GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:19:25

Sequence gi568815579r:47121805_47332602 : 210798 bp : 50.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   3292   3476  185  2  2   86   39    95 0.414   2.11
 1.02 PlyA +   3820   3825    6                               1.05

 2.00 Prom +   4485   4524   40                              -2.86
 2.01 Init +   9019   9224  206  0  2   34   49   344 0.956  21.42
 2.02 Intr +  21690  21801  112  0  1   63   85    74 0.983   4.98
 2.03 Intr +  28398  28571  174  2  0   52   87   184 0.996  14.84
 2.04 Intr +  31094  31236  143  1  2  119   89    56 0.999   7.95
 2.05 Intr +  33310  33409  100  1  1   88   95    97 0.997  10.51
 2.06 Intr +  48014  48119  106  1  1   91  100   108 0.991  12.09
 2.07 Intr +  49014  49129  116  1  2  101   83    17 0.890   2.67
 2.08 Intr +  72266  72406  141  1  0   67  106    60 0.301   6.25
 2.09 Intr +  72883  72928   46  0  1   46   76    23 0.506  -5.12
 2.10 Intr +  75429  75573  145  1  1   96   77    65 0.866   5.54
 2.11 Intr +  81867  81936   70  0  1  131   93    54 0.943   9.38
 2.12 Term +  87355  87447   93  0  0  120   43   113 0.993   7.83
 2.13 PlyA +  88366  88371    6                               1.05

 3.06 PlyA -  88711  88706    6                               1.05
 3.05 Term - 100114  99998  117  1  0  136   43    67 0.804   5.54
 3.04 Intr - 104950 104760  191  2  2   91  100   290 0.992  29.80
 3.03 Intr - 106642 106354  289  1  1  156  113   184 0.983  24.52
 3.02 Intr - 118140 118007  134  1  2   27   52    67 0.045  -2.64
 3.01 Init - 118996 118951   46  1  1   80  110    36 0.586   3.99
 3.00 Prom - 126719 126680   40                              -5.46

 4.00 Prom + 128975 129014   40                              -6.16
 4.01 Init + 136370 136420   51  1  0   86   44    27 0.514  -0.74
 4.02 Intr + 136755 136859  105  2  0   57   49   231 0.949  16.51
 4.03 Intr + 138517 138618  102  0  0   91   97   157 0.999  17.27
 4.04 Intr + 138784 139035  252  0  0  113   97    61 0.991   7.13
 4.05 Intr + 142799 142882   84  1  0   99   60   195 0.999  17.82
 4.06 Intr + 142969 143142  174  0  0  115   94   336 0.996  37.04
 4.07 Intr + 144807 144988  182  2  2   47   76   329 0.999  26.27
 4.08 Intr + 148603 148649   47  1  2  117  101    22 0.592   4.45
 4.09 Intr + 148749 148884  136  1  1   88   75    81 0.998   6.43
 4.10 Intr + 149278 149383  106  1  1  115   94    58 0.996   9.32
 4.11 Intr + 149470 149845  376  0  1   74   76   399 0.998  31.89
 4.12 Intr + 150265 150357   93  2  0   67   75    50 0.741   1.54
 4.13 Intr + 151553 151602   50  0  2  129   69    81 0.058   8.70
 4.14 Intr + 153434 153540  107  1  2   23   60   145 0.167   4.21
 4.15 Intr + 153921 154072  152  0  2  114   77   -36 0.169  -2.29
 4.16 Intr + 155997 156066   70  1  1  113  101    23 0.056   4.34
 4.17 Intr + 178207 178306  100  1  1   21  119   -17 0.000  -5.19
 4.18 Intr + 188266 188394  129  0  0  105   66    17 0.396   2.09
 4.19 Term + 197977 199026 1050  0  0  118   48  1560 0.992 147.14
 4.20 PlyA + 200243 200248    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 151553 151656  104  0  2  129   47   115 0.935   9.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579r:47121805_47332602|GENSCAN_predicted_peptide_1|61_aa
XPGMALGRVIYTVSEEAFTEKFLQSVEEALPFGTNAWRTKEETIGQREAFPFCWNLLTTN
P

>gi568815579r:47121805_47332602|GENSCAN_predicted_CDS_1|186_bp
nttcctgggatggctctagggagggttatttacactgtgagtgaggaggcattcacagag
aagttcctccagagtgtggaagaagcactaccatttggcaccaacgcctggagaacaaag
gaggagaccattggccaaagagaggcatttccattttgttggaacctgctgaccaccaac
ccatag

