GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:22:27

Sequence gi568815582r:11737848_11951512 : 213665 bp : 44.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    606    504  103  2  1  118   75    54 0.399   7.28
 1.13 Intr -   4983   4630  354  2  0  -26   94   479 0.337  31.50
 1.12 Intr -  14985  14822  164  0  2   74   77   236 0.961  19.87
 1.11 Intr -  18523  18390  134  2  2   46   79    74 0.853   2.66
 1.10 Intr -  25812  25631  182  2  2   79   96    97 0.845   9.11
 1.09 Intr -  27306  27206  101  0  2  110   44     7 0.863  -2.59
 1.08 Intr -  27838  27642  197  2  2  110   85   102 0.994  11.23
 1.07 Intr -  33140  32936  205  2  1  131   94   -32 0.756   0.47
 1.06 Intr -  36672  36389  284  1  2   89  115   164 0.945  16.34
 1.05 Intr -  37166  37133   34  2  1  102   91    32 0.999   2.70
 1.04 Intr -  38685  38605   81  0  0   97   99    -1 0.769   1.73
 1.03 Intr -  39062  38904  159  2  0   80   80   118 0.999  10.38
 1.02 Intr -  41516  41319  198  2  0  101  101   118 0.999  13.95
 1.01 Init -  59483  59277  207  2  0   51   91   186 0.948  12.02
 1.00 Prom -  60452  60413   40                              -6.56

 2.12 PlyA -  60637  60632    6                               1.05
 2.11 Term -  61951  61745  207  1  0  101   42    79 0.125   1.94
 2.10 Intr -  66233  66136   98  0  2   29  105    48 0.046   0.33
 2.09 Intr -  80150  80015  136  2  1   63   77    53 0.059   1.84
 2.08 Intr - 100266 100006  261  0  0   89   28   122 0.463   3.98
 2.07 Intr - 102138 101848  291  0  0   58   57   187 0.847   9.93
 2.06 Intr - 103973 103848  126  2  0   75   30    74 0.688   1.18
 2.05 Intr - 104153 104060   94  1  1   48   77   106 0.748   5.47
 2.04 Intr - 108996 108848  149  0  2   85  100    17 0.604   1.63
 2.03 Intr - 109959 109821  139  2  1   83   91    32 0.325   3.47
 2.02 Intr - 112571 112432  140  2  2   98   87   -36 0.269  -3.44
 2.01 Init - 113665 113561  105  1  0   84  109   110 0.549  12.51
 2.00 Prom - 120276 120237   40                              -4.16

 3.14 PlyA - 121417 121412    6                               1.05
 3.13 Term - 126485 126414   72  2  0   98   37    39 0.137  -2.29
 3.12 Intr - 138328 138239   90  1  0   50   79    70 0.816   2.49
 3.11 Intr - 139733 139560  174  2  0   61   97   161 0.999  14.44
 3.10 Intr - 145329 145168  162  0  0    8  116   118 0.658   6.77
 3.09 Intr - 147427 147334   94  0  1   79   75    64 0.996   4.17
 3.08 Intr - 148764 148624  141  2  0   58  103    64 0.883   4.37
 3.07 Intr - 149084 148930  155  2  2   44   83    78 0.994   1.77
 3.06 Intr - 149883 149723  161  1  2   43   99   116 0.268   7.91
 3.05 Intr - 158938 158711  228  2  0   29   87   157 0.183   7.54
 3.04 Intr - 160034 159993   42  0  0   77   91    37 0.208   1.11
 3.03 Intr - 177859 177522  338  0  2   19   70   670 0.311  53.46
 3.02 Intr - 178533 178291  243  2  0   77   26   197 0.572   9.01
 3.01 Init - 183753 183665   89  0  2   72   90    40 0.785   2.74
 3.00 Prom - 184958 184919   40                              -5.06

 4.00 Prom + 186038 186077   40                              -2.66
 4.01 Init + 187424 187464   41  1  2   80   81    16 0.949  -0.22
 4.02 Intr + 188351 188457  107  2  2   93  101   162 0.984  17.86
 4.03 Term + 193386 193546  161  1  2   40   43   131 0.235   1.90
 4.04 PlyA + 193937 193942    6                              -3.44

