GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:35:31

Sequence gi568815581f:30871074_31099188 : 228115 bp : 44.29% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5301   5477  177  1  0   57  116    25 0.292   2.09
 1.02 Intr +   8350   8414   65  2  2   66  119    41 0.330   3.44
 1.03 Term +  22221  23081  861  2  0   67   41   161 0.063   2.03
 1.04 PlyA +  23113  23118    6                               1.05

 2.05 PlyA -  23663  23658    6                               1.05
 2.04 Term -  28533  28096  438  0  0   49   39   224 0.262   8.88
 2.03 Intr -  33364  32993  372  1  0  -12   71   178 0.124   1.36
 2.02 Intr -  35547  35402  146  1  2   89   62    92 0.775   6.70
 2.01 Init -  39099  39051   49  0  1   86   58    20 0.750  -2.09
 2.00 Prom -  39735  39696   40                              -3.76

 3.00 Prom +  50501  50540   40                              -4.66
 3.01 Init +  50942  51035   94  1  1   95  110   226 0.999  26.04
 3.02 Intr +  51867  51997  131  1  2  119   60   138 0.980  14.51
 3.03 Intr +  55754  55845   92  1  2   76   76   117 0.503   8.09
 3.04 Intr +  60816  60895   80  0  2   93  103    39 0.631   5.09
 3.05 Intr +  63112  63224  113  2  2   64  110    79 0.948   7.80
 3.06 Intr +  73834  73980  147  0  0  136  100   134 0.995  19.83
 3.07 Intr +  78214  78297   84  0  0   99   83    43 0.876   4.92
 3.08 Intr +  82215  82277   63  2  0   95   77    37 0.717   2.21
 3.09 Intr +  83130  83193   64  2  1   91   40    37 0.469  -2.51
 3.10 Intr +  83361  83482  122  1  2   58   99   103 0.677   8.61
 3.11 Intr +  85168  85396  229  0  1  139   46   288 0.757  27.14
 3.12 Term +  86712  87013  302  1  2  120   47    85 0.495   2.98
 3.13 PlyA +  88096  88101    6                               1.05

 4.00 Prom +  90115  90154   40                              -4.26
 4.01 Init + 100001 100372  372  1  0   91   53   405 0.919  32.26
 4.02 Intr + 113505 113687  183  2  0   22  102   218 0.504  16.58
 4.03 Intr + 116871 117033  163  2  1   30   84   122 0.538   5.55
 4.04 Intr + 127589 127699  111  0  0   94   31    61 0.324   1.35
 4.05 Intr + 137350 137730  381  2  0   12   94   278 0.054  15.68
 4.06 Intr + 145822 145930  109  2  1   83   45    74 0.100   1.94
 4.07 Intr + 150837 150969  133  0  1  100   62    89 0.434   8.15
 4.08 Term + 163488 163670  183  2  0   87   32   113 0.448   3.14
 4.09 PlyA + 164556 164561    6                               1.05

 5.07 PlyA - 168290 168285    6                               1.05
 5.06 Term - 176591 176088  504  2  0   82   48   242 0.941  14.04
 5.05 Intr - 177323 176746  578  0  2   86   54   181 0.231   6.94
 5.04 Intr - 178915 177572 1344  2  0   53   39   598 0.302  39.63
 5.03 Intr - 179687 179477  211  2  1  109  106   172 0.958  19.59
 5.02 Intr - 181739 181646   94  1  1   60   97    18 0.097  -0.13
 5.01 Init - 206325 206228   98  0  2  103   89    59 0.249   7.28
 5.00 Prom - 209792 209753   40                              -3.86

