GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:53:58

Sequence gi568815581f:32344524_32580628 : 236105 bp : 43.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7253   7389  137  0  2   61  110     7 0.153   0.49
 1.02 Intr +  13980  14118  139  2  1   45   94   140 0.984  10.34
 1.03 Intr +  16075  16242  168  2  0   57   69   111 0.924   6.02
 1.04 Intr +  20807  20964  158  0  2  122  110    41 0.996   9.43
 1.05 Intr +  23249  23456  208  1  1   52  100   112 0.612   7.45
 1.06 Intr +  28279  28390  112  2  1   48   96    94 0.454   5.64
 1.07 Term +  44113  44137   25  1  1  106   47    35 0.338  -1.10
 1.08 PlyA +  48430  48435    6                               1.05

 2.00 Prom +  64309  64348   40                              -2.36
 2.01 Init +  84464  84599  136  1  1   73   38   156 0.509   9.40
 2.02 Intr + 102422 102523  102  0  0   52  111    95 0.993   8.35
 2.03 Intr + 109972 110096  125  2  2   95  107    73 0.998  10.20
 2.04 Intr + 119526 119597   72  2  0  113   92    17 0.938   4.20
 2.05 Intr + 119998 120055   58  0  1  129  106    36 0.995   7.96
 2.06 Intr + 124476 124670  195  1  0   92   59   253 0.911  22.19
 2.07 Intr + 129278 129422  145  0  1   78   63   228 0.986  18.64
 2.08 Intr + 130241 130301   61  2  1   84   91    28 0.516   1.44
 2.09 Intr + 132998 133060   63  1  0   85  113     2 0.711   1.31
 2.10 Intr + 134728 134853  126  0  0   78   94   114 0.999  11.88
 2.11 Intr + 135623 135674   52  1  1   58  115    28 0.996   0.98
 2.12 Term + 135966 136108  143  1  2  105   43   165 0.998  11.79
 2.13 PlyA + 136477 136482    6                               1.05

 3.00 Prom + 138830 138869   40                              -9.55
 3.01 Init + 139642 139823  182  0  2   89  100    92 0.087   9.22
 3.02 Intr + 142460 142639  180  2  0   38  102   112 0.053   6.58
 3.03 Intr + 142953 143021   69  0  0   73   97    28 0.033   0.50
 3.04 Term + 143127 144021  895  0  1   75   53  1528 0.036 139.88
 3.05 PlyA + 146146 146151    6                               1.05

 4.02 PlyA - 146177 146172    6                               1.05
 4.01 Sngl - 150625 150236  390  1  0   40   48   367 0.512  22.12
 4.00 Prom - 151174 151135   40                              -6.16

 5.00 Prom + 154378 154417   40                              -7.76
 5.01 Init + 155620 155666   47  0  2   47   68    21 0.182  -3.66
 5.02 Intr + 156848 157139  292  2  1   44   38   163 0.514   4.04
 5.03 Intr + 157460 157508   49  1  1   81   82    77 0.573   4.65
 5.04 Intr + 158435 158580  146  0  2  109   86   -40 0.439  -2.10
 5.05 Intr + 159310 159441  132  0  0   87  100    16 0.728   3.54
 5.06 Intr + 174267 174422  156  2  0   58   53   172 0.648  10.91
 5.07 Intr + 174562 174675  114  0  0   12   94    66 0.448   0.24
 5.08 Term + 174809 175252  444  1  0   45   48   247 0.825  11.64
 5.09 PlyA + 176292 176297    6                               1.05

 6.00 Prom + 187054 187093   40                              -1.76
 6.01 Init + 194225 194357  133  1  1   78   41   100 0.745   4.60
 6.02 Term + 201780 201892  113  1  2   78   41    95 0.461   2.52
 6.03 PlyA + 202921 202926    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 142601 142479  123  2  0   71   50   330 0.900  18.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_1|315_aa
XLIRYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIP
GRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQ
PVQPQQGYIPPMAQPGLPPVPGAPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAP
TATVPAPQPPVTKPLFPSAGQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTA
STTSTTNSTAAKPAASITSKPATLTTTSATIVDEVESKWMPTALTEDNFWDLIIQAGIVI
VIIKEAVRLQLTMGN