>gi568815579r:47121805_47332602|GENSCAN_predicted_peptide_2|483_aa
MRRSTPGVLPAAVGGARVRRAVGLSGTGAEAGRAGAMVEKEEAGGGISEEEAAQYDRQIR
LWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRT
GSVGRNRAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQ
ICHKNSIKFFTGDVFGYHGYTFANLGEHEFVEEKTKVAKVSQGVEDGPDTKRAKLDSSET
TMVKKKVVFCPVKEALEVDWSSEKAKAALKRTTSDYFLLQEFFLCLKTILTLMKGGVVFP
LAINELLISPSLLVVKRLLASVEPPVVASKTVSSSVVLPPIAFTDAETKIHSLAIGPLAP
RSVWHKAGYLWTRCSGQLEGVVLLKFRTDKGRDPSSDTYEEDSELLLQIRNDVLDSLGIS
PDLLPEDFVRYCFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNGIVECL
GPK

>gi568815579r:47121805_47332602|GENSCAN_predicted_CDS_2|1452_bp
atgcgcagaagcactccgggcgtgctgccggcggcggtaggtggcgcgcgggtccggcgg
gcggttggcttgagcgggaccggagctgaggcaggaagagccggcgccatggtggagaag
gaggaggctggcggcggcattagcgaggaggaggcggcacagtatgaccggcagatccgc
ctgtggggactggaggcccagaaacggctgcgggcctctcgggtgcttcttgtcggcttg
aaaggacttggggctgaaattgccaagaatctcatcttggcaggagtgaaaggactgacc
atgctggatcacgaacaggtaactccagaagatcccggagctcagttcttgattcgtact
gggtctgttggccgaaatagggctgaagcctctttggagcgagctcagaatctcaacccc
atggtggatgtgaaggtggacactgaggatatagagaagaaaccagagtcatttttcact
caattcgatgctgtgtgtctgacttgctgctccagggatgtcatagttaaagttgaccag
atctgtcacaaaaatagcatcaagttctttacaggagatgtttttggctaccatggatac
acatttgccaatctaggagagcatgagtttgtagaggagaaaactaaagttgccaaagtt
agccaaggagtagaagatgggcccgacaccaagagagcaaaacttgattcttctgagaca
acgatggtcaaaaagaaggtggtcttctgccctgttaaagaagccctggaggtggactgg
agcagtgagaaagcaaaggctgctctgaagcgcacgacctccgactactttctccttcaa
gaattctttctctgcctcaaaaccatcctcacgcttatgaaaggtggggttgtttttcct
cttgctattaatgaactacttatcagtccatctttgctggtggtcaagagactgttagct
tcagtggagccacctgttgtagcttctaaaactgtgtcctcctcagttgttctcccaccc
attgccttcacagatgcagagaccaagattcactcactcgccattggacctttagcaccc
aggtctgtctggcacaaagcaggttacctgtggacaaggtgtagtgggcagttagaaggt
gttgtgctcttaaagttccgtacagataaaggaagagatcccagttctgatacatatgag
gaagattctgagttgttgctccagatacgaaatgatgtgcttgactcactgggtattagt
cctgacctgcttcctgaggactttgtcaggtactgcttctccgagatggccccagtgtgt
gcggtggttggagggattttggcacaggaaattgtgaaggccctgtctcagcgggaccct
cctcacaacaacttcttcttcttcgatggcatgaaggggaatgggattgtggagtgcctt
ggccccaagtga

>gi568815579r:47121805_47332602|GENSCAN_predicted_peptide_3|258_aa
MRPGTLAQGGGSVPTAPRGPVPRPPRRGLPQIRADAAVANERARRLRELGRLCPPGIGHA
APGSAMARARQEGSSPEPVEGLARDGPRPFPLGRLVPSAVSCGLCEPGLAAAPAAPTLLP
AAYLCAPTAPPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGAL
AGGPTQAAPGVRGEEEQWAREIGAQLRRMADDLNAQYERRRQEEQQRHRPSPWRVLYNLI
MGLLPLPRGHRAPEMEPN