 6.00 Prom + 220447 220486   40                              -4.96
 6.01 Init + 224237 224296   60  1  0   95   91   127 0.349  14.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_1|367_aa
XKISSPKKVVTSPRKVPPPSPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNKD
PTFSLMFDGCFEEIKFSTPSLHKITMKEEWHKFIQLLTEFQMRNVDFLYSNLEFILPLPV
DTIPETKNFCGPSVTVDASAATKSMNCLARKHSEREQPLKKSQKKKQKKTLVILDDSDLF
DTDLDFPDQSISLSSVSSSSNAEESKTGDEESKARDKGNNPETKKSIPCPPKTTAGKKCS
ALVSHCLNSLSEFMDNMSFLDALLTDVREQNKYGRNDFSWTNGKVTSGLCDEFSLESNDG
WTSQSSGELKAAAEALSFTKCSSAISKALETLNSCKKLGRDPTNDLTFYVSQKRNNVYFS
QSAANLE

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_1|1104_bp
naaaaaataagctcccctaagaaagttgttacatcaccaagaaaagttcctccaccatca
ccaaaaagtagtggaccaaagcgagcacttcctcccaaaaccttggcaaattattttaaa
gtatctcccaaacctaaaaataatgaagaaataggaatgcttctggaaaataataaagac
ccaacatttagtttaatgtttgatggctgctttgaagaaatcaagttcagtactccttcc
ctgcacaaaatcacaatgaaggaagaatggcataaattcatccagcttcttacagaattc
caaatgcggaatgtagattttttatatagtaatcttgagtttattctaccattaccagtt
gataccattccagaaactaaaaacttttgtggcccatcagtaactgtggatgccagtgca
gcaacaaaaagtatgaattgtcttgctaggaaacactctgaaagagaacagccattgaaa
aagtcccagaaaaagaaacaaaagaaaacattggtaatattagatgatagtgatctattt
gacactgacttggactttcctgatcaatctattagcctgtcctctgtatcatcttcctca
aatgcagaagaaagcaaaaccggagacgaagaaagcaaagccagagacaaaggaaacaat
ccagagacaaagaaatctattccttgtcctcctaaaacaactgcaggaaaaaaatgttct
gcccttgtttctcattgtttaaattctctctctgagttcatggataacatgtccttctta
gatgcacttttaactgatgtaagggaacaaaacaaatacggtagaaatgactttagttgg
acaaatggaaaggttacaagtggactttgtgatgagtttagtcttgagagtaatgatgga
tggacttctcaaagctctggagaattaaaggcagctgcagaagctctcagctttactaaa
tgttcttctgctatttcaaaagcattggaaaccttgaattcttgcaagaaattaggaaga
gatccaaccaacgatcttactttttatgtttcacaaaagcgcaataatgtatactttagt
cagtcagcagctaatttagagtaa

>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_2|334_aa
MGFHHVGQAGLELLTSGWAPTGAPQSKCLGETQGVSTKEALYPLQTKTGLGIAFLEIRPS
GSQESKITPNVTFCDENAKEPENALDKLFSSEQQASILHVLNTASTKELEAFRLLRGRRS
INIVEHRENFGPFQNLESLMNVPLFKYKSTVQVCNSILCPKTGREKRKSPENRFLRKLLK
PDIERERLKISSIISKMPKADFYVLEKTGLSIQNSSLFPILLHFHIMEAMLYALLNKTFA
QDGQHQVLSMNRNAVGKHFELMIGDSRTSGKELVKQFLFDSILKADPRVFFPSDKIVHYR
QMFLSTELQRVEELYDSLLQAIAFYELAVFDSQP