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_1|948_bp
ntattgatcaggtattgtaatagagattttgatgatgagaagatccttattcagcaccaa
aaagcaaagcattttaaatgccatatatgtcacaagaaattgtatacaggacctggctta
gctattcattgcatgcaggtacataaagaaacaatagatgccgtaccaaatgcaatacct
ggaagaacagacatagagttggaaatatatggtatggaaggtattccagaaaaagacatg
gatgaaagacgacgacttcttgaacagaaaacacaagaaagtcaaaaaaagaagcaacaa
gatgattctgatgaatatgatgatgacgactctgcagcctcaacttcatttcagccacag
cctgttcaacctcagcaaggttatattcctccaatggcacagccaggactgccaccagta
ccaggagcaccaggaatgcctccaggtatgcccccacctgttccacgtcctggaattcct
ccaatgactcaagcacaggctgtttcagcgccaggtattcttaatagaccacctgcacca
acagcaactgtacctgccccacagcctccagttactaagcctcttttccccagtgctgga
caggctcaggcagctgtccaaggacctgttggtacagatttcaaacccttaaatagtacc
cctgcaacaactacagaacccccaaagcctacattccctgcttatacacagtctacagct
tcaacaactagtacaacaaatagtactgcagctaaaccagcggcttcaataacaagtaag
cctgctacacttacaacaactagtgcaaccatagtagatgaagttgagtcaaagtggatg
ccaactgccctcacagaagacaacttttgggacttgataattcaggcaggcattgtgatt
gtcataattaaggaagctgtaagactgcagctgaccatgggtaactga

>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_2|425_aa
MRESLELPRDLLNGCDQNADSDMDNDVQAKVVSDADEELTGNWSEVKRDIQENDEEAVQV
KEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQ
EVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKAL
LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDW
KTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTE
ALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRV
QADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNK
AKKLT

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_2|1278_bp
atgagggaaagtttggaacttcctagagacttactgaatggttgtgaccaaaatgctgat
agtgatatggacaatgatgtccaggccaaggtggtctcagatgcagatgaggaacttact
ggaaactggagtgaagtgaagcgtgacattcaggaaaacgatgaagaggcagtgcaagtc
aaagagcagagcatcctggaactgggatctctcctggcaaagactggacaagctgcagag
cttggaggactcctgaagtatgtacgacccttcttgaattccatcagcaaggctaaagca
gctcgcctggtccgatctcttcttgatctgtttcttgatatggaagcagctacagggcag
gaggtcgagctgtgtttagagtgcatcgaatgggccaagtcagagaaaagaactttctta
cgccaagctttggaggcaagactggtgtctttgtactttgataccaagaggtaccaggaa
gcattgcatttgggttctcagctgctgcgggagttgaaaaagatggacgacaaagctctt
ttggtggaagtacagcttttagaaagcaaaacataccatgccctgagcaacctgccgaaa
gcccgagctgccttaacttctgctcgaaccacagcaaatgccatctactgcccccctaaa
ttgcaggccaccttggacatgcagtcgggtattatccatgcagcagaagagaaggactgg
aaaactgcgtactcatacttctatgaggcatttgagggttatgactccatcgacagcccc
aaggccatcacatctctgaagtacatgttgctgtgcaaaatcatgctcaacaccccagaa
gatgtccaggctttggtgagcgggaagcttgcacttcggtatgcagggaggcagacagaa
gcattaaaatgcgtggctcaggctagcaagaacagatcactggcagattttgaaaaggct
ctgacagattaccgggcagagctccgggatgacccaatcatcagcacacacttggccaag
ttgtatgataacttactagaacagaatctgatccgagtcattgagcctttttccagagta
caggccgacgtggaaaggaaattatcacagatgattcttgacaagaaatttcatgggatt
ttggaccagggggagggtgtcctgattattttcgatgaacccccagtagataaaacttac
gaagctgctctggaaacaattcagaacatgagcaaagtagtggattccctctacaacaaa
gccaagaaactgacatag