 5.05 PlyA - 194400 194395    6                              -0.45
 5.04 Term - 195814 195666  149  2  2   47   44   184 0.965   7.96
 5.03 Intr - 196077 195978  100  0  1   69   86    64 0.973   3.98
 5.02 Intr - 199821 199693  129  0  0   82   92    32 0.931   3.89
 5.01 Init - 203396 203322   75  2  0   70   56   113 0.985   5.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:11737848_11951512|GENSCAN_predicted_peptide_1|801_aa
MAASPGRQARPPAARGRRRGRNRAAAAAANRGRAASEHPGPAAAAATAARLPPPASACLL
PPAGASSPQVYLRALVRNLFNEGNDVYREHDWNNSISQYTEALNIADYAKSEEILIPKEI
IEKLYINRIACYSNMGFHDKVLEDCNIVLSLNASNCKALYRKSKALSDLGRYKKAYDAVA
KCSLAVPQDEHVIKLTQELAQKLGFKIRKAYVRAEALNHSVEDIEPDLLTPRQEAVPVVS
LPAPSFSHEVGSELASVPVMPLTSILPLQVEESALPSAVLANGGKMPFTMPEAFLDDGDM
VLGDELDDLLDSAPETNETVMPSALVRGPLQTASVSPSMPFSASLLGTLPIGARYAPPPS
FSEFYPPLTSSLEDFCSSLNSFSMSESKRDVAAEEECRYSGHCTFAYCQEEIDVWTLERK
GAFSREAFFGGNGKINLTVFKLLQEHLGEFIFLCEKCFDHKPRMISKRNKDNSTACSHPV
TKHEFEDNKCLVHILRETTVKYSKIRSFHGQCQLDLCRHEVRYGCLREDECFYAHSLVEL
KVWIMQNETVQDMEQFYELWLKSQKNEKSEDIASQSNKENGKQIHMPTDYAEVTVDFHCW
MCGKNCNSEKQWQGHISSEKHKEKVFHTEDDQYCWQHRFPTGYFSICDSGCGELRDWGAT
GRAGPSGPRRRRRYKAGDWEHVMSECGGRGGGSSSSEDAEDEGGGGGGPAGSDCLSSSPT
LATASSAGRLRRGLRGAFLMARQRPELLCGAVALGCALLLALKFTCRKWSPRQHAVLAAA
ALVLVPKAQSQLLSKEFLNNC

