GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:52:05

Sequence gi568815580f:49462309_49686850 : 224542 bp : 45.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3097   3231  135  0  0   56  116    -1 0.156   0.26
 1.02 Term +   7629   7814  186  2  0   97   43   107 0.740   4.59
 1.03 PlyA +   8198   8203    6                               1.05

 2.07 PlyA -   8514   8509    6                               1.05
 2.06 Term -  20102  20037   66  2  0   96   43    66 0.800   0.84
 2.05 Intr -  27242  27051  192  2  0  131   94   226 0.973  27.19
 2.04 Intr -  28244  28146   99  2  0  102   75    12 0.739   1.61
 2.03 Intr -  28619  28485  135  2  0   74   94    90 0.981   8.96
 2.02 Intr -  30158  29967  192  2  0   63   44    79 0.046   0.69
 2.01 Init -  33618  32995  624  0  0   82   48   379 0.024  28.65
 2.00 Prom -  44792  44753   40                              -3.46

 3.05 PlyA -  45891  45886    6                               1.05
 3.04 Term -  53354  53284   71  0  2  -30   44   156 0.709  -2.50
 3.03 Intr -  54750  54635  116  2  2   92   92    57 0.871   6.59
 3.02 Intr -  55272  55224   49  1  1   74   68    35 0.585  -2.16
 3.01 Init -  56706  56643   64  0  1   76   85    32 0.561   3.02
 3.00 Prom -  58879  58840   40                              -3.16

 4.00 Prom +  59845  59884   40                              -3.26
 4.01 Init +  65776  65858   83  0  2   77   62    76 0.544   4.34
 4.02 Intr +  99025  99152  128  1  2   11   84   137 0.438   5.92
 4.03 Intr + 103009 103190  182  2  2  102  101   116 0.975  13.89
 4.04 Intr + 105134 105313  180  1  0   83   84   203 0.995  19.46
 4.05 Intr + 107129 107240  112  1  1   75   99   138 0.775  13.55
 4.06 Intr + 113061 113282  222  1  0   98   81   364 0.831  34.80
 4.07 Intr + 119107 119349  243  2  0   79   76   223 0.994  17.67
 4.08 Intr + 120054 120174  121  1  1   44  101   113 0.995   7.75
 4.09 Intr + 121248 121466  219  0  0   42  100   275 0.990  21.52
 4.10 Intr + 124438 124542  105  1  0   96   91    55 0.847   5.93
 4.11 Intr + 137332 137354   23  1  2   86   47     0 0.023  -7.11
 4.12 Intr + 138744 138764   21  1  0  122  100    -3 0.413   1.82
 4.13 Intr + 139080 139251  172  1  1   45  115   101 0.599   7.50
 4.14 Term + 142835 142976  142  2  1   79   38   105 0.688   2.00
 4.15 PlyA + 143593 143598    6                               1.05

 5.05 PlyA - 146920 146915    6                               1.05
 5.04 Term - 154838 154759   80  0  2   84   34    94 0.570   1.53
 5.03 Intr - 157604 157447  158  1  2   47  103    57 0.604   2.75
 5.02 Intr - 158831 158748   84  1  0   22   74   144 0.092   5.34
 5.01 Init - 168822 168701  122  0  2   68  113    45 0.099   3.87
 5.00 Prom - 176405 176366   40                              -5.26

 6.08 PlyA - 177252 177247    6                               1.05
 6.07 Term - 177741 177683   59  1  2   95   54    75 0.300   2.65
 6.06 Intr - 178733 178579  155  1  2   87   13    97 0.237   1.82
 6.05 Intr - 189089 188984  106  0  1   77   75    56 0.078   2.47
 6.04 Intr - 197255 197153  103  2  1   35   15   105 0.004  -2.35
 6.03 Intr - 211427 211323  105  2  0   63   66    56 0.125   1.31
 6.02 Intr - 218731 218603  129  1  0  141   52    78 0.934  10.39
 6.01 Init - 220855 220850    6  1  0   93   93     0 0.684   1.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  33618  32842  777  0  0   82   37   417 0.800  32.02
S.002 Init -  80339  80283   57  2  0   99   92    36 0.931   6.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_1|106_aa
ASCGAMVMNSLQGQLLAARLRKCCREFECSKSSDSSIPGYCLPDKELPRAIQLSPQVDAL
ILCHSQGVQPSGPYLPPYPPPAPGMPPVNPLAPGLVGPGVIVDKKM

