GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:38:25

Sequence gi568815583r:78496607_78718918 : 222312 bp : 44.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10990  11065   76  0  1   63  105    52 0.446   3.49
 1.02 Intr +  16478  16819  342  0  0  123   82   243 0.963  22.60
 1.03 Intr +  18416  18501   86  0  2   44  110    69 0.692   4.24
 1.04 Intr +  30792  30957  166  2  1   15   82   163 0.843   7.93
 1.05 Term +  36604  37064  461  2  2  123   42   279 0.994  22.05
 1.06 PlyA +  38016  38021    6                               1.05

 2.00 Prom +  38521  38560   40                              -4.76
 2.01 Init +  42732  42804   73  2  1   85   66    65 0.787   5.23
 2.02 Intr +  43814  43933  120  0  0   57   93   136 0.906  11.47
 2.03 Intr +  45877  46039  163  2  1   83   80   107 0.974   8.43
 2.04 Intr +  48263  48351   89  2  2  100   53    33 0.990   0.61
 2.05 Intr +  49028  49158  131  0  2   67   68    89 0.996   5.21
 2.06 Intr +  49969  50092  124  0  1   71   86    57 0.995   3.96
 2.07 Term +  52184  52338  155  0  2   71   39   137 0.903   5.18
 2.08 PlyA +  52565  52570    6                               1.05

 3.00 Prom +  64558  64597   40                              -4.26
 3.01 Init +  69114  69219  106  2  1  102   99   200 0.965  20.88
 3.02 Intr +  84205  84356  152  2  2   47   66    83 0.038   1.88
 3.03 Intr +  91708  91817  110  0  2   50   97    47 0.864   0.88
 3.04 Intr +  93199  94030  832  1  1   63   58   424 0.301  28.30
 3.05 Term +  96486  96647  162  2  0  121   48    11 0.225  -1.66
 3.06 PlyA +  97494  97499    6                               1.05

 4.08 PlyA -  97541  97536    6                               1.05
 4.07 Term - 100126  99998  129  1  0  112   47    28 0.636  -0.72
 4.06 Intr - 105658 104647 1012  0  1  122   94  1392 0.996 133.90
 4.05 Intr - 111918 111733  186  2  0   74   39   110 0.018   3.50
 4.04 Intr - 120527 120418  110  2  2   53   80   110 0.678   5.78
 4.03 Intr - 122055 122011   45  0  0  122  108    58 0.999   9.81
 4.02 Intr - 122309 122170  140  0  2   38   89   179 0.809  13.18
 4.01 Init - 124188 124107   82  0  1   96  101   313 0.994  32.53
 4.00 Prom - 126734 126695   40                              -5.96

 5.08 PlyA - 126802 126797    6                               1.05
 5.07 Term - 128685 128527  159  0  0  137   55   240 0.998  23.54
 5.06 Intr - 130789 130688  102  1  0    3   30   146 0.594   0.67
 5.05 Intr - 133339 132361  979  0  1   52   84  1602 0.979 147.14
 5.04 Intr - 134579 134470  110  2  2   56   89   212 0.590  17.18
 5.03 Intr - 134726 134682   45  2  0  112  111    70 0.998  10.31
 5.02 Intr - 138981 138833  149  1  2   64   66   247 0.627  20.05
 5.01 Init - 144527 144473   55  2  1   90  101   124 0.905  13.35
 5.00 Prom - 152859 152820   40                              -4.26

 6.07 PlyA - 153407 153402    6                              -0.45
 6.06 Term - 154931 154705  227  0  2  -12   38   172 0.089  -0.86
 6.05 Intr - 156985 156865  121  1  1   24   94    70 0.173   1.27
 6.04 Intr - 157747 157557  191  2  2   56  119    32 0.239   2.40
 6.03 Intr - 164662 164467  196  1  1   87   33   305 0.462  23.89
 6.02 Intr - 164810 164709  102  2  0   47   93   117 0.284   8.47
 6.01 Init - 186751 186635  117  1  0   87   78    61 0.589   5.21
 6.00 Prom - 221209 221170   40                              -3.16