>gi568815579r:47121805_47332602|GENSCAN_predicted_CDS_3|777_bp
atgaggcctgggaccctggcgcaaggtggggggtcggtgccaacagctccccggggcccg
gttccccgccccccgcgccgagggctcccccagatccgggcggacgcggcggtggccaat
gagcgcgctcgccgtctccgggagctgggccggctctgcccgcctggcattgggcacgcg
gccccagggagcgccatggcccgcgcacgccaggagggcagctccccggagcccgtagag
ggcctggcccgcgacggcccgcgccccttcccgctcggccgcctggtgccctcggcagtg
tcctgcggcctctgcgagcccggcctggctgccgcccccgccgcccccaccctgctgccc
gctgcctacctctgcgcccccaccgccccacccgccgtcaccgccgccctggggggttcc
cgctggcctgggggtccccgcagccggccccgaggcccgcgcccggacggtcctcagccc
tcgctctcgctggcggagcagcacctggagtcgcccgtgcccagcgccccgggggctctg
gcgggcggtcccacccaggcggccccgggagtccgcggggaggaggaacagtgggcccgg
gagatcggggcccagctgcggcggatggcggacgacctcaacgcacagtacgagcggcgg
agacaagaggagcagcagcggcaccgcccctcaccctggagggtcctgtacaatctcatc
atgggactcctgcccttacccaggggccacagagcccccgagatggagcccaattag

>gi568815579r:47121805_47332602|GENSCAN_predicted_peptide_4|1121_aa
MEVAVERRESEGYNSLGAATLDLKSKEEKDAELDKRIEALRRKNEALIRRYQEIEEDRKK
AELEGVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPGASKGGRTPPQQGGRAG
MGRASRSWEGSPGEQPRGGGAGGRGRRGRGRGSPHLSGAGDTSISDRKSKEWEERRRQNI
EKMNEEMEKIAEYERNQREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWG
GPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSEYLRWKQEREKIDQERLQRHRK
PTGQWRREWDAEKTDGMFKDGPVPAHEPSHRYDDQAWARPPKPPTFGEFLSQHKAEASSR
RRRKSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIPAP
AHRPPEDEGEENEGEEDEEWEDISEDEEEEEIEVEEGDEEEPAQDHQAPEAAPTGIPCSE
QAHGVPFSPEEPLLEPQAPGTPSSPFSPPSGHQPVSDWGEEVELNSPRTTHLAGALSPGG
GQSAPAFPESGPSLRGTQEAEEEGSEATPEAGPEGQETAEITDFQRLQLPLSRRRRYSDP
DRRPSRQTPRETPEAAEGRRPGDASPPKFVWERPSWGVAFVCFVPGGLFPFLKELFFSWS
REKQLSSSRAFEGFKSPSWDPLGIASQSKALATSKCLAHPPASSCLYPSPGAYCGLWALL
RPPVVLEFLALTLQGWDVAMGIRLSRLWEQQQPRGAGAREDSPGEGTLELGLDSFNYTTP
DYGHYDDKDTLDLNTPVDKTSNTLRVPDILALVIFAVVFLVGVLGNALVVWVTAFEAKRT
INAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLILLNMYASILLLAT
ISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVREEYFPPKVLCG
VDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRATRSTKTLKVVVAVVA
SFFIFWLPYQVTGIMMSFLEPSSPTFLLLKKLDSLCVSFAYINCCINPIIYVVAGQGFQG
RLRKSLPSLLRNVLTEESVVRESKSFTRSTVDTMAQKTQAV