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_1|321_bp
gcctcctgtggtgctatggtaatgaattccttgcaaggccagctgttagcagcaagactc
agaaagtgctgcagagagtttgaatgctccaaaagcagtgactccagcattcctgggtat
tgcctgcctgataaggagctccccagggcaatccagctttccccccaggtggacgccctc
atcctgtgccacagccagggtgtccaaccttcgggtccctaccttcctccatacccacca
cctgcccctggaatgcctcctgtgaatcccttggcccctggcttggttggaccaggagtg
atagtggacaagaagatgtag

>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_2|435_aa
MVSAFVIMYSHEEDIDSAIEVFTHTIQWCQNHWPKSPAHLSLIREAANFKLKYRQKKEAI
SDLEQQWKQNPKDFHTLTQLISAYSLVDPEKDKALCEHLSLSDSMSLKVDVKALENSPGA
TYIWKKGGKVTGDSQQKEQGWGNLKKKKKMGKLPENYDPKVTPDPERWLPMQEHSYYWGR
KKGKKDQVGKGIQGATAGASSELDARKTQPEVSVSPALLRGPNPPAIAAILASGAPASRP
PGGELLGLLNPRWRRWLLMREDVAEGLTLGAGNTRETAQAIKGMHIRKATKYLKDVTLQK
QCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIE
HIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKGADMNG
LPTKGPTEICDKKKD

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_2|1308_bp
atggtgtctgcattcgtgatcatgtatagccatgaagaagatattgatagtgccattgag
gtcttcacacatactatccagtggtgtcaaaaccattggcccaaatctcctgctcatttg
tccttgataagagaagctgcgaacttcaaactcaaatatagacagaagaaggaggcaatt
agtgacctagaacaacaatggaaacaaaatccaaaagattttcacaccctgacacagctt
atttctgcttactcacttgtagatccagagaaagacaaagctctttgtgaacacttgtca
ttatcagatagcatgtctctaaaagtagatgtcaaggctcttgaaaattctcctggtgct
acgtacatttggaagaagggtggcaaagttactggagatagtcaacaaaaggagcaaggg
tggggaaatttgaaaaagaagaaaaagatgggaaaattgcctgagaattatgacccaaaa
gttaccccagatccagaaagatggctaccaatgcaagaacattcttattactggggaaga
aagaaaggtaaaaaggatcaggttggaaaagggatccagggagcaactgcaggagcttca
tcagaactggatgccagaaaaactcagcctgaggtgagtgtttctcctgcgttgctccga
gggcccaatcctcctgccatcgccgccatcctggcttcgggggcgccggcctccaggccc
ccgggaggagaactcctagggctactaaatcctcgctggaggcggtggcttcttatgcgg
gaggacgtggcggagggcctgactttgggagccgggaacactcgtgaaactgctcaggcc
atcaagggtatgcatatacgaaaagccacgaagtatctgaaagatgtcactttacagaaa
cagtgtgtaccattccgacgttacaatggtggagttggcaggtgtgcgcaggccaagcaa
tggggctggacacaaggtcggtggcccaaaaagagtgctgaatttttgctgcacatgctt
aaaaacgcagagagtaatgctgaacttaagggtttagatgtagattctctggtcattgag
catatccaagtgaacaaagcacctaagatgcgccgccggacctacagagctcatggtcgg
attaacccatacatgagctctccctgccacattgagatgatccttacggaaaaggaacag
attgttcctaaaccagaagaggaggttgcccagaagaaaaagggtgcagacatgaatgga
ttaccaacaaaaggaccaacagaaatctgtgataaaaagaaagactaa

>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_3|99_aa
MGVSKKRAASKTDVQAQLLQRGCRPTLQILDLPASIITYEPIRLSSVTPHGFQGQQVLLS
RKDSRSAGYFVSKDPNKYEQAKPYARINDTRIQEDSFDL

