GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:10:34

Sequence gi568815578f:1018774_1265077 : 246304 bp : 43.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 PlyA -    103     98    6                               1.05
 1.09 Term -   1351   1340   12  1  0  120   37     8 0.093  -2.90
 1.08 Intr -   1989   1935   55  2  1   86   95    49 0.064   4.38
 1.07 Intr -   7610   7520   91  0  1   72   84    46 0.033   1.65
 1.06 Intr -  23247  23140  108  1  0   58  101    27 0.063   1.26
 1.05 Intr -  34173  33980  194  2  2   82   72   123 0.295   9.24
 1.04 Intr -  37691  37631   61  0  1   64  116    38 0.628   1.99
 1.03 Intr -  39694  39589  106  1  1   81   98     5 0.446   0.59
 1.02 Intr -  40555  40457   99  1  0  156   72    11 0.765   6.61
 1.01 Init -  49240  49190   51  1  0   85  110    15 0.248   4.56
 1.00 Prom -  54148  54109   40                              -2.26

 2.00 Prom +  58264  58303   40                              -1.86
 2.01 Init +  73749  73787   39  2  0  111   97    20 0.410   5.39
 2.02 Intr +  76392  76517  126  2  0  112  121   -55 0.132   1.08
 2.03 Intr +  94591  94636   46  0  1   91   97    47 0.464   3.88
 2.04 Intr +  97648  97772  125  2  2   53   94    -5 0.323  -3.10
 2.05 Intr +  99980 100129  150  1  0  114  101   134 0.952  17.66
 2.06 Intr + 106725 106877  153  2  0   73  105   232 0.998  23.67
 2.07 Intr + 108653 108735   83  1  2   85   80    99 0.453   7.24
 2.08 Intr + 116348 116533  186  2  0  101  105   153 0.490  17.10
 2.09 Term + 128332 128419   88  1  1  -49   55   211 0.011   1.23
 2.10 PlyA + 129704 129709    6                               1.05

 3.00 Prom + 141328 141367   40                              -2.86
 3.01 Init + 141811 142114  304  0  1   71   13   320 0.829  20.24
 3.02 Intr + 142352 142811  460  0  1   17   -6   547 0.431  30.44
 3.03 Intr + 144357 144410   54  0  0  110   92     7 0.577   1.39
 3.04 Intr + 145545 145703  159  0  0  110   87    67 0.750   7.90
 3.05 Term + 146256 146307   52  0  1  108   49    70 0.825   2.00
 3.06 PlyA + 148192 148197    6                               1.05

 4.03 PlyA - 148581 148576    6                               1.05
 4.02 Term - 162814 162075  740  2  2  125   48   695 0.851  62.83
 4.01 Init - 166257 165948  310  0  1   54   39   218 0.901   8.99
 4.00 Prom - 169382 169343   40                              -7.06

 5.06 PlyA - 169433 169428    6                               1.05
 5.05 Term - 171476 171095  382  1  1   29   49   744 0.102  58.91
 5.04 Intr - 172152 172037  116  0  2   18   94    69 0.056  -0.25
 5.03 Intr - 175449 175336  114  0  0   95   84    26 0.089   3.54
 5.02 Intr - 177181 177112   70  0  1   99   67     0 0.255  -1.82
 5.01 Init - 179003 178867  137  2  2   95   71    96 0.569   8.21
 5.00 Prom - 190234 190195   40                              -3.96

 6.00 Prom + 191881 191920   40                              -6.16
 6.01 Init + 199335 199707  373  2  1   24   58   220 0.249   9.73
 6.02 Intr + 202082 202333  252  0  0   67   35   132 0.300   3.21
 6.03 Term + 203018 203280  263  0  2   70   55   152 0.539   5.79
 6.04 PlyA + 203299 203304    6                               1.05