>gi568815579r:47121805_47332602|GENSCAN_predicted_CDS_4|3366_bp
atggaggtggcagttgaaaggagggagagtgagggctacaattctcttggggcagccaca
ctcgatttgaaatcaaaggaggagaaggatgctgagttggacaagaggatcgaggctctt
cggcggaagaatgaggccctcatccggcgctaccaggagattgaggaagaccgtaagaaa
gctgaacttgagggagtcgcagtcacagctccccgaaagggccgctcagtggagaaggag
aacgtggcagtggagtcggagaagaacctgggtccttcccggaggtctcctgggacccct
cggcccccaggggccagcaaggggggccggactcctccacagcagggaggccgggccggc
atgggccgagcatcgcgcagctgggagggcagccccggggagcagcctcgaggaggagga
gctgggggccgtggccggaggggccggggccgaggttcacctcacctctctggagctgga
gacacctcaatctctgaccgtaaatccaaggagtgggaggagcggcgcaggcagaacatt
gagaagatgaatgaggagatggagaagatcgccgagtatgagcgcaaccagcgggaaggg
gttcttgaacccaacccagtgcggaacttcctggacgacccccggcgacgcagcgggccc
ctggaggagtctgagcgggaccgccgggaggagagccgccggcacggccgcaactggggg
ggccccgacttcgagcgggtgcgctgtggccttgagcacgagcggcagggccgccgagct
ggcctgggcagtgctggagacatgacgttgtccatgacgggccgggagcggtcggagtac
ctgcgctggaagcaggagagggagaagatcgaccaggagcggctgcagaggcaccgcaag
cccactggccagtggaggcgcgagtgggatgccgagaagaccgatgggatgttcaaggat
ggcccagtccctgcccatgaaccatcccaccgctatgatgaccaggcctgggcccggccc
ccgaagccccctacttttggggagttcctgtcccagcacaaagctgaggccagcagccgc
agaaggagaaagagcagtcggccccaggccaaggcagcgcccagggcctacagtgaccat
gatgaccgctgggagacaaaagaaggggcagcatccccagcccctgagactccacagcct
acttcccccgagacttcccccaaggagacacccatgcagccacccgagatcccagctcct
gcccaccggcctcctgaagacgagggggaagagaatgagggggaagaggatgaagaatgg
gaggacataagtgaggatgaggaagaggaggagatcgaggtggaagaaggtgatgaggag
gaaccagcccaagaccaccaagccccagaggctgcccccaccgggatcccctgcagtgag
caggcccacggagtccccttcagtccggaggagcccctgctggagccccaggcccctggc
acgccttccagccctttctcaccacccagcggccaccagcctgtgtccgattggggtgaa
gaggtggagctgaattctccccggaccactcacctggctggcgccctctccccgggaggt
ggccagtcagcccctgccttcccggagagtgggcccagcctccgaggaacccaggaagct
gaagaggaagggtctgaggcaactccagaggcaggccccgaaggccaggagacggcggag
atcaccgacttccagaggctccagctgccgctgagccgccgccgccgctacagcgaccct
gaccgccgtccgagccgccagacacccagagagacgccagaggccgcggaggggcgaaga
cccggagatgcctcccctcccaagtttgtgtgggaaagaccttcctggggtgtggccttt
gtctgttttgtcccgggtgggctgttccccttccttaaggagctcttcttttcttggagt
agggagaagcagcttagcagcagcagggcctttgaagggtttaaaagccccagctgggat
cctctggggatagcaagtcagtccaaagccctggccaccagcaaatgcttggcgcatcct
ccagcttcctcctgcctgtatccctcccccggtgcttattgcggcctctgggccttactc
agaccccccgtggtgctagagtttctggctctcacactccagggctgggatgtggccatg
ggaataagattgtcaagattgtgggagcaacagcaacctcgtggggctggggcccgagaa
gattccccaggggaggggacccttgagttgggtctagactccttcaattataccacccct
gattatgggcactatgatgacaaggataccctggacctcaacacccctgtggataaaact
tctaacacgctgcgtgttccagacatcctggccttggtcatctttgcagtcgtcttcctg
gtgggagtgctgggcaatgccctggtggtctgggtgacggcattcgaggccaagcggacc
atcaatgccatctggttcctcaacttggcggtagccgacttcctctcctgcctggcgctg
cccatcttgttcacgtccattgtacagcatcaccactggccctttggcggggccgcctgc
agcatcctgccctccctcatcctgctcaacatgtacgccagcatcctgctcctggccacc
atcagcgccgaccgctttctgctggtgtttaaacccatctggtgccagaacttccgaggg
gctggcttggcctggatcgcctgtgccgtggcttggggtttagccctgctgctgaccata
ccctccttcctgtaccgggtggtccgggaggagtactttccaccaaaggtgttgtgtggc
gtggactacagccacgacaaacggcgggagcgagccgtggccatcgtccggctggtcctg
ggcttcctgtggcctctactcacgctcacgatttgttacactttcatcctgctccggacg
tggagccgcagggccacgcggtccaccaagacactcaaggtggtggtggcagtggtggcc
agtttctttatcttctggttgccctaccaggtgacggggataatgatgtccttcctggag
ccatcgtcacccaccttcctgctgctgaagaagctggactccctgtgtgtctcctttgcc
tacatcaactgctgcatcaaccccatcatctacgtggtggccggccagggcttccagggc
cgactgcggaaatccctccccagcctcctccggaacgtgttgactgaagagtccgtggtt
agggagagcaagtcattcacgcgctccacagtggacactatggcccagaagacccaggca
gtgtag