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_3|300_bp
atgggtgtaagcaagaaaagggcagcttcgaaaacagatgtgcaagcacagttgttgcag
cgaggctgcaggcctaccctgcagattttggacttgccagcctccatcatcacctatgag
cctattcgcctcagttcagttactcctcatggcttccagggccagcaagttctgctgagc
agaaaagacagtcgatcagctggttactttgtctcaaaagacccaaataagtatgaacaa
gcaaagccttatgcacgcatcaacgacaccaggattcaagaggacagctttgacctctag

>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_4|650_aa
MPKEKIKLKAESCKKLPFVPKQIATDKSFPNIPKPPIHYHPRIADERTASEKLAGSLGVL
QLVAERAFRADKLHKPKATQTEVKPSVRFNLRTSKDPEHEGCYLSVGHSQPLEDCSFNMT
AKTFFIIHGWTMSGIFENWLHKLVSALHTREKDANVVVVDWLPLAHQLYTDAVNNTRVVG
HSIARMLDWLQEKDDFSLGNVHLIGYSLGAHVAGYAGNFVKGTVGRITGLDPAGPMFEGA
DIHKRLSPDDADFVDVLHTYTRSFGLSIGIQMPVGHIDIYPNGGDFQPGCGLNDVLGSIA
YGTITEVVKCEHERAVHLFVDSLVNQDKPSFAFQCTDSNRFKKGICLSCRKNRCNSIGYN
AKKMRNKRNSKMYLKTRAGMPFRVYHYQMKIHVFSYKNMGEIEPTFYVTLYGTNADSQTL
PLEIVERIEQNATNTFLVYTEEDLGDLLKIQLTWEGASQSWYNLWKEFRSYLSQPRNPGR
ELNIRRIRVKSGETQRKLTFCTEDPENTSISPGRELWFRKCRDGWRMKNETRDFAFSIIC
RNMIRQGTTSITHIHEEWPGDVLPAEFPPVMGRDATWKEEQLREQEVQGEGIYELSPGHA
PAISKAAVLKTAACIPSVDLGPWFWKEKSKSYSQRIVFVCSNLSVGYLKD

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_4|1953_bp
atgccaaaggaaaaaatcaagctgaaagctgagtcatgcaagaagctgccttttgttcct
aagcagatagctacagataaaagttttcccaacatccctaagccgccgatacattatcac
ccacgtattgcggacgagagaaccgcctcggagaagctggctggctcgcttggagttttg
cagctagtggcggagcgagcattccgagcagataagctccacaaacccaaagctacacag
actgaggtcaaaccatctgtgaggtttaacctccgcacctccaaggacccagagcatgaa
ggatgctacctctccgtcggccacagccagcccttagaagactgcagtttcaacatgaca
gctaaaacctttttcatcattcacggatggacgatgagcggtatctttgaaaactggctg
cacaaactcgtgtcagccctgcacacaagagagaaagacgccaatgtagttgtggttgac
tggctccccctggcccaccagctttacacggatgcggtcaataataccagggtggtggga
cacagcattgccaggatgctcgactggctgcaggagaaggacgatttttctctcgggaat
gtccacttgatcggctacagcctcggagcgcacgtggccgggtatgcaggcaacttcgtg
aaaggaacggtgggccgaatcacaggtttggatcctgccgggcccatgtttgaaggggcc
gacatccacaagaggctctctccggacgatgcagattttgtggatgtcctccacacctac
acgcgttccttcggcttgagcattggtattcagatgcctgtgggccacattgacatctac
cccaatgggggtgacttccagccaggctgtggactcaacgatgtcttgggatcaattgca
tatggaacaatcacagaggtggtaaaatgtgagcatgagcgagccgtccacctctttgtt
gactctctggtgaatcaggacaagccgagttttgccttccagtgcactgactccaatcgc
ttcaaaaaggggatctgtctgagctgccgcaagaaccgttgtaatagcattggctacaat
gccaagaaaatgaggaacaagaggaacagcaaaatgtacctaaaaacccgggcaggcatg
cctttcagagtttaccattatcagatgaaaatccatgtcttcagttacaagaacatggga
gaaattgagcccaccttttacgtcaccctttatggcactaatgcagattcccagactctg
ccactggaaatagtggagcggatcgagcagaatgccaccaacaccttcctggtctacacc
gaggaggacttgggagacctcttgaagatccagctcacctgggagggggcctctcagtct
tggtacaacctgtggaaggagtttcgcagctacctgtctcaaccccgcaaccccggacgg
gagctgaatatcaggcgcatccgggtgaagtctggggaaacccagcggaaactgacattt
tgtacagaagaccctgagaacaccagcatatccccaggccgggagctctggtttcgcaag
tgtcgggatggctggaggatgaaaaacgaaaccagagattttgcttttagtatcatctgt
agaaatatgattagacaagggacaaccagtatcacacacattcatgaagaatggcctgga
gatgttttaccagcagaatttcctcctgtgatgggaagggacgccacctggaaagaggag
cagctacgggaacaggaggtgcaaggagaaggaatctatgaactgagtcctggacacgct
ccagctatcagcaaggcagcagtcctgaagactgcagcctgcattccaagtgtggatctt
ggtccctggttctggaaggagaagagcaagtcttattctcaaagaattgtgtttgtctgt
tctaacctgtctgtgggctacctgaaggactaa

