GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:35:35

Sequence gi568815582f:24156755_24461860 : 305106 bp : 43.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7732   7792   61  0  1   60  101    77 0.978   7.61
 1.02 Intr +   9728   9752   25  0  1  103  111    17 0.831   2.58
 1.03 Intr +  12641  12804  164  2  2   59  107    18 0.310   0.42
 1.04 Intr +  15442  15607  166  2  1   23   75   185 0.418   9.72
 1.05 Intr +  17764  17826   63  1  0   90  131    49 0.991   7.23
 1.06 Intr +  24036  24174  139  0  1   77   78   150 0.984  13.37
 1.07 Intr +  28357  28437   81  0  0  107   91    74 0.998   9.43
 1.08 Intr +  28706  28813  108  1  0   83   98   163 0.999  17.28
 1.09 Intr +  34336  34476  141  0  0   56   87   144 0.944  11.65
 1.10 Term +  63207  63359  153  2  0   65   43   193 0.924  10.42
 1.11 PlyA +  65174  65179    6                               1.05

 2.00 Prom +  65335  65374   40                              -2.36
 2.01 Init +  75337  75343    7  0  1   62  119     7 0.558   1.88
 2.02 Term +  79179  79264   86  1  2   91   45    68 0.596   0.62
 2.03 PlyA +  80244  80249    6                               1.05

 3.05 PlyA -  80521  80516    6                               1.05
 3.04 Term -  93291  93194   98  1  2   49   43    91 0.686  -1.17
 3.03 Intr -  93665  93519  147  0  0  -20   14   500 0.229  32.01
 3.02 Intr -  97040  96903  138  0  0   60   87   100 0.806   7.54
 3.01 Init -  97106  97094   13  2  1   69  113     5 0.765   1.67
 3.00 Prom - 113300 113261   40                              -3.36

 4.00 Prom + 117559 117598   40                               0.14
 4.01 Init + 128878 128880    3  0  0  108   81     0 0.197   1.30
 4.02 Term + 136545 136679  135  2  0   84   41    99 0.403   2.82
 4.03 PlyA + 138698 138703    6                               1.05

 5.00 Prom + 142838 142877   40                              -1.86
 5.01 Init + 153286 153339   54  0  0   52  110    24 0.278   2.41
 5.02 Intr + 168728 168911  184  1  1   23   91   136 0.573   6.76
 5.03 Intr + 174005 174070   66  0  0   89   97    48 0.808   4.68
 5.04 Intr + 189953 190063  111  0  0  107   85   148 0.557  16.75
 5.05 Intr + 198079 198219  141  2  0  102  109   133 0.992  17.12
 5.06 Term + 204598 205109  512  2  2   91   43   445 0.999  34.84
 5.07 PlyA + 206029 206034    6                               1.05

 6.03 PlyA - 206329 206324    6                               1.05
 6.02 Term - 208824 208778   47  1  2  100   43    20 0.370  -3.93
 6.01 Init - 209127 208896  232  0  1   76   50   134 0.659   6.82
 6.00 Prom - 220383 220344   40                              -3.36

 7.00 Prom + 221045 221084   40                              -1.66
 7.01 Init + 227279 227322   44  1  2   61   69    32 0.318  -1.51
 7.02 Intr + 231779 231906  128  2  2  102   20   131 0.198   8.02
 7.03 Intr + 238580 238681  102  0  0  100   33    60 0.104   1.85
 7.04 Term + 249726 249829  104  1  2   45   38   103 0.561  -0.56
 7.05 PlyA + 249930 249935    6                               1.05

 8.00 Prom + 262357 262396   40                              -2.26
 8.01 Init + 275395 275423   29  0  2   56  117    39 0.479   2.67
 8.02 Intr + 276677 276729   53  2  2   59   81    50 0.491  -0.05
 8.03 Intr + 276822 276927  106  1  1   80   97    86 0.709   7.97
 8.04 Intr + 282814 282874   61  1  1   63  101     3 0.080  -2.16
 8.05 Term + 297864 298037  174  2  0   99   50   101 0.411   5.16
 8.06 PlyA + 300936 300941    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_1|366_aa
MTILKKPFKVKQTSQFEEKDAIIAIKSGTVRPRTFVLAYVTLHDASLSTTLGSSPTLSPF
FFLLQAHEVCSSLRAFAQPVSPPALPPLSIWSPRSYGMLMLLFAVLFQDRLYFVMEYVNG
GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF
GMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED
EDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW
EKLERKEIQPPYKPKARDKRDTSNFDKEFTRQPVELTPTDKLFIMNLDQNEFAGFSYTNP
EFVINV

