GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:40:34

Sequence gi568815580r:60271354_60472349 : 200996 bp : 35.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3084   3123   40                              -3.65
 1.01 Sngl +  32281  32883  603  0  0   43   42   288 0.973  15.64
 1.02 PlyA +  33469  33474    6                               1.05

 2.00 Prom +  34224  34263   40                              -3.75
 2.01 Init +  49287  49396  110  2  2   71   70    82 0.052   4.44
 2.02 Intr +  57882  57992  111  0  0   81   98    50 0.078   3.88
 2.03 Term +  58175  58181    7  2  1  133   47     0 0.030  -3.24
 2.04 PlyA +  58281  58286    6                               1.05

 3.04 PlyA -  58865  58860    6                               1.05
 3.03 Term -  61239  61187   53  1  2  112   34    55 0.002  -0.89
 3.02 Intr -  78620  78572   49  2  1  119   21    76 0.016   1.33
 3.01 Init -  96264  96184   81  0  0  108   58    88 0.237   8.82
 3.00 Prom -  96437  96398   40                              -6.75

 4.02 PlyA -  96512  96507    6                               1.05
 4.01 Sngl - 100996  99998  999  1  0  103   36   375 0.895  30.47
 4.00 Prom - 111718 111679   40                              -4.45

 5.00 Prom + 112312 112351   40                              -3.75
 5.01 Init + 116373 116424   52  2  1   83   63    42 0.156   2.57
 5.02 Intr + 121164 121261   98  1  2   54  108    21 0.055  -0.49
 5.03 Intr + 128459 128562  104  1  2   58   67   134 0.165   6.35
 5.04 Term + 139430 139499   70  2  1   81   43   102 0.915   1.43
 5.05 PlyA + 139634 139639    6                               1.05

 6.02 PlyA - 141725 141720    6                               1.05
 6.01 Sngl - 160852 159647 1206  1  0   26   44   327 0.569  17.67
 6.00 Prom - 170793 170754   40                              -1.65

 7.03 PlyA - 170897 170892    6                               1.05
 7.02 Term - 182978 182942   37  1  1   95   37    50 0.671  -3.57
 7.01 Init - 183744 183326  419  0  2   71   53   174 0.583   8.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  50445  50277  169  2  1   31   42   157 0.842   1.77
S.002 Init + 137423 137499   77  1  2   83   79    59 0.917   5.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_1|200_aa
MNIDAKILSKIQANRIQQHMKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTNDKNHM
IISIDVDKPFDKIQQPFMLKTLNKLGIDVTYLKIIRAIYDKPTANIILNGQKPEAFPLKT
GTRQGCPLSPLLFNIVLEVLARAIGQKKEIKGIQLGKEEVKLSLFADDMLMYLENPIVSS
QNLLKLISNFSKVSGYKINV

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_1|603_bp
atgaacatcgatgcaaaaatcctcagtaaaatacaggcaaaccgaatccagcagcacatg
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaagtcaataaatgtaatccagcatatcaacagaaccaacgacaaaaaccacatg
attatctcaatagatgtagacaagcccttcgacaaaattcagcaacccttcatgctaaaa
actctcaataaattaggtattgatgtgacgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaaccggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcgggcagaagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgcttatgtatctagaaaaccccattgtctcatcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
taa

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_2|75_aa
MHGKYPGGSGGGATGEYAPEGYGRVHYDGRLSAKVLWTCQAVSTSVPENLLFLLICTFPY
LSYGWLLVITQISQR

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_2|228_bp
atgcatgggaaatatcctggtgggagtggtggaggtgccacgggtgaatatgctccagag
ggttatgggagggtgcactatgatgggaggctgtcagcaaaagtgctctggacatgccaa
gctgtttcaacctctgtgcctgagaacctgctgtttcttcttatctgcacatttccctac
ttgtcatatggctggctccttgtcatcactcagatctcacagaggtaa

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_3|60_aa
MGVLQSDFIRQVLLYGEEKGVEGDRNMAVDPSSSRSLLDDRILGKSGIYSWFGSIAGEPV

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_3|183_bp
atgggtgtcctacaatctgacttcatcagacaagtgcttctttatggtgaggaaaaggga
gtggaaggagaccggaacatggctgttgaccccagcagcagccgcagccttctggatgat
agaattctaggtaaatcagggatttattcttggtttggatccattgctggtgaacctgtg
tga

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_4|332_aa
MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYSDGGCYEQLFVSPEVFVTLGVISLL
ENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNSTDTDAQSFTVN
IDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVS
GILFIIYSDSSAVIICLITMFFTMLALMASLYVHMFLMARLHIKRIAVLPGTGAIRQGAN
MKGAITLTILIGVFVVCWAPFFLHLIFYISCPQNPYCVCFMSHFNLYLILIMCNSIIDPL
IYALRSQELRKTFKEIICCYPLGGLCDLSSRY

