GENSCAN 1.0	Date run:  7-Nov-116	Time: 20:18:41

Sequence gi568815577r:33803529_34014502 : 210974 bp : 45.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7447   7694  248  0  2   97   75   120 0.889   7.86
 1.02 Intr +  10385  10544  160  2  1  104  103    72 0.694  10.29
 1.03 Intr +  14739  14877  139  2  1    0   77    96 0.222  -0.26
 1.04 Intr +  19959  20125  167  1  2   66   82   132 0.893  10.08
 1.05 Intr +  23290  23335   46  0  1   76  119     3 0.629   0.18
 1.06 Intr +  26096  26191   96  0  0   86   45    97 0.362   5.18
 1.07 Intr +  32913  33104  192  1  0   96  101   405 0.997  42.06
 1.08 Intr +  38216  38325  110  0  2   76   62    81 0.045   4.30
 1.09 Intr +  40582  40777  196  0  1   19   52    73 0.013  -4.21
 1.10 Intr +  53208  53329  122  1  2   82   94   208 0.956  21.01
 1.11 Intr +  55158  55264  107  2  2   82   80    66 0.230   4.21
 1.12 Intr +  61623  61806  184  0  1   98   78   462 0.840  45.99
 1.13 Term +  63060  63167  108  2  0   57   42    98 0.751   0.61
 1.14 PlyA +  68540  68545    6                               1.05

 2.00 Prom +  70697  70736   40                              -6.46
 2.01 Init +  71597  71728  132  1  0   58    4   196 0.807   8.34
 2.02 Intr +  71826  71993  168  2  0   46   53   196 0.973  12.04
 2.03 Intr +  77402  77515  114  1  0  104  100    33 0.709   6.74
 2.04 Intr +  78715  78927  213  0  0   67   98   235 0.984  21.31
 2.05 Intr +  80022  80143  122  2  2   80  100   118 0.998  11.49
 2.06 Intr +  81513  81595   83  0  2   73   30   113 0.839   3.28
 2.07 Intr +  81911  81994   84  0  0   57   91    57 0.726   2.69
 2.08 Intr +  82759  82932  174  2  0   81  101   319 0.999  32.41
 2.09 Intr +  84624  84768  145  1  1   77   21   214 0.792  12.94
 2.10 Term +  87588  87699  112  0  1   74   43   114 0.734   3.53
 2.11 PlyA +  92783  92788    6                               1.05

 3.05 PlyA -  95427  95422    6                               1.05
 3.04 Term -  98406  98165  242  1  2  106   34   138 0.351   6.39
 3.03 Intr - 105683 105554  130  2  1   45   70    68 0.618   0.97
 3.02 Intr - 108871 108761  111  1  0   68   92    98 0.632   8.78
 3.01 Init - 112118 112014  105  2  0   59   16   144 0.428   4.62
 3.00 Prom - 115286 115247   40                              -3.86

 4.02 PlyA - 115293 115288    6                               1.05
 4.01 Sngl - 124517 122895 1623  2  0   37   47   522 0.973  38.33
 4.00 Prom - 125765 125726   40                              -4.96

 5.02 PlyA - 125934 125929    6                               1.05
 5.01 Sngl - 127178 126162 1017  2  0   88   43   554 0.976  47.94
 5.00 Prom - 136814 136775   40                              -3.86