 7.00 Prom + 204061 204100   40                              -2.46
 7.01 Init + 206643 206733   91  2  1   69   78    32 0.063  -0.99
 7.02 Intr + 212753 212846   94  0  1   96   22    65 0.053  -0.28
 7.03 Intr + 215312 215418  107  2  2  111   77    27 0.298   3.76
 7.04 Intr + 226918 226986   69  2  0   85   62    54 0.245   1.65
 7.05 Intr + 227045 227085   41  0  2  121   75     8 0.321   0.74
 7.06 Term + 235496 235684  189  1  0   86   49   116 0.531   4.95
 7.07 PlyA + 236540 236545    6                               1.05

 8.02 PlyA - 236808 236803    6                               1.05
 8.01 Term - 242207 242142   66  2  0  130   43    79 0.872   5.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 128410 128246  165  1  0   37   78   179 0.870  11.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_1|258_aa
MRKNQQREQCQMLLSNQILIPNKHLAPKLCLRVCLHRTQPATQILIPGGQHSQSLWEVSP
SSPSEEQPPVLSPGGVDPFPSLSYKVGSDDSTHMQARSQDSVKEKRSSRKVLGHLSLPCM
GHGLLPTLLMLTALALGLGSGDRTQQCCQSLMPMLKTMRGGKTKVKLGEKERSPHSSSAA
TFFTLTLITHNTWVWFFARDESPPLEWTWMELEAVILSKLMQEQKTKYHKFSLISGSKRE
LLMAPSEGGEAEPAKYLT

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_1|777_bp
atgaggaagaaccagcaaagagaacagtgtcaaatgcttctgagcaatcagatattgatt
cctaataaacaccttgcacctaaactctgtcttcgtgtctgcctgcatagaacccaacct
gcaacacaaattctgattcctggaggtcagcattcacaatccctttgggaagtatctccc
tcatctccctcggaggaacagcccccagttctcagtccaggtggggttgaccccttccca
tccctgagctacaaagttggaagtgatgattccacacatatgcaggctagatctcaagac
agtgtcaaggaaaaaaggagcagccgcaaggtgctgggccacctgagtctgccatgcatg
ggccacgggctcctaccgaccctcctgatgctcacagccctggcactggggttgggcagt
ggggacaggacacaacagtgctgccaatccctgatgcccatgctcaagaccatgagagga
ggaaagaccaaggtgaaactgggggaaaaggagaggtctccccactcctcttccgcggca
acattcttcaccttaactcttatcactcacaacacgtgggtttggttttttgcccgtgat
gagtctcctccactggaatggacatggatggagctggaggccgttatccttagcaaacta
atgcaggaacagaaaaccaaataccacaagttctcactcataagtgggagcaaaagggag
ctgctgatggcaccttcagagggtggtgaagctgaaccggctaagtacctcacgtaa

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_2|331_aa
MAVTVLGIVFMFKKLQMRGRSLEIVHLMCPSPHFTDGDAEAQGGAVTCYITNLVKPPTAL
IGQNGTLADVDLLIQNLCRRGSRIWLSQGNFRNTKFGEAQGQLTKGVMDYKETPKSRALM
AGLEVLFASAAPAITCRQDALVCFLHWEVVTHGYFGLGVGDQPGPNDKKSELLPAGWNNN
KDLYVLRYEYKDGSRKLLVKAITVESSMILNVLEYGSQQVADLTLNLDDYIDAEHLGDFH
RTYKNSEELRSRIVSGIITPIHEQWEKANVSSPHREFPPATAREVDPLRIPPHHPHTSRQ
PPWPRSIMDIVSVIIIIIIIIIIIIIITTLC