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_2|1005_bp
atggggtttcaccatgttggccaagctggtctcgaacttctgacctcaggctgggcccca
acaggagctcctcaatctaagtgtctaggagaaacccagggagtctccacgaaggaggca
ctttacccactacagactaaaactggcctcggaatcgccttcctggagattcggcccagc
ggctctcaggagtcgaaaattactcccaatgttactttttgtgatgaaaatgcaaaggag
cccgaaaatgcacttgacaagctcttctcttcagaacagcaggcttccatcttgcatgtg
ttgaatacagcatctactaaagaacttgaagctttccgattgcttcgtggaagaaggtcc
atcaatatcgtagagcacagagaaaactttgggccatttcagaatttagagagtttaatg
aatgtgcccttgtttaagtataaaagtacagttcaagtttgtaactccatactttgtcca
aagactggacgggaaaaaagaaagtcaccggaaaaccggttcctgagaaagctcctcaaa
ccagacatagaaagagaaagacttaagatttcctcgatcatttcaaagatgcctaaagca
gatttctatgttctggaaaaaacaggactttccattcagaactcatctctgtttccaata
ctgttacattttcatatcatggaagccatgctgtatgccttattaaataaaacttttgcc
caggatgggcagcatcaggtgctgagcatgaatcgaaatgcagtggggaagcattttgaa
ctgatgattggtgactcccggactagtggaaaagagctagtgaagcagtttctcttcgat
tctatactgaaggcggatcctcgggtgttcttcccatcagataaaatagttcactacaga
cagatgtttttatctactgaactacaaagagtagaagagctttatgattcattattacaa
gctattgccttctatgaattagcagtgtttgactctcagccttag

>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_3|506_aa
MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR
VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR
EFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISI
KDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAF
PELPESELVPFLTRNYLKQGFMEKTGPKPEKEEGASSKLRQQGEAGKGYETDLVICGKKF
PLLQQKEPFKKRWFALDCHERRLLYYKNPLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGN
RWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGVLSSPLTPLNRLRQHWHGHLPQPSSF
PLQLHQQRVAAAAGDPLTEELAATEHLELLVGRSLHLGPGCPPSVPRSQQPFLAVNSART
EAVALSISSLGLPRNPPRGSEDLVHR

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_3|1521_bp
atgggcgatcgcgagcgcaacaagaagcggctgctggagctgctgcgggcgccggacaca
ggcaacgcgcactgcgccgactgcggggcggcagatcccgactgggcctcttacaagctg
gggatcttcatctgtctcaactgctgcggcgtccaccgtaacttccctgacatcagcaga
gttaaatctgtgcgacttgacttctgggacgacagtattgtggagtttatgatccacaat
ggaaacctccgtgtgaaggccaagttcgaagccagagtcccagctttctactacatcccc
caggccaacgactgcctggtcttaaaggaacaatggattcgagctaagtatgagagacgg
gaatttatggctgatggggaaaccatctcgctcccaggtaaccgagaaggattcctgtgg
aagcgaggaagggacaactcacagtttctgagaaggaagtttgtacttctggcaagagaa
ggcctcctgaagtacttcacaaaggaacagggtaaaagccccaaagctgtcatcagcatt
aaggacttgaatgccaccttccagacagagaagatagggcacccccatgggctgcagatc
acctacaggagagatggccacaccaggaacctgtttgtgtatcatgaaagtgggaaggag
atagtggactggttcaatgccctccgtgcagcccgtctgcagtacctaaaaatggccttt
cctgaactcccagagtctgagctcgtgccattcctcaccaggaactacctcaaacaaggc
ttcatggaaaagactgggccaaagcctgaaaaagaggaaggtgcctcttccaagttgagg
cagcagggtgaagctggcaaagggtatgaaactgacctggtcatctgtggtaagaagttc
cctcttttgcagcagaaagaacctttcaagaaaaggtggttcgccctggattgccatgag
cggaggctgctctattacaagaacccactggatgccttcgagcagggccaggtttttctt
gggaacaaggagcagggatatgaagcctacgaagacctgcccaagggcatccgaggaaat
cgctggaaagccggactcaccattgtcaccccagagcggagatttgtcctcacttgcccc
agtgagaaggaacagcaggaatggctggaaagtttgcggggtgtcctgtccagccccttg
acgcccctcaaccggcttagacagcattggcatggccacctccctcagccctcttcattt
cccttgcagctgcatcaacagagagtggccgcagcagcaggtgacccattaactgaggaa
ctggctgccactgaacacctggaactccttgtgggaagaagtttgcacctcggccctggc
tgcccaccatcagtgccccgcagtcagcagccattcctggcagtgaactctgccaggact
gaagctgtggctttatccatcagctccctgggccttccccgcaacccacctcggggatct
gaggatctggtgcatagatga