>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_5|147_aa
MSWMAPEGLWALRCGPLELLRISDLQWGLNVPPQKLLTLPSTIRNGKDMKSTQMPINDRL
DKEKAKPGGCPRLVQAPTTDFWDSPNNTLNPCHTRWYLPSTSYRIPPQITAIQVALFIVL
YRPSDENPLSRTDLKAESEPPKAGMTP

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_5|444_bp
atgtcctggatggcacccgaaggcctctgggctttacgctgtgggcccctggagctactg
aggatttctgatctgcagtggggcctaaatgtgcccccacaaaagctcctaacacttcca
agcactattcgcaacggcaaagacatgaagtcaacccaaatgcccatcaatgatagactg
gataaagaaaaggcgaaacctgggggatgccctcggctggtgcaggcacccacaacagat
ttctgggactctcccaacaataccctaaacccctgtcacacgcgttggtacctccctagt
actagctatcgcattccaccacagatcacagccatccaagtggctctgttcattgttctt
taccgcccttctgatgaaaacccactctcaagaacggacctgaaagcagaatcagagcca
ccgaaagctggaatgacaccttga

>gi568815580f:49462309_49686850|GENSCAN_predicted_peptide_6|220_aa
MTVLQLLLCPMDFVREDWPLVDLVNTTQDPSALGFYLLSNPIPDWKVDLQPTPALRAEGF
ASGQTKPVWCALVEEVGGKQNGKVEKPSNFTVEKPDKFHLRQVIKVNINSDKLCQRAMLR
EGEESRTQHGKQEWGKTATAGWKTVQQIEGTRRPGGAPATPTSPGMPAPLTKQRIGEEEN
CLSLNGPPYNLPLLEEEEDKPENSTVTKNVMIQTTLAAQM

>gi568815580f:49462309_49686850|GENSCAN_predicted_CDS_6|663_bp
atgactgtcctgcagcttctcctttgccccatggattttgtaagagaagactggcctttg
gtagatctcgtcaacacaacccaagaccccagtgccctgggcttctatctgctgagcaac
cccatcccagactggaaagtagacctgcaacctacaccagctttgagagcagaagggttt
gccagtggtcagaccaagcctgtttggtgtgctttggtggaggaggttggtggaaaacag
aatggaaaagtggaaaaacccagtaactttacagtggagaaacctgacaaattccacctc
cgccaggtgatcaaggttaacatcaacagtgataaattgtgtcaaagggcaatgctcagg
gaaggtgaggaaagcaggactcagcacggcaaacaggagtggggcaaaactgccacagca
ggttggaagacagttcaacagatcgaaggcacgaggagacccggaggagccccagccaca
cccacctccccaggaatgccggccccactgaccaagcagaggataggagaggaagagaac
tgtctgtctctcaatggacccccctataacttgcccctcctggaggaagaggaagacaag
cctgagaacagcaccgtcactaaaaacgtgatgattcaaaccacgctggcagctcagatg
tga