>gi568815582r:11737848_11951512|GENSCAN_predicted_CDS_1|2403_bp
atggcggcgtctcccgggcggcaagcgcggcctcccgccgctagagggcgccgccgcggg
cgcaaccgagccgctgccgccgccgctaaccgagggagagctgcgagcgagcacccaggc
cccgccgccgccgccgccaccgctgcccgcctgccgccgcccgcctccgcctgccttctg
ccgccggccggcgcgtcgtccccacaggtatatttgcgtgctctcgtgagaaatcttttt
aatgaaggaaatgacgtttatcgggaacatgattggaacaactcgataagccagtacacg
gaagccttgaatatagctgattatgcaaaatctgaagaaattttaatccccaaagaaata
attgaaaaactatatataaatcgtattgcctgctattctaatatgggtttccatgataaa
gttttggaggactgcaatatagtcctcagtttaaatgccagtaactgcaaagctctgtat
cggaaatctaaggctttaagtgatttaggaagatacaaaaaggcttacgatgctgtagca
aagtgctccttagcagtgcctcaggatgagcatgtaataaaactaactcaagaactagct
cagaaattgggatttaaaataagaaaagcgtatgtcagagctgaggctttgaaccattct
gtggaagatattgagccagatttattaactccaaggcaagaagcagttcctgttgtctct
ttaccggcacccagtttttctcatgaagttggaagtgagctggcctcagttcctgttatg
cccttaacttctattttgccactacaagtggaagagagcgctctgccatctgcagtgctg
gcaaatggaggaaagatgcccttcactatgccagaagcttttctagatgatggagatatg
gtccttggagatgaactagatgacctgcttgattctgcacctgaaactaatgaaactgtt
atgccgtcagctttagtcagaggaccccttcagacagccagtgtctctcctagcatgccc
ttttcggcatcgctgttaggaaccttacccattggtgcgaggtatgctcctccaccctcc
ttctcagaattttatccacctttgacttcatccttagaagatttttgttcttctttaaat
tcattttcaatgagtgaatccaaacgagatgttgctgctgaggaggaatgtagatattca
ggccactgcacgtttgcttattgccaagaggagatagatgtgtggacactggagcggaaa
ggagcattcagccgggaggctttctttggcggcaatggaaagattaaccttactgtgttc
aaacttctccaggagcatcttggggaatttatattcctttgtgagaaatgttttgatcat
aagcctagaatgataagtaaaagaaataaagataattctactgcttgttctcacccggtt
acaaagcatgagtttgaagacaataagtgccttgtccacattttgcgagagacaacagta
aaatactccaaaatacgttcttttcatggtcagtgtcagcttgatttatgtcgacatgaa
gttcggtatggctgtttaagggaagatgagtgcttttatgcccatagtcttgtggaactg
aaagtctggataatgcaaaatgaaacagtacaagatatggagcaattttacgaactatgg
ctcaagagtcaaaaaaatgaaaaaagtgaagacatagccagtcagtcaaacaaggaaaat
ggaaaacaaattcacatgccaacagattatgctgaagttacagtggactttcactgctgg
atgtgtgggaaaaactgcaacagtgagaagcagtggcagggccacatctcctccgagaag
cacaaagagaaggttttccacaccgaggacgaccagtactgctggcagcaccgcttccca
acaggctatttcagtatttgtgatagcgggtgcggcgagctgcgggattggggagcaacg
ggccgggccgggccttcgggcccgaggcggcggcggcggtataaagccggcgactgggag
catgtaatgtcggaatgcggaggccgcggcggcggcagcagcagcagcgaggacgccgag
gacgagggagggggcggcggcggccccgcgggctcagactgcctcagctcgagcccgacc
ctggccacagcgtcctcggcgggccggctccgtcgcgggctgcgtggcgccttcctcatg
gcgcgccagcggccggagctgctctgcggggccgtggcgctcggctgcgcgctgctcctc
gccctcaagttcacctgcagaaagtggtctcctcgacaacacgcagtgctagctgccgca
gccttagtgcttgtgcccaaagcacagtcacagctgctcagtaaagaatttttgaataat
tgt

>gi568815582r:11737848_11951512|GENSCAN_predicted_peptide_2|581_aa
MEDSASASLSSAAATGTSTSTPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNE
NESLFLMVVLWKIPSKELRVRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNK
HGIKTVSQIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKNAI
RIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSFVSNWDEA
TKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGDTTVKKPE
SKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHATGKKSPA
KSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLGKKDARQT
PKKPEAKFFTTPSKSIMAFVSSHVSVWLFVTTIQCLRAQGSGNFQRAEHGEVPGGWLTQE
AERKTKATGNNPIILTPNTAENRYNMQRGGGFKVSRTWKLAGAGVSPVSRDLLSLLATGL
DEVISDHDDCLEDQIGRCVSEQLLDGLSVKASPREATVVEA