>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_4|544_aa
MAGLGLGSAVPVWLAEDDLGCIICQGLLDWPATLPCGHSFCRHCLEALWGARDARRWACP
TCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQAGSDPAHCPCPGSSSLSSAAARPRRRP
ELQRFYRTQDLNFAILKVAVEKSITEVAQELTELVEHLVDIVRSLQNQRPLSESGPDNEL
SILGKAFSSGVDLSMASPKLVTSDTAAGKIRDILHDLEEIQEKLQESVTWKEAPEAQMQG
AIHPTFNLKSLSCSLEVSKDSRTVTVSHRPQPYRWSSDQRRRLLGLAQTRGGKGRRGRED
AAEARAAGCRLVVQPRPRKEKWEERGARRPASSAAQDDYARHVRDPPAVAVAAPKARASA
PDAVVTPPRLAVAPVPVLPAASAAGDMSNPGSRRNGPVKLHLTGLPDPFAKVVVDGSGQC
HSIDTVKNMLDPKWNQHYDLYIEKSDSVTISVWNHKKIHKKQGAGFLRCVHLFPVPSTTS
KTLVCNKLAVYLDLYLIFLLLRFSLRIRFFLHLALMVQVSKKMALRPRVNNKIFKTWLQA
IQMP

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_4|1635_bp
atggcgggcctgggcctgggctccgccgttcccgtgtggctggccgaggacgacctcggc
tgcatcatctgccaggggctgctggactggcccgccacgctgccctgcggccacagcttc
tgccgccactgcctggaggccctgtggggcgcccgcgacgcccgccgctgggcctgcccc
acttgccgccagggcgccgcgcagcagccgcacctgcggaagaacacgctactgcaggac
ctggccgacaagtaccgccgcgccgcacgcgagatacaggcgggctccgaccctgcccac
tgcccctgcccgggctccagttccctctccagcgcggccgcgaggccccggcgccgcccg
gaactgcagcggttttatagaacccaggacctgaactttgctattttgaaggtggcagta
gagaagagcatcacagaagttgctcaggagctgacagagctggtggaacatcttgtagac
attgtcagaagcctgcagaatcagaggcccctatcagaatctggaccagacaacgaactg
agcatcctgggcaaggctttttcttctggggtggatctttccatggcttctccaaagctg
gtgacttccgacacagctgcagggaaaatcagagatattctccatgacctagaagaaatt
caggaaaaattacaagaaagcgtcacctggaaagaggctcctgaagcacaaatgcagggg
gccatccatccaacctttaacttgaagagcctttcctgcagcctggaggtgtccaaggat
tcccgtacagtgactgtgtctcaccgcccacaaccctatcgctggagctccgaccagcgc
cgtcgactactgggcctagcccagacgagaggagggaaaggccgcagaggccgcgaggat
gctgcggaggcgcgggcggccggctgccgcctagttgtgcagcccagaccaaggaaagag
aagtgggaggagcggggagctcggcgtcccgcgtcctccgcggctcaggacgactacgct
cggcacgtccgggaccctccggccgtggcggttgcagcgccaaaagctcgggcctcagcc
cctgacgctgtggtgactccgccgcgcctcgccgtcgcccctgtccccgtcctgcccgcc
gcctccgccgctggggacatgtccaaccccggaagccggaggaacgggcccgtcaagctg
cacctgacaggacttcctgatccatttgctaaggtggtggttgatggatctgggcaatgc
cattctatagatactgtgaagaatatgctcgatccaaagtggaatcagcattatgacctg
tatattgaaaagtctgattcagttacaatcagtgtatggaatcacaagaagatccataag
aaacaaggtgctggatttctccgttgtgttcatctttttccagtgccatcaaccacctca
aagacactggtttgcaacaagctagcggtttacttggacctctacctcatctttcttctt
ttgcgcttcagcctgcgcattcgcttcttcctccacttggctctcatggtgcaggtttcc
aagaaaatggcgctaaggccgagagttaataataaaatatttaaaacatggctccaggcc
atccagatgccttaa