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_2|996_bp
atggctgtcactgttcttggcatagtgttcatgttcaagaaacttcaaatgagggggagg
agtttagaaattgtccatcttatgtgcccttctccccattttacagatggggacgctgag
gcccagggaggagcagtgacctgctatatcacaaaccttgttaagccacccacagccctc
atagggcagaatgggactcttgctgatgtagaccttctcatccagaatctctgcagaagg
ggttcaagaatctggttgtctcaaggaaactttaggaacacaaaatttggagaggcacag
ggccagctgacaaagggagtgatggactataaagagacgccgaagtcgcgggcgctcatg
gcgggcctggaggtactgttcgcatcggcagcgccggccatcacctgcaggcaggacgcg
ctcgtctgcttcttgcattgggaagtggtgacacacggttacttcggcttgggtgtcggt
gaccagccgggtcccaatgataagaagtcagaactgctgccagctgggtggaacaacaat
aaagacctgtatgtcctccggtatgagtataaggatgggtccagaaagctccttgtgaaa
gccatcaccgtggagagcagcatgatcctcaatgtgctggaatatggctcacagcaagtg
gcagacttgaccctgaacttggatgattatatcgatgcagaacacctgggtgacttccac
aggacctacaagaacagtgaggagcttcggtctcgtattgtgtctggaatcatcacacct
atccatgagcagtgggaaaaggctaatgtaagcagtccccaccgggagttcccccctgct
accgccagagaggtggacccactccggattcctccacaccacccacacaccagtcggcag
cctccctggcccaggtccattatggacattgtttccgttatcatcatcatcatcatcatc
atcatcatcatcatcatcatcaccaccctgtgttga

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_3|342_aa
MEEEITILVIDNGSSMCKAGFAGDDAPGTMFPSTVRCPQHQGMMVGMGQKVFYLGDKAQS
KHGILTMKYPIEHRIFTSWEGMEKIWHHTLQQAACVPGGAPGPDHLMKILTEYDYSFPTT
AKREIMRDIKEKQCCVAPDFEQEMATAMSSFSLEKSYKLPDSQVITIGNMQFQCLEVLFQ
PFFLGVEFCSIHETTFSSIIRCDVGIHKDLYANTVLASGTTMYPSISNRMQKEITALVPA
QGRSRSSCSQSASTPCDPLGPFVVGGEDLDPFGPRRGGMIVDPLRSGFPRALIDPSSGLP
NRLPPGAVPPGARFDPFGPIGTSPPGPNPDHLPPPGYDDMYL

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_3|1029_bp
atggaagaagagatcaccatactcgtcattgacaatggctccagcatgtgcaaagctggt
tttgctggggacgacgcccctggaaccatgtttccctccactgtcaggtgcccccaacac
cagggcatgatggtggggatgggccagaaggtcttctacctgggcgacaaggcccagagc
aagcacggcatcctgacgatgaagtaccccatcgagcacaggattttcaccagctgggaa
ggcatggagaagatctggcaccacaccctacaacaagctgcatgtgttcctggaggagca
cctggacctgaccacctcatgaagattctcacagagtacgactacagcttccctaccaca
gccaagcgggagatcatgcgtgacatcaaggagaagcagtgctgcgtcgccccggacttt
gagcaggagatggccaccgctatgtcatccttctccctggagaaaagctacaaactgcct
gacagccaggtgatcaccattggcaacatgcagttccagtgtttggaggtgttgttccag
cccttctttctgggtgtggaattttgcagcatccatgagaccaccttcagctctatcata
aggtgtgatgtgggcatccacaaggacctgtatgccaacacggtgctggccagtggcacc
accatgtacccaagcatctccaacaggatgcagaaagagatcactgccctggtgccagca
caaggaagatcaagatcatcgtgctcccagagcgcaagtactccgtgtgatcccctgggc
ccgtttgttgtcgggggagaagacttagacccttttgggcctcggagaggtggcatgatt
gtggatcccctgagatctggcttcccaagagcacttattgacccttcctcaggcctcccg
aaccgacttcctccaggcgctgtgcccccaggagctcgctttgacccctttggacccatt
gggaccagcccacccggacctaacccagaccatctccccccgccgggctacgatgacatg
tacctgtga