>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_3|441_aa
MAWVIGAPGDPSLSRSSKWAASAIPFLLCCNCDFALGKCEEAGVLPRALFEGARERLAGQ
RTLDRSSLAAAAAAAAVAAAEREPSRSPPSAPERRRAPGPRRRGRGAHCGGRGAQELPPA
GQIQGGSTLPGSAPASSPGPPQARYRKATLFEDGAATVGHYTAVQNSKNAKDKNLKRHSI
ISVLPWKRIVAVSAKKKNSKKVQPNSSYQNNITHLNNENLKKSLSCANLSTFAQPPPAQP
PAPPASQLSGSQTGGSSSVKKAPHPAVTSAGTPKRVIVQASTSELLRCLGEFLCRRCYRL
KHLSPTDPVLWLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSEVGSDHELQAVL
LTCLYLSYSYMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVF
SDLKNESGQEDKKRLLLGLDR

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_3|1326_bp
atggcctgggtgataggagctcctggagacccctcccttagtcgcagcagcaagtgggct
gccagtgccatcccattcctgctgtgctgcaactgtgactttgccttgggcaagtgtgag
gaggctggtgttctgccgagagctctgtttgaaggtgctagggaaaggctggctggacaa
agaaccttggacagaagctccctagctgccgccgccgccgccgccgccgtcgccgccgcc
gagcgcgagcccagccgatccccgccgagcgcccccgagcgccgccgagcgccgggaccg
cggcggcggggccgcggcgcgcattgcggagggcgcggagcgcaggagctgccgcctgcc
gggcagatccaagggggcagcacgcttcccgggagcgcccccgcctcctctccggggccg
ccgcaggctcgctaccggaaggccacgctgtttgaggatggcgcggccaccgtgggccac
tatacggccgtacagaacagcaagaacgccaaggacaagaacctgaagcgccactccatc
atctccgtgctgccttggaagagaatcgtggccgtgtcggccaagaagaagaactccaag
aaggtgcagcccaacagcagctaccagaacaacatcacgcacctcaacaatgagaacctg
aagaagtcgctgtcgtgcgccaacctgtccacattcgcccagcccccaccggcccagccg
cctgcacccccggccagccagctctcgggttcccagaccgggggctcctcctcagtcaag
aaagcccctcaccctgccgtcacctccgcagggacgcccaaacgggtcatcgtccaggcg
tccaccagtgagctgcttcgctgcctgggtgagtttctctgccgccggtgctaccgcctg
aagcacctgtcccccacggaccccgtgctctggctgcgcagcgtggaccgctcgctgctt
ctgcagggctggcaggaccagggcttcatcacgccggccaacgtggtcttcctctacatg
ctctgcagggatgttatctcctccgaggtgggctcggatcacgagctccaggccgtcctg
ctgacatgcctgtacctctcctactcctacatgggcaacgagatctcctacccgctcaag
cccttcctggtggagagctgcaaggaggccttttgggaccgttgcctctctgtcatcaac
ctcatgagctcaaagatgctgcagataaatgccgacccacactacttcacacaggtcttc
tccgacctgaagaacgagagcggccaggaggacaagaagcggctcctcctaggcctggat
cggtga

>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_4|129_aa
MRWHGSQGPCHGAEAVVGGPASATLALPRPLWGPSGILLALVEEAGCAGANGGRELPGRC
PVLMLPANCPSGVFGSCSEKRHLQVNVTNPVQCSLHGKKCTVSVETRLNQPQPDFTKNRS
GFILSVPGN

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_4|390_bp
atgcgctggcatgggagccaagggccctgccatggtgccgaggctgtggttggaggccca
gctagtgccacactcgccttgcctcggcctctctggggcccttcaggcatcctcctggca
cttgtggaggaagcaggctgcgccggagccaatggtggccgggagctgccgggcaggtgc
cctgttctcatgctgcctgctaactgcccgtctggtgtttttggttcctgcagtgagaag
cgccaccttcaagtgaacgtcaccaacccagtacagtgcagcctgcacgggaagaagtgc
accgtctccgtggagacgcggctcaaccagccccagcccgacttcaccaagaatcgctcg
ggcttcatcctcagcgtgcccgggaactga

