GENSCAN 1.0	Date run:  2-Jun-117	Time: 11:47:18

Sequence gi568815581f:56494224_56694919 : 200696 bp : 43.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4695   4875  181  2  1   73   91    78 0.328   5.95
 1.02 Term +  16250  17046  797  0  2   68   50   750 0.251  62.65
 1.03 PlyA +  19622  19627    6                               1.05

 2.03 PlyA -  19771  19766    6                               1.05
 2.02 Term -  38857  38741  117  1  0  -90   42   287 0.911   4.84
 2.01 Init -  43115  42993  123  2  0   70   64   135 0.959   9.47
 2.00 Prom -  74120  74081   40                              -2.46

 3.00 Prom +  90907  90946   40                              -2.76
 3.01 Sngl + 100001 100699  699  1  0   82   42  1198 0.994 108.81
 3.02 PlyA + 105456 105461    6                               1.05

 4.00 Prom + 111567 111606   40                              -4.06
 4.01 Init + 126496 126724  229  0  1   91   69    82 0.695   5.14
 4.02 Intr + 133011 133085   75  1  0   37  115    32 0.489   0.29
 4.03 Intr + 134985 135108  124  1  1  110   97    27 0.814   5.44
 4.04 Intr + 139553 139626   74  2  2   24   93    45 0.493  -2.35
 4.05 Term + 141806 141897   92  0  2   93   48    87 0.638   3.08
 4.06 PlyA + 144034 144039    6                               1.05

 5.04 PlyA - 144067 144062    6                               1.05
 5.03 Term - 154733 154677   57  2  0   99   39    84 0.768   2.29
 5.02 Intr - 169531 169366  166  0  1   72   24    96 0.013   1.56
 5.01 Init - 176100 176021   80  0  2   58   76    59 0.086   2.23
 5.00 Prom - 179069 179030   40                              -1.96

 6.02 PlyA - 179571 179566    6                               1.05
 6.01 Sngl - 180868 180608  261  1  0   42   40   361 0.872  21.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_1|325_aa
MDALQYARYKQPVSGLPITKLIDPSDEQSLKKINSTSSSHIDCLPSPPPSPEMHRRKTVS
DSQPCSDEEACSEVFLPTNSDYDSSDALSPRDLDLVYLSSHDIAQQTLSGLSGSAPDVLQ
VHDVKTPLGPGQDPQGEGPNPDHSCAEFLHSLTLTGFTPKNHAKTVSGGRPPLGFLGKRK
PGKHPHYGGFSRHHRWLRIHSETQSLSLSEGIYTQHLSQACGLAQEPKEAKRAGPALDDP
RGLTLAHAASLPEERNSSLQDARPSVRRLYVEPYAAAVVAQDEKPWASLSPPSGGRITLP
SPTGPDVSQEGPTASPMSEILSSML

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_1|978_bp
atggatgctctacagtatgcaagatacaaacaaccagtttctggcttgcccatcactaag
ctgatagacccctcagatgagcagagcctaaagaagatcaattctacatcatcatcacat
atagactgtcttccatccccacccccatccccagagatgcacagaagaaagacagtgagt
gattcacagccctgctctgatgaagaagcctgctcagaagtcttcctccccaccaacagt
gactacgactccagcgatgccctgagccccagagacctggacctggtctacctatcatct
cacgacattgcgcagcagacccttagcggcctaagcggcagcgcccccgacgtcctgcaa
gtgcacgacgtgaaaacccctctggggccgggccaggatccccagggcgagggcccaaat
cccgatcactcatgtgccgagtttctccatagcctgaccctcacggggttcacacccaag
aaccacgccaagactgtgtccggtgggcggcccccgctaggcttcctgggaaagcggaag
ccaggcaagcacccccactatggcggcttcagccgccatcatcgctggttgcgcatccac
agcgagacccagtcgctatcgctctctgagggcatttatacacagcacctgtcccaggcc
tgtggtctggcccaggagcccaaggaggccaagcgggccggccctgcccttgatgatccc
aggggcctaactctggcccacgctgccagccttcctgaggagcggaacagcagtctccag
gacgcgaggccttccgtccgccgcctctacgtggagccctacgcagcggccgtggtggcc
caggacgaaaaaccatgggcaagcttgagcccgccctctggaggccgcatcaccctgccc
agccccactggccccgatgtgagtcaggagggccccaccgcctctcccatgtcagaaata
ctcagcagcatgctttag

>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_2|79_aa
MVSKGNSGGCYQKTVRMNARKARTTNVHYTSSPSSNNQLLESEANSNYKKKRKKKKEEEE
EEEKNKKKEEEEKEKEKNR

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_2|240_bp
atggtttccaaaggaaattcagggggctgttaccagaagacggtacgaatgaatgctcga
aaggcaagaacaacaaatgtccactacacttcatccccaagttctaacaaccaactactg
gagtctgaagccaacagcaattacaagaagaagaggaagaagaagaaggaagaggaggag
gaggaggagaagaacaagaagaaggaggaggaggagaaggagaaggagaagaatcgttaa