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_1|1101_bp
atgacaattttgaagaagccctttaaagtcaagcagactagccagtttgaagagaaagat
gcaataatagccatcaaatcaggaacagtgagaccccgaacctttgtgttagcctacgtg
accttacatgatgcgtccctcagcaccaccctgggctcatctcctaccctgtcccccttc
ttctttcttctccaagcacatgaggtgtgctctagcctcagggccttcgcacagcctgtt
tctccgcctgctcttcccccactgtccatttggagccccagaagctacgggatgctaatg
ttgctgtttgctgtcctcttccaggaccgcctgtactttgtgatggagtacgtgaatggg
ggcgacctcatgtatcacatccagcaagtcggccggttcaaggagccccatgctgtattt
tacgctgcagaaattgccatcggtctgttcttcttacagagtaagggcatcatttaccgt
gacctaaaacttgacaacgtgatgctcgattctgagggacacatcaagattgccgatttt
ggcatgtgtaaggaaaacatctgggatggggtgacaaccaagacattctgtggcactcca
gactacatcgcccccgagataattgcttatcagccctatgggaagtccgtggattggtgg
gcatttggagtcctgctgtatgaaatgttggctgggcaggcaccctttgaaggggaggat
gaagatgaactcttccaatccatcatggaacacaacgtagcctatcccaagtctatgtcc
aaggaagctgtggccatctgcaaagggctgatgaccaaacacccaggcaaacgtctgggt
tgtggacctgaaggcgaacgtgatatcaaagagcatgcatttttccggtatattgattgg
gagaaacttgaacgcaaagagatccagcccccttataagccaaaagctagagacaagaga
gacacctccaacttcgacaaagagttcaccagacagcctgtggaactgacccccactgat
aaactcttcatcatgaacttggaccaaaatgaatttgctggcttctcttatactaaccca
gagtttgtcattaatgtgtag

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_2|30_aa
MAVYAFKQLFWGESVGAHTGRSESLATCLL

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_2|93_bp
atggctgtctatgccttcaagcagcttttctggggagagagtgttggcgcccacactggc
agatctgagtccctggccacgtgcctgctgtga

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_3|131_aa
MLMKDPQWNSSIFISTHLALQQKRRQAEYGAQEPSRRIVGGKGSGAQVDEEEEEEEEEEE
KEEEKEEEGEEEEEEEEEEEEEEEEEEEEEEEEEEDVVVESSDDQAKTTTSSLGFISILY
GCQTIVCIRVA

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_3|396_bp
atgttgatgaaagacccacagtggaacagcagcatcttcatctccacccacttagctcta
caacagaagcgcagacaagcagagtatggtgcccaggagcctagcagaaggatagttggg
ggaaaaggatcaggagctcaggtagatgaagaagaagaggaggaggaggaggaggaggag
aaggaggaggaaaaagaagaagaaggagaagaagaggaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagatgttgttgttgag
tcttccgatgatcaggccaagactaccacatcctcgttgggcttcatctccatcctctat
ggttgccaaaccatagtgtgcattagagtcgcttag

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_4|45_aa
MKERMGLDDLNGPPTLMFILWFSLALPLYLTANEEHRLGSHTAYI

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_4|138_bp
atgaaggagaggatgggtctagatgacctcaatggtcctccaactctgatgttcatcctc
tggttctctttagccttgcccctctacttgacagccaatgaagagcacagacttgggagc
cacactgcctacatttga

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_5|355_aa
MSKTRSRVITKEIAGAIQEPDPSAGVHQLECIAERKPRQPQRALRLGEGAQYCYAARAGD
SQFMSRLIPITLMLTTSPTEAPEASVVWKQDEFFMLLNACQGSEPLSVSTGAFRGVCKKI
DHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGGLCVAASEFHRSRHNVILSAGI
FFVSAGLSNIIGIIVYISANAGDPGQRDSKKSYSYGWSFYFGAFSFIIAEIVGVVAVHIY
IEKHQQLRAKSHSEFLKKSTFARLPPYRYRFRRRSSSRSTEPRSRDLSPISKGFHTIPST
DISMFTLSRDPSKITMGTLLNSDRDHAFLQFHNSTPKEFKESLHNNPANRRTTPV