>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_5|459_aa
MGNTGWATGSGRAGAAQFSNLIVSPNTLIPEGVLPNTLEEGMLHREARKDLNGQALVGLD
QSLFGQSHFDTVVHASIMDSQWSLHKKLKKDGFGASGELDTWRLTGRRRRIQHVDDVGIE
SEDTQLVTTGFNGQQTVEFGDFHLVSSVSSHHCRQMAFIKLLSFIFHLDSCLLLLEKPFL
QEVNPPADVKPHRESLSKSCFRKCHFCLCQGRMDTFTTVTYKVTVNANSSTFCSQNPLPP
NNDFNSQRSWKFCFRPRNAIELQNSAADRFSAAREGEEVRGESLGSLKGAAVMSPSSAMR
GTGRLEASEAAQRERSAGRAAAGESGATKERREGEDAGKQGGGEAEETKGICTRRVGSGG
GGGGGGCGFERDAVAKATPAPAPAAETKPLPEPERQRTRPPCSPPQPRPAALLRLAADSP
SQPACPPSFRLFLFVCLSREGDDLGLRSSAGILMSSLRC

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_5|1380_bp
atgggcaacactggctgggccacaggttctggacgtgctggggccgctcagttctctaat
ctgattgtgagccctaacaccctcattcccgagggggtcctgcccaacaccttggaggaa
ggaatgctgcacagagaggccaggaaagatctgaatggacaggccttggtgggtttagat
cagtccctttttggccaatctcatttcgacacagttgtccatgcttcaatcatggacagc
caatggagtctccataaaaaactcaagaaggatgggtttggagcttctggagagctggac
acatggaggctgacgggaaggcggagaagaatccagcacgtagatgatgtcggaattgaa
tcggaggacacccagctggtgaccactggatttaatggccagcaaactgtggaattcggg
gactttcatctcgtttcatctgtttcaagccatcattgcaggcaaatggcctttatcaaa
ttactttccttcatttttcatttagactcttgtcttctgctcttagagaaacccttcctt
caagaagtaaatccccctgctgatgtcaaaccacacagggaatctctttcaaaatcttgc
tttaggaaatgccacttctgtttatgtcagggtcgaatggacacttttaccacagtcacc
tataaggtgaccgtgaatgctaacagcagcacattttgctcacagaatcccctccccccg
aataacgacttcaactctcagaggtcctggaaattctgctttcggcctcgcaatgccatc
gagctgcagaactcggcggccgacaggttctctgcggcccgggaaggggaagaggtccgt
ggggaatctcttgggtccttaaagggggcggctgtcatgtctcctagctctgctatgcgc
ggtacaggccggctagaggccagcgaggccgcccagcgggagcggagcgcaggaagggcg
gctgccggggaatccggggcgacaaaggaaaggcgggagggggaggacgcagggaagcag
ggaggaggggaggcggaggagacaaagggaatctgcacccgccgggtgggctctggcggc
ggcggcgggggcggaggctgcggcttcgagcgcgacgcggtcgccaaggcaacgccggcc
ccagcgcccgcggctgaaacgaagccgctgcccgagcccgagcgccagcgcacacgccct
ccttgcagccccccgcagccccggccggccgcgcttctccgcctcgccgccgacagcccc
tcccagcccgcctgcccgccctccttccggctgtttttgtttgtctgtctttcccgagaa
ggtgatgatttggggcttagatcatctgctggcatattgatgagctcactgcgttgctga

>gi568815581f:32344524_32580628|GENSCAN_predicted_peptide_6|81_aa
MEYYAAVKTNEIMSFAGTWVELEAIILSKLTQEQKTKHRMFLLIRSHSDADAIAMETIPL
RGALSVFVEEHSSSIITVTPK

>gi568815581f:32344524_32580628|GENSCAN_predicted_CDS_6|246_bp
atggaatactatgcagccgtaaaaacgaatgagatcatgtcctttgcaggaacatgggtg
gagctggaagccataatcctcagcaaactaacacaggaacagaaaaccaaacaccgcatg
ttcttgctcataagaagtcattcagatgctgatgctattgccatggaaaccatccctctg
cgaggagctctgtctgtctttgtcgaggagcactccagctccataattactgtcaccccc
aaataa