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_4|349_aa
MRPGDPASPGLRLVRFGLPGPASVGKGRSRGCGLGRRERARWAAGVLGLSARNFGYNSVD
LRVRICAPQGFVYNSCVCLSTGFCEASPTAAVRPSLRVSVRAAAAKGPRDELGPSFPMAS
PPGLELKTLSNGPQAPRRSAPLGPVAPTREGVENACFSSEEHETHFQNPGNTRLGSSPSP
PGGVSSLPRSQRDDLSLHSEEGPALEPVSRPVDYGFVSALVFLVSGILLVVTAYAIPREA
RVNPDTVTAREMERLEMYYARLGSHLDRCIIAGLGLLTVGGMLLSVLLMVSLCKGELYRR
RTFVPGKGSRKTYGSINLRMRQLNGDGGQALVENEVVQVSETSHTLQRS

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_4|1050_bp
atgcgaccaggggacccggcctccccgggcctccgcctggtccggttcggccttccgggt
cccgcgtctgtgggcaagggcaggagcagggggtgtggactgggccggcgggagcgggcg
cggtgggcagccggcgtgctggggctttctgcgcgcaactttgggtacaacagcgtggac
ctgcgtgtgcgtatctgcgcgccccaaggctttgtgtacaactcgtgcgtgtgtctatcg
actgggttttgtgaagcttcacccacagccgctgtgcgtccctctctccgggtgtcagtg
cgcgcggcggctgccaaggggccaagggatgagctggggccctccttcccaatggcatct
ccccctggtctggaactgaagacactgagcaatggtccccaagccccaaggagatcagct
cccctgggcccagtggccccaaccagggagggtgtggagaatgcctgcttctcctcagag
gagcatgagacccatttccagaaccctgggaacacgagactgggcagctcacccagtccc
cctgggggtgtctcctcactgccccgatcccagcgggatgatctgtcccttcattcagag
gaggggccagccctggagcccgtgagccgcccggtggattatggctttgtttccgccctc
gttttcctggtgagtgggattcttctggtggtgacagcatacgccatcccccgtgaggct
cgagtcaatccggacacagtgacagcgcgggagatggaacgactggagatgtactacgcc
cgcctaggctcccacctggacaggtgcatcatcgcaggcctcgggctgctcacggtgggc
ggcatgctcttgtcggtgctgctcatggtctccctgtgcaagggcgagctgtaccgccgg
aggaccttcgtccccggcaagggctccaggaagacctacggctccattaacctgcgcatg
agacagctcaatggggatgggggccaggccctggtggagaatgaagttgtccaggtctca
gagactagccacaccctccagaggtcttaa

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_5|272_aa
MASHSSPMGSQYYYGFPGPDSAMHALNTVVSEKDLTLDLSGLVARNKRCGPHSYSLNTHL
LHACLRLPTQRENTTLKTFIPQGWEIHTDQVEREAECQPGRLKICVHDTAQELPLASTAR
NALLGRNLCLFRQSSTTQMPDEIPISLDDRMRPPSLKKKKEWEKRKRKRNEKEKEEEEEE
EKEKKKKKKKKKKKKKKKKKKKKKKKEEEEEWEKRKRKRKEKEKEEEEKKTKKNKKKKKK
NRRRRRRRRKNKKKEEEKEGWRRNEYFRLGSL

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_5|819_bp
atggccagccattcttcacccatgggcagccaatactactatggattccctgggccagac
tctgcaatgcatgctttgaacacagtggtgagcgagaaagacctcacgcttgacctctca
gggcttgtggcccgcaacaaacgctgtgggccccactcatattccctcaacactcacctt
ctccatgcgtgcctacggcttcctactcagagagagaacacaacactcaagacttttatt
ccccaaggctgggagatccatacagaccaggtggaaagggaggcagaatgccagccaggc
cggctgaagatttgtgtgcatgatacagctcaggaacttccacttgctagcacagcacgc
aatgctcttcttggcaggaatctttgcctcttccggcagagcagtaccactcagatgcca
gatgaaatccccatcagcctggatgacagaatgaggcccccatctctgaagaagaagaag
gagtgggagaagaggaagaggaagaggaatgagaaggagaaggaggaggaggaggaggag
gagaaggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaaggaggaggaggaggagtgggagaagaggaagaggaagaggaag
gagaaggagaaggaggaggaggagaagaagacgaagaagaataagaagaagaagaagaag
aacagaagaagaaggagaagaagaagaaagaacaagaagaaggaggaggagaaggaggga
tggagaagaaatgaatatttcaggctgggtagtttatga