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_4|999_bp
atggtgaactccacccaccgtgggatgcacacttctctgcacctctggaaccgcagcagt
tacagactgcacagcaatgccagtgagtcccttggaaaaggctactctgatggagggtgc
tacgagcaactttttgtctctcctgaggtgtttgtgactctgggtgtcatcagcttgttg
gagaatatcttagtgattgtggcaatagccaagaacaagaatctgcattcacccatgtac
tttttcatctgcagcttggctgtggctgatatgctggtgagcgtttcaaatggatcagaa
accattgtcatcaccctattaaacagtacagatacggatgcacagagtttcacagtgaat
attgataatgtcattgactcggtgatctgtagctccttgcttgcatccatttgcagcctg
ctttcaattgcagtggacaggtactttactatcttctatgctctccagtaccataacatt
atgacagttaagcgggttgggatcatcataagttgtatctgggcagcttgcacggtttca
ggcattttgttcatcatttactcagatagtagtgctgtcatcatctgcctcatcaccatg
ttcttcaccatgctggctctcatggcttctctctatgtccacatgttcctgatggccagg
cttcacattaagaggattgctgtcctccccggcactggtgccatccgccaaggtgccaat
atgaagggagcgattaccttgaccatcctgattggcgtctttgttgtctgctgggcccca
ttcttcctccacttaatattctacatctcttgtcctcagaatccatattgtgtgtgcttc
atgtctcactttaacttgtatctcatactgatcatgtgtaattcaatcatcgatcctctg
atttatgcactccggagtcaagaactgaggaaaaccttcaaagagatcatctgttgctat
cccctgggaggcctttgtgacttgtctagcagatattaa

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_5|107_aa
MGISDPGKNFSNGQWYGKDKLGWKSEMTSCESTEKGVSLLKLKDIFFCYQITEWVKVSTI
TNEKRANMAQKSDGNKLGFDELKFSFWTLGETYTSGLPGALRPLATD

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_5|324_bp
atggggatttcagacccagggaaaaactttagcaatggtcagtggtatggaaaggataaa
ttgggatggaaatcggaaatgactagctgtgaaagcactgaaaaaggagtatctctgtta
aaattaaaagacatatttttctgttaccaaataactgagtgggtgaaggtgtcaacaatt
actaatgaaaaaagggcaaatatggcacagaaatcggatggtaataagcttggttttgat
gaattaaagttcagcttttggactcttggagagacttacaccagtggtttgccaggggct
ctcaggcctttggccacagactaa

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_6|401_aa
MSFKIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNRWKNIPCSWVGRINIVKMA
ILPKVIHRFNAIPIKLPMTFFTELEKTTFKYIWNQKRARITKSILSQKNKAGGITLPDFK
LYYKATVAKTAWYWYQNRDIDQCNRTEPSEIMPHVYNYLIFDKPEKNKQWGKDSLLNKWC
WENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTMKTLEENLVITIQDIGMGKDFMS
KTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPAEWEKIFATYSSDKGLISRIYNE
LKQIHKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQFKTTMRYHLTP
VRMVIIKKSGNNRCWRGCGEIGTLLHCWWDCKVVQPLWKSV

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_6|1206_bp
atgtccttcaaaattgcttcaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggataca
aacagatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggcc
atactgcccaaggtaattcatagattcaatgccatccccatcaagctaccaatgactttc
ttcacagaattggaaaaaactactttcaagtacatatggaaccaaaaaagagcccgcatc
accaagtcaatcctgagccaaaagaacaaagctggaggcatcactctacctgacttcaaa
ctatactacaaggctacagtagccaaaacagcatggtactggtaccaaaacagagatata
gatcaatgcaacagaacagagccctcagaaataatgccgcatgtctacaactatctgatc
tttgacaaacctgagaaaaacaagcaatggggaaaggattccctattaaataaatggtgc
tgggaaaactggctagcaatatgcagaaagctgaaactcgatcccttccttacaccttat
acaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccatgaaaacc
ctagaagaaaacctagtcattaccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctgcagaatgg
gagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcaaacaaattcacaagaaaaaaacaaacaaccccattaaaaagtgggcaaaggatatg
aacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctca
ccatcactggctatcagagaaatgcaattcaaaaccacaatgagataccatctcacacca
gttagaatggtgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaa
ataggaacacttttacactgttggtgggactgtaaagtagttcaaccattgtggaagtca
gtgtag

>gi568815580r:60271354_60472349|GENSCAN_predicted_peptide_7|151_aa
MGKDFMSKTPKAMATKAKIDKRDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL
ISRIYNELKQIHKKKTNNPIKKWANDMNRHFSKEDMYAAKKHMKKCSSSLAIREMQIKTT
MRYHLTPVRMVIIKKSGNNRDMDEIGNHHSQ

>gi568815580r:60271354_60472349|GENSCAN_predicted_CDS_7|456_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaacgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggcta
atatccagaatctacaatgagctcaaacaaattcacaagaaaaaaacaaacaaccccatc
aaaaagtgggcaaatgacatgaacagacacttctcaaaagaagacatgtatgcagccaaa
aaacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagg
gacatggatgaaattggaaatcatcattctcagtaa