>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_3|232_aa
MERCPSLGVTLYALVVVLGLRATPAGGQHYLHIRPAPSDNLPLVDLIEHPDPIFDPKEKD
LNETLLRSLLGGHYDPGFMATSPPEDRPGGGGGAAGGAEDLAELDQLLRQRPSGAMPSEI
KGLEFSEGLAQGKKQRLSKKLRRKLQMWLWSQTFCPVLYAWNDLGSRFWPRYVKVGSCFS
KRSCSVPEGMVCKPSKSVHLTVLRWRCQRRGGQRCGWIPIQYPIISECKCSC

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_3|699_bp
atggagcgctgccccagcctaggggtcaccctctacgccctggtggtggtcctggggctg
cgggcgacaccggccggcggccagcactatctccacatccgcccggcacccagcgacaac
ctgcccctggtggacctcatcgaacacccagaccctatctttgaccccaaggaaaaggat
ctgaacgagacgctgctgcgctcgctgctcgggggccactacgacccaggcttcatggcc
acctcgccccccgaggaccggcccggcgggggcgggggtgcagctgggggcgcggaggac
ctggcggagctggaccagctgctgcggcagcggccgtcgggggccatgccgagcgagatc
aaagggctagagttctccgagggcttggcccagggcaagaagcagcgcctaagcaagaag
ctgcggaggaagttacagatgtggctgtggtcgcagacattctgccccgtgctgtacgcg
tggaacgacctgggcagccgcttttggccgcgctacgtgaaggtgggcagctgcttcagt
aagcgctcgtgctccgtgcccgagggcatggtgtgcaagccgtccaagtccgtgcacctc
acggtgctgcggtggcgctgtcagcggcgcgggggccagcgctgcggctggattcccatc
cagtaccccatcatttccgagtgcaagtgctcgtgctag

>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_4|197_aa
MALSDPPFWVHMLVQSSPIAKRTDLNSQKDIVEVTACDLQGEIITDIATSTLLSRSLPMG
EACWYDTQVALWRGSCGSYNAYLKALPKRFSEIMQVQLSSTVSKPSPKVLGGQKMGWEAA
IKPDPPLRGVLAIIGLVTEHWGRATDSETLVPCMPEGGDDLGVADGEDNNSTEPNSFNKL
RKLKEHQVTQEVTSFIL

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_4|594_bp
atggctctcagtgatccccccttctgggttcatatgctagtacagtcttctcccatagcg
aagaggacagacctgaatagccaaaaggatattgtggaagtgacagcatgtgacctccaa
ggcgagatcataacagacatcgctacttctaccttgctctctcgatcactccccatgggg
gaagcctgttggtacgacactcaagtagccctatggagaggttcttgtgggagctataat
gcctacctcaaagctttgccaaaaagattcagtgaaataatgcaagtacaattatctagc
acagtttctaaaccttcccctaaagtcctcgggggccagaagatggggtgggaagcagct
ataaaacctgacccacctctcagaggtgtgctggcaattatagggctggtgactgagcac
tggggaagagccacagactccgagacccttgttccatgtatgccagaaggtggagatgac
ttgggtgtggctgatggagaagataacaacagcacagagcccaactccttcaacaaactc
aggaaactaaaagaacaccaggtcacccaagaagtaactagcttcatcctataa

>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_5|100_aa
MERPHVGVVANGSTKILADLQHQLPDLAACGSHLRRQQAVRRTGFGPPVILLGIQSGPSG
PWSSGELDTLGTSQRNERVLAGVFGDGSIQMPAQPFECSL

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_5|303_bp
atggagaggccacatgtgggtgttgtggccaatgggtccactaagatcttagctgacctg
cagcatcaactgcctgaccttgctgcctgtggatcccacctgaggaggcagcaggctgtg
cggaggacaggatttggcccccccgtcattctcctgggcatccagtctggtccatcaggt
ccatggagcagcggggagctggacaccctggggacaagccagagaaatgagagagtcctt
gctggggtgtttggcgatggtagcatccagatgccagcccagccctttgaatgcagcctg
tga

>gi568815581f:56494224_56694919|GENSCAN_predicted_peptide_6|86_aa
MVEREREREGRRGRRRREEEEEEEEEEEEEEEEEENKNENKNKNKKNKNENKNKNRNNKK
RRKLELPVSGQRKSTVFALDAACCTP

>gi568815581f:56494224_56694919|GENSCAN_predicted_CDS_6|261_bp
atggtggagagagagagagagagagaaggaagaagaggaagaagaagaagagaagaagaa
gaggaggaggaggaggaagaagaagaagaagaggaggaggaggagaacaagaatgagaac
aagaacaagaacaagaagaacaagaacgagaacaagaacaagaacaggaacaacaagaag
aggagaaagttagaattgcctgtctctgggcagaggaagagtacagtttttgctcttgat
gcagcctgttgtaccccatga