 6.07 PlyA - 137442 137437    6                               1.05
 6.06 Term - 145385 145270  116  0  2   94   41    50 0.076  -0.37
 6.05 Intr - 158672 158591   82  2  1   64   80    42 0.059   0.21
 6.04 Intr - 166022 165874  149  0  2   83   41   125 0.472   7.25
 6.03 Intr - 177809 177721   89  1  2  101   73    36 0.198   3.01
 6.02 Intr - 206221 206104  118  2  1   47  109    25 0.060   0.02
 6.01 Init - 210285 210234   52  0  1   65   74    39 0.198   1.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_1|624_aa
VDESQTGEPGWLGGELKGKTGWFPANYAEKIPENEVPAPVKPVTDSTSAPAPKLALRETP
APLAVTSSEPSTTPNNWADFSSTWPTSTNEKPETDNWDAWAAQPSLTVPSAGQLRQRSAF
TPATATGSSPSPVLGQGEKVEGLQAQALYPWRAKKDNHLNFNKNDVITVLEQQDMWWFGE
VQEFIAMYTYESSEQGDLTFQQGDVILVTKKDGDWWTGTVGDKAGVFPSNYVRLKDSEGS
GTAGKTGSLGKKPEIAQVIASYTATGPEQLTLAPGQLILIRKKNPVCQVIGMYDYTAQND
DELAFNKGQIINVLNKEDPDWWKGEVNGQVGLFPSNYVKLTTDMDPSQQFPKIPKRIFME
MTLDANGPKNARKNSSFFEMSGIRGLICPTNPCTNPGPLPDSRRPTGGSKQLFKRLRCTP
AMCRDLWTKDQSLLSRLLVDVDKLPVFHTVDGCSDLHLLDMLTPTERKRQGYIHELIVTE
ENYVNDLQLVTEIFQKPLMESELLTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEK
MPVKMIGDILSAQLPHMQPYIRFCSRQLNGAALIQQKTDEAPDFKEFVKLEQVPVPGDSY
QVSGLQSMQLPVSKALNQTTAFDS

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_1|1875_bp
gtggatgaaagccaaactggagaacccggctggcttggaggagaattaaaaggaaagaca
gggtggttccctgcaaactatgcagagaaaatcccagaaaatgaggttcccgctccagtg
aaaccagtgactgattcaacatctgcccctgcccccaaactggccttgcgtgagaccccc
gcccctttggcagtaacctcttcagagccctccacgacccctaataactgggccgacttc
agctccacgtggcccaccagcacgaatgagaaaccagaaacggataactgggatgcatgg
gcagcccagccctctctcaccgttccaagtgccggccagttaaggcagaggtccgccttt
actccagccacggccactggctcctccccgtctcctgtgctaggccagggtgaaaaggtg
gaggggctacaagctcaagccctatatccttggagagccaaaaaagacaaccacttaaat
tttaacaaaaatgatgtcatcaccgtcctggaacagcaagacatgtggtggtttggagaa
gttcaagaatttattgccatgtacacttacgagagttctgagcaaggagatttaaccttt
cagcaaggggatgtgattttggttaccaagaaagatggtgactggtggacaggaacagtg
ggcgacaaggccggagtcttcccttctaactatgtgaggcttaaagattcagagggctct
ggaactgctgggaaaacagggagtttaggaaaaaaacctgaaattgcccaggttattgcc
tcatacaccgccaccggccccgagcagctcactctcgcccctggtcagctgattttgatc
cgaaaaaagaacccagtgtgccaggtgattgggatgtacgactacaccgcgcagaatgac
gatgagctggccttcaacaagggccagatcatcaacgtcctcaacaaggaggaccctgac
tggtggaaaggagaagtcaatggacaagtggggctcttcccatccaattatgtgaagctg
accacagacatggacccaagccagcaatttccaaaaatacccaagagaatttttatggaa
atgacattggatgccaatggtcccaaaaatgcaaggaaaaatagctccttctttgaaatg
tctggtattcggggtctgatttgccctaccaatccgtgcacgaaccctggcccccttcct
gatagcaggaggcccaccggtggaagcaagcagctttttaaacgccttcgctgcactcct
gcaatgtgcagagacctctggaccaaagaccagagcctactcagcagactcttggttgat
gtggacaagctgcctgtgtttcacacggtcgacgggtgttcagacttacatctcttggat
atgttgaccccaactgaaagaaagcgacaaggatacatccacgagctcattgtcaccgag
gagaactatgtgaatgacctgcagctggtcacagagatttttcaaaaacccctgatggag
tctgagctgctgacagaaaaagaggttgctatgatttttgtgaactggaaggagctgatt
atgtgtaatatcaaactactaaaagcgctgagagtccgcaagaagatgtccggggagaag
atgcctgtgaagatgattggagacatcctgagcgcacagctgccgcacatgcagccctac
atccgcttctgcagccgccagctcaacggggctgccctgatccagcagaagacggatgag
gccccagacttcaaggagttcgtcaaactggagcaggtcccggtccctggagacagttat
caggtctcagggctccagtcaatgcagctgcccgtttctaaggcattaaaccagaccaca
gcctttgacagctaa