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_5|1068_bp
atgagcaagaccagaagcagagtgatcacaaaggagattgctggggccatccaggagcca
gaccccagtgctggcgtacatcagctggaatgcattgctgagcgcaagccccgccaaccc
cagcgagctctgcggctgggagaaggtgcccagtactgttatgcagcacgggctggtgat
tcacagtttatgagccgcctcatacccatcactttgatgctcacaacaagcccgacagaa
gctccagaagcctctgtggtctggaaacaggatgagttcttcatgcttttgaatgcctgc
caaggctcagaacccttatctgtttccacaggggctttccgaggcgtgtgcaagaaaatc
gatcacttccctgaagatgctgactacgaacaggacacagccgaatatctcctgcgagct
gtgagggcctccagtgtcttccccatcctcagtgtcacgctgctgttcttcggcgggctc
tgcgtggcagccagtgagttccaccgcagcagacacaacgtcattctcagcgcgggcatc
ttttttgtctctgcagggttaagcaacatcattggcatcatagtttatatatcagccaac
gccggagaccccgggcagcgtgactccaaaaaaagttactcctatggttggtccttttat
ttcggagccttctctttcatcatcgcagaaattgtaggagtggttgccgtgcacatctat
attgaaaaacatcagcagttacgagccaaatcccactcggagttcctgaagaaatctact
tttgcccgcctcccaccctacaggtatcgattccggaggcggtcaagttctcgctccacc
gagcccagatcccgagacctgtcccccatcagcaaaggcttccacaccatcccttccact
gacatctcgatgttcaccctctcccgggacccctcaaagatcaccatggggaccctcctc
aactccgaccgggaccacgcttttctacagttccacaattccacacccaaagagttcaaa
gagtcactgcataataatccggccaacaggcgcaccacgcccgtctga

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_6|92_aa
MSEVHGTVSDTEGGGLVNGNNLPVDLDGKDRPESWLQPRSGNINIYLMPASGVQLSSCQA
KVSRGSCAKAFQGANLDALWPLQKDFILDYQG

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_6|279_bp
atgagtgaagttcatggcacagtgtctgacacagagggtggcggcttagtgaatggaaat
aatcttccagtggatttggatggcaaggataggcctgaatcctggctgcaacccagaagt
ggtaatattaatatctatctgatgccagccagcggggttcaactgagcagctgtcaagca
aaggtatcccgaggctcctgtgccaaagcttttcagggagcaaacctagatgcactctgg
cctttgcagaaggactttattcttgactaccagggctga

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_7|125_aa
MPCPQAELYLPPPENCVEKRSECQYMQESLVNWAEADDLTFGPKGNLLFPIGPHLIITPA
GESLSAPPTKLYENEVKAFLHSLSQMRSEIQGFSWQSNRSNQCKRSGMQATECQGYMQLS
VGGYG

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_7|378_bp
atgccctgtcctcaagctgagctctacctgccacccccagaaaactgtgtggagaagagg
agcgagtgtcagtacatgcaggaatctctggtcaactgggctgaagctgatgacttgacc
ttcggacctaaggggaacctcttgttccccattggtccacatcttatcatcactcctgct
ggggagagcctctcagcccctccaaccaagctctatgagaatgaggtgaaggcatttctt
cactccctttcccagatgagatctgagatccaaggcttcagttggcagagcaacagaagc
aaccaatgcaagcggtcagggatgcaagccactgaatgtcagggatacatgcagctgagt
gtcggcggctacggatag

>gi568815582f:24156755_24461860|GENSCAN_predicted_peptide_8|140_aa
MLSEGKGNDRNMKLLNIAKRKPNQILRTSSPTFSKSKLCTFFDSPEDPSPQESSSKEHSE
ASCSPYVSLHLYPLKYPLSQMANIGHCQPQFIVLLIDSSATPPEAPPPFTTNASLHSGFV
AADCISNLTLLLASVSLTGW

>gi568815582f:24156755_24461860|GENSCAN_predicted_CDS_8|423_bp
atgttgtcagaaggcaaagggaacgaccgaaatatgaaattgctgaacattgcaaagaga
aagcccaaccagatattgagaacctcctctcctacattttccaaatccaaactttgcacc
ttctttgacagccctgaggaccccagcccccaggagagcagctccaaggaacattcagaa
gcaagttgctcgccctatgtatctcttcatctgtatcctttgaaatatcctttatcacaa
atggcaaatattggccactgccagccccagttcatcgtcctgttgatagacagctcagcc
acccctccagaggcccctccacccttcaccaccaatgcctctcttcactctggctttgtt
gctgctgactgtataagcaacttgacacttctgcttgcctctgtgtctctcactggctgg
tag