GENSCAN 1.0	Date run: 24-Oct-119	Time: 21:47:09

Sequence gi568815581f:44457759_44659383 : 201625 bp : 46.44% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  17145  17071   75  0  0   82  103    63 0.681   6.91
 1.01 Init -  45612  45568   45  0  0  104   97   109 0.769  14.08
 1.00 Prom -  51414  51375   40                              -3.76

 2.00 Prom +  56370  56409   40                              -5.56
 2.01 Init +  58423  58477   55  0  1   81  110    16 0.480   4.73
 2.02 Intr +  65403  65485   83  1  2   49   70    73 0.095   0.96
 2.03 Intr +  80042  80096   55  1  1   70   73    58 0.108   1.05
 2.04 Intr +  84460  84543   84  2  0  120   94   -21 0.586   1.49
 2.05 Term +  87997  88106  110  2  2   24   54   142 0.768   3.07
 2.06 PlyA +  88110  88115    6                               1.05

 3.00 Prom +  99348  99387   40                              -5.56
 3.01 Sngl +  99931 101628 1698  0  0   96   55  3536 0.971 344.17
 3.02 PlyA + 101711 101716    6                               1.05

 4.03 PlyA - 102777 102772    6                               1.05
 4.02 Term - 108636 108509  128  1  2  112   41   138 0.815   9.94
 4.01 Init - 112971 112965    7  0  1   36  121     0 0.154  -0.73
 4.00 Prom - 123178 123139   40                              -3.76

 5.00 Prom + 124813 124852   40                              -5.46
 5.01 Init + 138574 138648   75  0  0  110   57    64 0.786   6.59
 5.02 Intr + 142403 142537  135  1  0  121   89   -28 0.597   1.36
 5.03 Intr + 144102 144230  129  2  0   64   25   116 0.532   3.79
 5.04 Intr + 157332 157463  132  2  0   57  115    56 0.230   6.04
 5.05 Term + 171293 171358   66  1  0   57   48    98 0.343   0.64
 5.06 PlyA + 171536 171541    6                               1.05

 6.00 Prom + 181195 181234   40                              -1.66
 6.01 Sngl + 187653 187832  180  2  0   85   53   292 0.909  20.40
 6.02 PlyA + 188634 188639    6                               1.05

 7.00 Prom + 196197 196236   40                              -4.56
 7.01 Init + 198561 198656   96  2  0   71   97   138 0.996  11.31
 7.02 Term + 199369 199512  144  0  0   78   39   165 0.935   8.51
 7.03 PlyA + 201332 201337    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_1|40_aa
MADRFSRFNEDRDFQGNHFDQYEEGHLEIEQASLDKPIES

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_1|120_bp
atggcggaccgcttctcccgcttcaacgaagaccgagactttcagggtaatcactttgat
cagtatgaggaaggacacttggaaattgaacaagcgtcacttgacaagcctatagaatcg

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_2|128_aa
MAGKVLVLIEFMFWLGEPGPGDRKRSNLEQVHWSKPSSVRFRLDPQASWVLGLTDFKNEA
VDLRRFPHWYTAWHPWALTALADSHQSPRLGPGHMNTEKVAIYKPGRKPSPESNHAGIPI
SDFQLPEL

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_2|387_bp
atggcaggaaaggttcttgttctcattgagtttatgttctggctgggggagccaggtcct
ggggaccgaaagaggtccaacttggagcaggtacattggtctaagcctagttctgttcgg
ttccggctcgacccccaagcttcttgggttcttggtctcacagacttcaagaatgaagcc
gtggaccttcgcaggttcccccactggtacactgcctggcatccctgggcactgacagcc
ctggctgactcacatcaaagccccagactgggtccaggccacatgaacactgagaaggtg
gccatctacaagccaggaaggaagccttcgccagaatccaaccatgctggcatcccgatc
tcagactttcagcttccagaactatga

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_3|565_aa
MRPRSALPRLLLPLLLLPAAGPAQFHGEKGISIPDHGFCQPISIPLCTDIAYNQTIMPNL
LGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQG
CEALMNKFGFQWPERLRCEHFPRHGAEQICVGQNHSEDGAPALLTTAPPPGLQPGAGGTP
GGPGGGGAPPRYATLEHPFHCPRVLKVPSYLSYKFLGERDCAAPCEPARPDGSMFFSQEE
TRFARLWILTWSVLCCASTFFTVTTYLVDMQRFRYPERPIIFLSGCYTMVSVAYIAGFVL
QERVVCNERFSEDGYRTVVQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKW
GHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNSLDPLRGFVLAPL
FVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLERLMVRIGVFSVLYTVPATIVIACY
FYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSPDFTVYMIKYLMTLIVGITSGFWIW
SGKTLHSWRKFYTRLTNSRHGETTV