>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_5|942_aa
MPAFYLLLLKAMGFGVTGLDLNPDLPDDVGHLNSYKVSQPTPLTPCQSLSFIEGVFKSKP
GSYPVSALPQESNENLVPFLDTDSGGELPLGPEQFLAAHQDLNDKRTPQERLPEVVPLLD
RDQNQTLVQLPRLKIKPADVEVTMTSEPKNETESSQAQQEAPIQPPEEVAPSATQQEAPT
EPPGPPMEPELSPSEQEQPAQPSESSGEVESSPAQHETPAQPPEEMEPSAFQEEAPTEPP
RPPIEPELSPSEQEQLAQPSESSGEVESSPTQQETPAQPPEHHEVPVSPSGYHETQHSDF
PNVSVKPPDVQLTIATEPSAEVETSPVHQEATAQLSGPGNVEPPAIQHGCPPLPPESSEE
AGHLQIQQETSVQSPEPINKENTTPTQQEAAAEHPQTAEEGESSPIQQEAPAQPLMSPEQ
FQHLKDQQDIIIQQLNRPENYEPPPVHKEPTTQPPTQLSSDFVSSMDDEAIGSPPDVSYL
DLDRELTKPTAVTMWVEPSPVQQDNPSIPTEQADFSLTQPDLPSPPLHSPEKIESPVHQE
ATAQTPDPPKEAEPSPVQQEFPAEPPEPPKEVEPSATQQEASGFPQEVEPSVTQQEVPAQ
IPEPPVEAEPSLTQQEATVQAAESPREVESSRQQMVPVQLPEPPKEVAAQPPAHYEVTVP
TLGQDPAQNSTLPSVTVQPLDLGLTIIPESTTEVELSPTMQETPTQPPKKALQQLVLYQE
VKIPTPGQDQAQHPMSPSITVQPLDLGLTITPEPTMEVEHSTPLKRTIVPPKHLKNTLRC
SPSDKGQAQLSHLTEATVQPLDLELSITTEPTTEVKPSPTTEETSAQPLDPGLAITPEPT
TEIGHSTALEKTRAPHPDQVQTLHRSLTEVTGPPTKLESSQDSLVQSETAPEEQKASTGT
NICELCTCGDETLSCVGLSPKQRLRQVPVPEPYTYNGIFTTL

