctggccggcctcctgtgcatggtggccgtctcctggaccacc
aacgacgtggtgcagaacttctacaacccgctgctgcccagcggcatgaagtttgagatt
ggccaggccctgtacctgggcttcatctcctcgtccctctcgctcattggtggcaccctg
ctttgcctgtcctgccaggacgaggcaccctacaggccctaccaggccccgcccagggcc
accacgaccactgcaaacaccgcacctgcctaccagccaccagctgcctacaaagacaat
cgggccccctcagtgacctcggccacgcacagcgggtacaggctgaacgactacgtgtga

>gi568815577f:36286137_36516363|GENSCAN_predicted_peptide_9|294_aa
GLQGPEIWTQAKKSRTVEAAVSTLLLTPETTQPSQTIWPLVFLMYENIIQEYDGFIVLEL
PPPAAWGLEELSFPCSLKLTLACSVLSFLDYKNLKDQTCRPRHRPHPVQATHRPTQGQDH
LLHWHPHGPSGSEALTGQESQDAYHCLRGKPKGNEKDLVKLAKFLKKEKVNVDMINLGEE
EVNREKLTAFVNTLNGKDGSGSHLVAVPPGPSLADALISSPILAGEGGAMLGLGASDFEF
GVDPSADPQLALALGFLWRSSSSGRMRSPDEQLQPLLLRPGLLQLGLKAQTRSC

>gi568815577f:36286137_36516363|GENSCAN_predicted_CDS_9|885_bp
gggctgcaaggcccagagatctggacacaagccaagaagtcaagaactgttgaagccgca
gtctccactctcctactgacaccagagaccacccagcccagccaaaccatatggcctctt
gttttcctgatgtatgagaacattattcaggagtatgatggcttcatcgtcctggaattg
cctcctccagcagcttggggactggaagaactgagcttcccttgctccttgaagctgaca
ctggcatgcagtgtcctgagttttctggattataagaacctcaaagatcagacctgcagg
cccagacaccggccgcatcctgtccaagctacacaccgtccaacccaagggcaagatcac
cttctacactggcatccacatggcccatctggctctgaagcgctgacggggcaagaatca
caagacgcatatcattgccttcgtgggaagcccaaaggcaatgagaaggatctggtgaaa
ctggctaaattcctcaagaaggagaaagtaaatgttgacatgataaatttgggggaagag
gaggtgaacagagaaaagctgacagcctttgtaaacacgttgaatggcaaagatggaagc
ggttctcatctggtggcagtgcctcctgggcccagcttggctgatgctctcatcagttct
ccgattttggctggggaagggggtgccatgctgggtctcggtgccagtgactttgaattt
ggagtagatcccagtgctgatcctcagctggccttggccctcgggtttctatggaggagc
agcagcagcggcaggatgaggagcccagacgagcagctgcagcctctgctgctgaggcca
ggattgctacaactgggactgaaggctcagacgaggtcctgctga