>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_2|448_aa
MGPFTASRNATHWSHQGVAVICYVIAMWVLRAAIAQVGAVHERMILENTPENHPDHSHLK
HALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSENLVEVMDPREVLEPRFSAHR
VSKGQWREGAVPFLFAERQLVFNSVTNCLGPRKFLHSGKLYKAKSNKELYGFLFNDFLLL
TQITKPLGSSGTDKVFSPKSNLQYKMYKTPIFLNEVLVKLPTDPSGDEPIFHISHIDRVY
TLRAESINERTAWVQKIKAASELYIETEKKKREKAYLVRSQRATGIGRLMVNVVEGIELK
PCRSHGKSNPYCEVTMGSQCHITKTIQDTLNPKWNSNCQFFIRDLEQEVLCITVFERDQF
SPDDFLGRTEIRVADIKKDQGSKGPVTKCLLLHEVPTGEIVVRLDLQLFDEPWMDSIISW
NQVCCDHESLKMWLIRIQAWTNLERGTF

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_2|1347_bp
atgggaccattcactgcttcccgcaatgccacccactggagccatcaaggagtggccgtc
atctgctacgtgattgccatgtgggtgctcagagctgcgattgctcaagtgggcgccgtc
catgaaaggatgatcctggaaaacacccctgaaaaccacccggaccacagccacttgaag
cacgccctggagaaggcggaagagctctgttcccaggtgaacgaaggggtgcgggagaag
gagaactctgaccggctggagtggatccaggcccacgtgcagtgtgaaggcctgtctgag
aacctagtggaggtgatggacccccgagaggtgttagagccgcgtttcagcgcccaccgt
gtctctaagggtcagtggagggagggagctgttcccttcctgtttgctgagcggcaactt
gtgttcaattcagtgaccaattgcttggggccgcgcaaatttctgcacagtgggaagctc
tacaaggccaagagcaacaaggagctgtatggcttccttttcaacgacttcctcctgctg
actcagatcacgaagcctttggggtcttctggcaccgacaaagtcttcagccccaaatca
aacctgcagtataaaatgtataaaacacctattttcctaaatgaggttctagtaaaatta
cccaccgacccttctggagacgagcccatcttccacatctcccacattgaccgcgtctat
actctccgagcagaaagcataaatgaaaggactgcctgggtgcagaaaatcaaagctgct
tctgaactctacatagagactgagaaaaagaagcgcgagaaagcgtacctggtccgttcc
caaagggcaacaggcattggaaggttgatggtgaacgtggttgaaggcatcgagttgaaa
ccctgtcggtcacatggaaagagcaacccgtactgtgaggtgaccatgggttcccagtgc
cacatcaccaagacgatccaggacactctgaaccccaagtggaattccaactgccagttc
ttcatccgagacctggagcaggaagtcctctgcatcactgtgttcgagagggaccagttc
tcaccagatgattttttgggtcggacggagatccgtgtggcggacatcaagaaagaccag
ggctccaaaggtccagttacgaagtgtcttctgctgcacgaagtccccacgggagagatt
gtggtccgcttggacctgcagttgtttgatgagccgtggatggacagcatcatctcctgg
aaccaggtttgctgtgaccatgagagcctgaagatgtggctcattcggatccaggcctgg
actaatctggaaagagggactttctag

>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_3|195_aa
MLRLGKSGSLQGYGTWRVGATQDDPAFVPRDAYGAPPVQVYGIEGRYATALYSAASKQNK
LEQVEKELLRVAQILKEPKVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLIMRPAL
QKVASYTQSQLLQTCDCQWTNRLCGSLMLLMLPRSFRVKLSKLPVDQAHTILGNDEALHM
SPYEVTRENLEIYVQ