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_5|2829_bp
atgccagccttttaccttttattgcttaaggccatgggctttggtgttacaggtttggat
ttgaatccagacctaccagatgatgttgggcacctcaactcctacaaagtatcacagccc
acccccctcaccccctgccaaagcctttccttcatagaaggtgtcttcaaatccaagcca
ggctcttatccggtgtcagccctgccccaggaatcaaatgaaaatttggttccattcctg
gatacggattcaggtggagagctgcccctggggccagagcagttcttggctgcacatcag
gatttaaatgacaagcggactccacaagaaaggctcccagaggtggttccactgctggac
agggatcagaaccagaccctagttcagcttcctcgcctcaaaatcaaacctgcagatgtg
gaagttaccatgacttcagagcccaaaaatgagacagaatcttcccaagcccagcaggag
gccccaattcagcctccagaggaggtggcaccttctgcaacccaacaggaggccccaact
gagcctccaggtcctcctatggagcctgaactttcccccagtgaacaggagcagccagct
cagccttctgagtcttctggagaggttgaatcttctccagcccagcacgagaccccagct
cagcctccagaagagatggaaccatctgcattccaagaggaggccccaactgagcctcca
cgtcctcctatagagcctgaactttcccccagtgagcaggagcagctagctcagccttct
gagtcttctggggaggttgaatcttctccaacccagcaggagaccccagctcagccccca
gaacatcatgaagtcccagtttcaccttcaggttaccatgaaactcagcattcagatttt
cccaatgtctctgttaagcctccagacgtgcagctcactatagcaacagagcctagtgca
gaggtggaaacttctccagtccaccaggaggctacagctcagctctcaggtccaggtaat
gtagaacctcccgccatccagcacgggtgcccacctctgcctccagagtcatcagaagag
gctggacatttacaaattcaacaggaaacttcagttcaatctccagaacctattaataaa
gagaacaccactccaacccagcaggaggctgcagctgagcatccacagaccgctgaggag
ggtgagtcttctccaatccagcaggaggccccagctcagcccttaatgtcccctgagcag
tttcaacatttgaaagaccagcaagacattataattcagcagctaaatagacctgaaaat
tatgaacctcctccagtccataaagagcctacaactcagcctccaactcagctctcctca
gactttgtaagttcaatggatgatgaagcaataggttcacctccagatgtgtcatatcta
gatctagatagggagcttaccaaacctacagcagtcactatgtgggtagaaccttctcca
gtccagcaggacaacccttctattcccactgagcaggctgacttttctttaacccagcct
gatctcccttccccacctctgcattctcctgagaagattgaatctccagtccaccaagag
gccacagctcagactccagatccccctaaggaggcagaaccttctccagtccagcaagag
ttcccagctgagccaccagagccccctaaggaggttgaaccatctgcaacccagcaggaa
gcctcagggttccctcaggaggtagaaccatctgtaactcagcaggaggttccagctcag
attccagagccccctgtggaggcagaaccttctctgacccagcaggaggccacagttcag
gctgcagagtcccctagggaggtagaatcttcaaggcagcaaatggtcccagttcagctt
ccagagccacctaaggaagttgcagctcaacctccagctcattatgaggtgacagtccca
acactaggccaggatccagctcagaattcaacattgcccagtgtcactgttcaacctttg
gacctgggacttaccatcattccagaatcaacgacagaggttgaactttctccaaccatg
caggagaccccaactcagcctcctaagaaagctctacaacaacttgtactatatcaagag
gtaaaaattccaacaccaggtcaggatcaagctcagcatccaatgtcacccagcattaca
gttcaacctttggacctgggacttaccatcactccagaacccactatggaggttgaacat
tctacacccctgaagagaactatagttcctccaaagcaccttaagaacaccctgaggtgt
tcaccttcagacaagggtcaggctcagctttcacacctgaccgaagccacagttcaacct
ctggacctggagcttagcataactacagagcctactacagaggttaaaccatctccaacc
acggaggaaacctcagctcagcctctagacccggggcttgccataactccagaacctact
acagagattggacattccacagccctggagaagactagagctcctcatccagaccaggtt
cagactctgcatcgaagcctgactgaagtcacaggtccacctacaaagttagaatcttcg
caggattcattggtgcagtctgaaactgcaccagaggaacagaaggcctccacaggcacc
aacatatgtgagctctgcacctgcggagatgagactctgtcatgtgttggtctcagccca
aagcagaggctccgccaagtgcctgtgccagagccctacacctacaatggcatcttcacc
accttgtaa

>gi568815581f:30871074_31099188|GENSCAN_predicted_peptide_6|20_aa
MAAHRPVEWVQAVVSRFDEQ

>gi568815581f:30871074_31099188|GENSCAN_predicted_CDS_6|60_bp
atggccgcgcacaggccggtggaatgggtccaggccgtggtcagccgcttcgacgagcag