>gi568815582r:11737848_11951512|GENSCAN_predicted_CDS_2|1746_bp
atggaggattcggcctcggcctcgctgtcttctgcagccgctactggaacctccacctcg
actccagcggccccgacagcacggaagcagctggataaagaacaggttagaaaggcagtg
gacgctctcttgacgcattgcaagtccaggaaaaacaattatgggttgcttttgaatgag
aatgaaagtttatttttaatggtggtattatggaaaattccaagtaaagaactgagggtc
agattgaccttgcctcatagtattcgatcagattcagaagatatctgtttatttacgaag
gatgaacccaattcaactcctgaaaagacagaacagttttatagaaagcttttaaacaag
catggaattaaaaccgtttctcagattatctccctccaaactctaaagaaggaatataaa
tcctatgaagccaagctccgccttctgagcagttttgatttcttccttactgatgccaga
attaggcggctcttaccctcactcattgggagacatttctatcaaagaaagaatgctata
cgtattggtcacgttggaatgcaaattgagcacatcattgaaaacattgttgctgtcacc
aaaggactttcagaaaaattgccagagaagtgggagagcgtgaaactcctgtttgtgaaa
actgagaaatcggctgcacttcccatcttttcctcgtttgtcagcaattgggatgaagcc
accaaaagatctttgcttaataagaagaaaaaagaggcaaggagaaaacgaagagaaaga
aattttgaaaaacaaaaggagaggaagaagaagaggcagcaggctaggaagactgcatca
gttcttagtaaagatgatgtggcacctgaaagtggtgatactacagtgaagaaacctgaa
tcaaagaaggaacagaccccagagcatgggaagaaaaaacgtggcagaggaaaagcccaa
gttaaagcaacaaatgaatccgaagacgaaatcccacagctggtaccaataggaaagaag
actccagctaatgaaaaagtagagattcaaaaacatgccacaggaaagaagtctccagca
aagagtcctaatcccagcacacctcgtgggaagaaaagaaaggctttgccagcatctgag
accccaaaagctgcagagtctgagaccccagggaaaagcccagagaagaagccaaaaatc
aaagaagaggcagtgaaggaaaaaagtccttcgctggggaaaaaagatgcgagacagact
ccaaaaaagccagaggccaagtttttcaccactcctagtaaatctatcatggcctttgtg
tccagtcatgtttctgtctggttgttcgtcacaactatccagtgcctaagagcacagggt
tcagggaacttccagagagctgaacacggggaggttcctggagggtggctgacccaagaa
gctgaaaggaaaaccaaggcaaccggaaataatcctattatactgactcctaatacagct
gagaacaggtacaacatgcagaggggtggaggattcaaggtgtcaagaacctggaaactg
gctggggctggggtgtcaccagtatccagagacctcctgagccttctggcaacaggacta
gacgaggtcatttcagatcatgatgactgcttggaagatcagatagggcgctgtgttagt
gagcaacttttagatgggctgtcagtgaaggcctctccaagagaggctactgtagttgag
gcctga

>gi568815582r:11737848_11951512|GENSCAN_predicted_peptide_3|662_aa
MSHSAQLAIISLTHLQAFLIRILNREGFSSLCPAGQSGPLLWAKILSVFGPAQSCTNQGL
PLPPHQVTGGAAERPPDLRLLALPAGSRSRFRLRPVPELRLPSAPGKTAAGGGGGGGGGG
GGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAK
PFVPNVHAAEFVPSFLRGPAAPPPPVGGAANNHGAGSGAGGRAGSNSAVSMELSEPIVEN
GETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP
KKEHVNVVFIGHVDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAS
QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERY
EECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNF
NRSVDGPIRLPIVDKYKCRISLWAIELLYSTKKSETGFYFTFDQDMGTVVLGKLESGSIC
KGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLC
HSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITIYSILCMNNFSKSFYRSLIDD
VA