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_3|588_bp
atgcttcggctggggaagtctggcagtcttcaaggttatgggacctggcgagtgggagcg
actcaggacgacccagcgtttgtcccccgggatgcctacggggcacctcctgttcaggta
tacggtattgaaggtcgctatgccacagctctttattctgctgcatcaaaacagaataag
ctggagcaagtagaaaaggagttgttgagagtagcacaaatcctgaaggaacccaaagtg
gctgcttctgttttgaatccctatgtgaagcgttccattaaagtgaaaagcctaaatgac
atcacagcaaaagagaggttctctcccctcactaccaatctgatcatgaggcctgctctg
cagaaggtggcgtcatacacacaatcacagctcctacagacatgtgactgccaatggaca
aaccgtctttgcgggagcctcatgctgctgatgctgcccagatccttcagagtcaaactc
agcaagcttcctgttgatcaagcacatacaatcttggggaatgatgaggcccttcatatg
tcgccttacgaggtcaccagagagaacctagagatctatgtacaatga

>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_4|540_aa
MNIDAKILNKILANGIQQHIKKLIHHDQVGFIPGMQGCFNIRKSINLIQHINRAKDKNHM
IISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGWPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDIIVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIVSELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMP
FFTELEKTTLKFIWNQKRARIAKSILSQKDKAGGITLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEITPHIYNYLIFDQPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTP
YTKLNSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMCKTPKAMATKAKIDKWDLIK
LKSFCTAKETTIRVNRQPAKLEKIFATYSSDKGLISRIYNELKQMYKKKQTTPSKSGRRT

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_4|1623_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaacggaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctgcttcaat
atacgcaaatcaataaatctaatccagcatataaacagagccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaa
actctcaataaattaggtattgatgggatgtatttcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatggcctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagacgacataattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcgtgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgcct
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgc
atcgccaagtcaatcctaagccaaaaggacaaagctggaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagatcaatggaacagaacagagccctcagaaataacgccgcatatctacaactatctg
atctttgaccaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaactcaattcaagatggattaaagacttaaacgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tgtaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctgcaaaa
ttggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaat
gaactcaaacaaatgtacaagaaaaaacaaacaaccccatcaaaaagtgggcgaaggaca
tga

>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_5|338_aa
MGKKQNRKTGSSKMQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEEYITRITNAEKCLKELMELKTKARELREECRSLRSRWDQLEERVSV
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTADLLAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLSDFVTTRPALKELLKEALNMERNNRYQPLQNHAKM

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_5|1017_bp
atggggaaaaaacagaacagaaaaactggaagctctaaaatgcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggtaaagaagttgaaaactttgaaaaaaatttagaagaatatataactagaata
accaatgcagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgggatcaactggaagaaagggtatcagtg
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatttgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaatactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacagcggatctcttggcagaaaccctacaagcc
agaagagagtgggggccgatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagcgaaggagaaataaaatactttacagacaag
caaatgctgagcgattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815577r:33803529_34014502|GENSCAN_predicted_peptide_6|201_aa
MPFAFHHDYEASPAKWNSRSRSCRIPYGPLSQSDPVLLPLCWSVGLTHADGVFLASRISH
RAISFYRKNPNTLRFNHVKSACVWKYMDSLVAADIIFYNHIYILAFLFQVVLLRNCSNFQ
ELKMYCLKSNSCRDFQKNFQINLFLSNSTPSGPGSSAVAETTTGSKRHRQMVLWWSPAQK
MATSGAKLPQQQALSTAASNR

>gi568815577r:33803529_34014502|GENSCAN_predicted_CDS_6|606_bp
atgccttttgccttccaccatgattatgaggcctccccagccaagtggaactccaggagt
cggtcctgccgtattccttacggaccactgagccagtcagatccagtgcttcttcccctg
tgctggtcagtggggctgacccatgcagatggtgttttcctggcttccaggattagtcac
cgggccatatccttttatcgcaagaacccaaatactcttagattcaaccacgtgaaatct
gcatgtgtgtggaagtatatggacagtttggtggccgcagacatcatcttctacaaccac
atctacatccttgcctttctgtttcaagttgttctcttgagaaactgttcaaattttcag
gagctgaaaatgtactgccttaaatccaactcatgccgagatttccagaagaacttccaa
atcaacctgtttctctccaactccactcccagcggcccaggttcttctgctgttgctgag
acaaccacaggaagtaaaaggcacagacagatggtgctctggtggagccctgcccagaaa
atggccacttccggagcaaaactgccacagcaacaggccttgtcaacagcagcctccaac
cgttaa