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_6|295_aa
MEERVSVIEDQMNEMKREEKFREKRVKRNEQSLQEMWDYVKRPNLHLIGVPESDGENGTK
LENTLQDIIQENFPNLARQANIQIQEIQRTPQRDSSRRATPRHIIVRFTKVEMKEKMLRA
AREKVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIISAQNLLKLISNFS
KVSEYKINVRKSQTFLYTNNRQTESQIMKLEKTTLKFTWNQKRAHIAKTILSQKNKAGGV
TLPNFKLYYKATVTKTAWYWYRNRDIDQWNRTEPSEIIPHIYNHLIFDKPDKNKK

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_6|888_bp
atggaagaaagggtatcagtgattgaagatcaaatgaatgaaatgaagcgagaagagaag
tttagagaaaaaagagtaaaaagaaatgaacaaagcctccaagaaatgtgggactacgtg
aaaagaccaaatctacatctgattggtgtacctgaaagtgacggagagaatggaaccaag
ttggaaaacactcttcaggatatcatccaggagaacttccccaacctagcaaggcaggcc
aacattcaaattcaggaaatacagagaacgccacaaagagactcctcgagaagagcaact
ccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggca
gccagagagaaagtgttggaagttctcgccagggcaatcaggcaagagaaagaaataaag
ggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgta
tatttagaaaaccccatcatctcagcccaaaacctccttaagctgataagcaacttcagc
aaagtctcagaatacaaaatcaacgtgcgaaaatcacaaacattcctatacaccaataac
agacaaacagagagccaaatcatgaaattggaaaaaactactttaaagttcacatggaac
caaaaaagagcccacattgccaagacaatcctaagccaaaagaacaaagctggaggcgtc
acgctacctaacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccgaaacagagatatagaccaatggaacagaacagagccctcagaaataataccacac
atctacaaccatctcatctttgacaaacctgacaaaaacaagaaatga

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_7|196_aa
MGPRPHPCHAPAQVSQVRAPGQSRRLRTRTGLVDLPKENFEASYNAITLPEEFHDFDTQN
MNAIDVSEHFTQNQSRPEEITLRENFDNDLIFQAESFDRFFFPFARDSSSSGGRNPVMVL
DLFPLPPGIGMRIEESNKMGMQSFSLMKLCRNSDRKQAAAKFYSFLVLKKQLAIELSQSA
PYADIIATMGPMFYNI

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_7|591_bp
atggggcccaggccccatccctgtcatgcccctgctcaggtgtctcaggtccgagcgcca
ggacaaagccggagactgcgcactaggaccggactggttgaccttccaaaagagaatttt
gaagcatcttacaatgctatcacattgccagaagaatttcatgattttgacacccaaaat
atgaatgctattgatgtttcagaacactttactcagaaccaaagcagaccagaagaaatc
actcttagagaaaattttgacaatgatctaattttccaagctgagagctttgacaggttc
ttcttcccttttgcccgtgacagctccagcagtggtggcaggaatcctgtcatggtcctc
gatctctttcctctgccacctggtattggcatgagaatagaggaatctaacaagatggga
atgcagtcctttagtctgatgaagctctgtagaaatagtgaccgaaaacaagcagctgcc
aaattttatagctttcttgtcctaaagaaacagctggctattgagctgagccagagtgct
ccctatgcagatattatagctacgatgggaccaatgttttataacatatga

>gi568815578f:1018774_1265077|GENSCAN_predicted_peptide_8|21_aa
PTQCEDHEDEDLYVDPLPLNE

>gi568815578f:1018774_1265077|GENSCAN_predicted_CDS_8|66_bp
cctactcagtgtgaagaccatgaagatgaagacctttatgttgatccacttccacttaat
gaatag