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_3|1698_bp
atgcggccccgcagcgccctgccccgcctgctgctgccgctgctgctgctgcccgccgcc
gggccggcccagttccacggggagaagggcatctccatcccggaccacggcttctgccag
cccatctccatcccgctgtgcacggacatcgcctacaaccagaccatcatgcccaacctt
ctgggccacacgaaccaggaggacgcaggcctagaggtgcaccagttctatccgctggtg
aaggtgcagtgctcgcccgaactgcgcttcttcctgtgctccatgtacgcacccgtgtgc
accgtgctggaacaggccatcccgccgtgccgctctatctgtgagcgcgcgcgccagggc
tgcgaagccctcatgaacaagttcggttttcagtggcccgagcgcctgcgctgcgagcac
ttcccgcgccacggcgccgagcagatctgcgtcggccagaaccactccgaggacggagct
cccgcgctactcaccaccgcgccgccgccgggactgcagccgggtgccgggggcaccccg
ggtggcccgggcggcggcggcgctcccccgcgctacgccacgctggagcaccccttccac
tgcccgcgcgtcctcaaggtgccatcctatctcagctacaagtttctgggcgagcgtgat
tgtgctgcgccctgcgaacctgcgcggcccgatggttccatgttcttctcacaggaggag
acgcgtttcgcgcgcctctggatcctcacctggtcggtgctgtgctgcgcttccaccttc
ttcactgtcaccacgtacttggtagacatgcagcgcttccgctacccagagcggcctatc
atttttctgtcgggctgctacaccatggtgtcggtggcctacatcgcgggcttcgtgctc
caggagcgcgtggtgtgcaacgagcgcttctccgaggacggttaccgcacggtggtgcag
ggcaccaagaaggagggctgcaccatcctcttcatgatgctctacttcttcagcatggcc
agctccatctggtgggtcatcctgtcgctcacctggttcctggcagccggcatgaagtgg
ggccacgaggccatcgaggccaactctcagtacttccacctggccgcctgggccgtgccg
gccgtcaagaccatcaccatcctggccatgggccagatcgacggcgacctgctgagcggc
gtgtgcttcgtaggcctcaacagcctggacccgctgcggggcttcgtgctagcgccgctc
ttcgtgtacctgttcatcggcacgtccttcctcctggccggcttcgtgtcgctcttccgc
atccgcaccatcatgaagcacgacggcaccaagaccgaaaagctggagcggctcatggtg
cgcatcggcgtcttctccgtgctctacacagtgcccgccaccatcgtcatcgcttgctac
ttctacgagcaggccttccgcgagcactgggagcgctcgtgggtgagccagcactgcaag
agcctggccatcccgtgcccggcgcactacacgccgcgcatgtcgcccgacttcacggtc
tacatgatcaaatacctcatgacgctcatcgtgggcatcacgtcgggcttctggatctgg
tcgggcaagacgctgcactcgtggaggaagttctacactcgcctcaccaacagccgacac
ggtgagaccaccgtgtga

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_4|44_aa
MEAQAPMRARSRQRPSPTAKSGREKAVVVAKQGKRMGASCRLRQ

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_4|135_bp
atggaagctcaggcgcccatgcgtgcccgcagcaggcaaaggccaagcccaacagccaag
agtgggcgggagaaagccgtggtggtagccaaacagggcaaacggatgggcgcttcttgc
cggctgcgccaataa

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_5|178_aa
MENVKEKKRKVLAVPEIVEKRNFSEPFPLLLLSGSLGMAPLPGSVTEKGGHAVVGDVPGP
LKPKIGWVNVRYSEEGKREHVDVGNNVLRVNEPVRIEPASAGTRHPCGEYMWGGRNQDCD
APCCFPNTRAKVLTTYRWREEKEREEERKGGERKRRKESQAKPLDVEEEHVSGGTHIG

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_5|537_bp
atggagaatgtcaaagagaagaaaaggaaggttctggctgtgccagaaatcgttgagaaa
aggaatttctcagagccctttcctctcctccttctgtctgggagtctgggaatggctcct
ttacctgggagtgtcacagagaaggggggacatgcggtggttggggatgttcctgggcct
cttaagcccaagatcgggtgggtgaatgtgcggtacagtgaagaggggaaacgggaacac
gtggatgttgggaataacgtgttacgtgtgaatgagccagttcgcattgagcctgcaagc
gcaggcacccggcacccatgtggggagtacatgtggggtggcaggaaccaagactgtgat
gctccctgctgcttccctaacacccgtgcaaaggtgcttactacttaccgatggagggag
gaaaaggagagggaggaagaaagaaaaggaggagagagaaagagaagaaaggaaagccaa
gccaagccgctggatgttgaggaggagcacgtcagcggaggcacacacattggctag

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_6|59_aa
MRQLKGKPRKETWKDKKEQKQAMQEARQQITTVVLPTLAAVVLLIVVFVYAATRPTITK

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_6|180_bp
atgaggcagctcaaagggaagcccaggaaggagacatggaaggacaagaaggagcagaag
caagccatgcaggaggcccggcagcagatcaccacggtggtgctgcccacgctggccgcg
gtcgtgctgctgattgtggtgtttgtgtatgcagccacacgccccaccatcaccaagtga

>gi568815581f:44457759_44659383|GENSCAN_predicted_peptide_7|79_aa
MAGCETGGAGLTAGRGAPVPCRVPSREPQAGQPKVAFPGGANRCWNLGADAGSRLTDVFG
SVMLTGSASFYDCYTSQVL

>gi568815581f:44457759_44659383|GENSCAN_predicted_CDS_7|240_bp
atggcgggctgcgaaacgggaggggcgggcctcacagcggggcggggcgcgcctgtgccg
tgtcgcgtgccgagccgcgagccccaggcaggccagcccaaagtcgcgttccccggaggt
gcgaatcgctgttggaacctcggcgccgacgccggcagcaggttaaccgacgtcttcggc
agcgtgatgttgactggctccgcttccttctacgattgctacacatcgcaggtcctttag