>gi568815582r:11737848_11951512|GENSCAN_predicted_CDS_3|1989_bp
atgagccacagcgcccagctggctattatatctttaacacatctccaagctttcctcatc
cgcattttgaacagggagggcttcagcagcctgtgtccagcaggccagagtggacccctc
ctatgggctaaaatactctcggtcttcggcccagcacagagctgcaccaaccagggcctg
ccgctgcccccccaccaggtgacaggtggggccgccgagcggccaccagacctccgcctc
ctcgcgttgcctgccgggagccggagccgcttccggttgcgccctgtccctgaacttcga
ctcccgtcggcccccgggaaaaccgcagcgggtggcggcggcggcggcggcggcggcggc
ggcgggagcagcagcggcagcagcagcagcgactcggcgcctgactgctgggaccaggcg
gacatggaagcccccgggccgggcccttgcggcggcggcggctccctggcggcggcggcc
gaggcccagcgggagaacctcagcgcggccttcagccggcaactcaacgtcaacgccaag
cccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccggca
gcgccgccacccccagttggcggcgccgccaataaccacggagccggcagcggcgcggga
ggccgtgcgggttcaaattcagctgttagcatggaactttcagaacctattgtagaaaat
ggagagacagaaatgtctccagaagaatcatgggagcacaaagaagaaataagtgaagca
gagccagggggtggttccttgggagatggaaggccgccagaggaaagtgcccatgaaatg
atggaggaggaagaggaaatcccaaaacctaagtctgtggttgcaccgccaggtgctcct
aagaaagagcatgtaaatgtagtattcattgggcacgtagacacaaatcaggaagaacga
gacaagggtaaaacagtagaagtgggtcgtgcctattttgaaaccgaaaagaagcatttc
acaattctagatgcccctggccacaagagttttgtcccaaatatgattggtggtgcctct
caagctgatttggctgtgctggtaatctcagccaggaaaggagagtttgaaactggattt
gaaaaaggaggacagacaagagaacatgcaatgttggcaaagacagcaggtgtaaaacac
ctaattgtgctaattaataagatggatgatccaacagtaaattggagcaatgagagatat
gaagaatgtaaggagaaactagtgccatttttgaaaaaagttggcttcaatcccaaaaag
gacattcactttatgccctgctcaggacttactggagcaaatctcaaagagcagtcggat
ttctgtccttggtacattggattaccgtttattccatatctggataatttgccgaacttc
aatagatcagttgatggaccaatcaggctgccaattgtggataagtacaagtgtagaatt
tcactttgggctattgagctgttatacagcaccaagaagtctgaaactggattttatttt
acatttgatcaggatatgggcactgtggtcctgggaaagctggaatcaggatctatttgt
aaaggccagcagcttgtgatgatgccaaacaagcacaacgtggaagttcttggaatactt
tccgatgatgtagagactgataccgtagccccaggtgaaaacctcaaaatcagactgaaa
ggaattgaagaagaggagattcttccagggtttatactttgtgatcctaataatctttgt
cattctggacgcacatttgatgcccagatagtgattatagagcacaaatccatcatctgc
ccaggctataatgcggtgctgcatattcatacctgtattgaggaggtggaaataacaatt
tattcaattctgtgcatgaataacttctctaagtccttttatagatccctgattgatgac
gtagcataa

>gi568815582r:11737848_11951512|GENSCAN_predicted_peptide_4|102_aa
MKGGNPILREGVAWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGDNGKPSTLVL
TDFNKVQFTEIEGRKRKRPKKGKFAVLPSHHLIHGPDPKDLT

>gi568815582r:11737848_11951512|GENSCAN_predicted_CDS_4|309_bp
atgaagggagggaatccaattttacgagagggtgtagcctggtgctgccatggccacgac
tgttgttacactcgagctgaggaggccggctgcagccccaagacagagcgctactcctgg
cagtgcgtcaatcagagcgtcctgtgcggtgacaacggcaaaccatccaccctggtgttg
actgactttaacaaggttcagttcacagagattgagggcagaaaaaggaaacggcctaaa
aagggtaagtttgctgtgttgccctcacaccacttgattcatggtcctgatcctaaggat
ctcacctga

>gi568815582r:11737848_11951512|GENSCAN_predicted_peptide_5|150_aa
MRVLWMLFWLLFWLLLEFISHQSTCVINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVL
TLWTVYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETK
GRAKIRKMKVTTKINHHDKINGKRKTAKKQ

>gi568815582r:11737848_11951512|GENSCAN_predicted_CDS_5|453_bp
atgcgggtgctgtggatgctcttttggctcctcttttggctcctgctggaatttatcagc
catcagtccacctgtgttatcaatactctggctgaccatcatcatcgtgggactgacttt
ggtggaagtccttggttacgtatcattattgcatttccgagaagttataaagttgtcctt
accctctggacagtttacctttggttgtctttcctgaagactatcttccagtctgaaaat
ggacatgatgtatccacagatgtacagcagagagccaggaggtccaaccgccgtagacag
gaaggaaataaaattggcctgaaagacgtcattactctacggagacatgtggaaacaaaa
ggtagagctaaaatccgtaagatgaaggtgacaacgaaaatcaaccatcatgacaaaatc
aatggaaagaggaagaccgccaaaaaacagtaa