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_1|376_aa
RRCAAEAALPVCGKAGSTPGRRVAADIMSSGNYQQSEALSKPTFSEEQASALVESVFGLK
VSKVRPLPSYDDQNFHVYVSKTKDGPTEYVLKISNTKASKNPDLIEVQNHIIMFLKAAGF
PTASVCHTKGDNTASLVSVGRPIAELPVSPQLLYEIGKLAAKLDKTLQLSSLHRENFIWN
LKNVPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESS
KSASGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPL
TAVEKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMGQKAVE
EIWFETAKSYESGISM

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_1|1131_bp
cgccggtgcgcggccgaggccgcactacctgtctgcgggaaagcgggatccaccccagga
cgtcgggtcgctgccgacataatgtcaagtggaaactatcagcagtcagaggctcttagc
aaacccactttcagtgaggaacaagcctctgcgttagtggagtcagtgtttgggttgaaa
gtttccaaggtccggccacttcctagctatgatgaccaaaactttcatgtctacgtttca
aaaaccaaagatggcccaactgaatatgtcctcaaaataagcaacaccaaggctagcaaa
aatccagacctgattgaagtgcagaatcacatcatcatgtttctgaaagccgctggattt
ccaacagcctctgtgtgtcacactaaaggagacaacacagcttctctcgtgtctgtagga
agacccatcgctgagcttcccgtcagcccccagctattgtatgaaattggaaaactagct
gccaaattggataagacactgcagttaagtagtcttcatcgggagaacttcatctggaat
ctgaaaaatgttcctcttctggagaaatacctgtatgccctgggccagaatcgaaaccga
gagattgttgagcatgtcattcatctgttcaaggaggaagtaatgaccaaattaagtcat
tttcgagaatgtatcaatcacggagatcttaatgaccataatattttaatagagtccagc
aagtcagcctctggaaatgctgaatatcaagtgtctgggattttagactttggtgacatg
agctatggctactatgtgtttgaagtggcaattaccatcatgtacatgatgattgagagc
aagagtcctatacaagtaggaggccatgtccttgcagggtttgaaagcatcaccccactg
acagctgtagagaagggtgctttgtttttacttgtatgcagtcgtttttgtcagtcactt
gtcatggctgcatactcttgccagctatacccagagaacaaagactatctcatggttact
gcaaaaaccgggtggaaacacttacagcaaatgtttgacatgggtcagaaagctgtagaa
gaaatctggtttgaaactgccaaatcctatgaatctgggatctccatgtga

>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_2|284_aa
MDNEHRNKYDNFSKEDKMVRVYADAVLRMRGGHISSGYSVSGGGLFFRGVKGSVDISGLQ
GLPSGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEY
LLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYG
GWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLT
RENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_2|855_bp
atggataatgaacacagaaacaagtatgacaatttcagtaaagaagataaaatggtgcga
gtatatgctgacgcggttctgcgcatgcgcgggggccatattagcagcggttattcggtg
agcggtggtggtttattcttccgtggagttaagggctccgtggacatctcaggtcttcag
ggtcttccatctggtcgcttataccaagttgaatatgccatggaagctattggacatgca
ggcacctgtttgggaattttagcaaatgatggtgttttgcttgcagcagagagacgcaac
atccacaagcttcttgatgaagtctttttttctgaaaaaatttataaactcaatgagtat
ttattacagtatcaggagccaataccttgtgagcagttggttacagcgctgtgtgatatc
aaacaagcttatacacaatttggaggaaaacgtccctttggtgtttcattgctgtacatt
ggctgggataagcactatggctttcagctctatcagagtgaccctagtggaaattacggg
ggatggaaggccacatgcattggaaataatagcgctgcagctgtgtcaatgttgaaacaa
gactataaagaaggagaaatgaccttgaagtcagcacttgctttagctatcaaagtacta
aataagaccatggatgttagtaaactctctgctgaaaaagtggaaattgcaacactaaca
agagagaatggaaagacagtaatcagagttctcaaacaaaaagaagtggagcagttgatc
aaaaaacatgaggaagaagaagccaaagctgagcgtgagaagaaagaaaaagaacagaaa
gaaaaggataaatag

>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_3|453_aa
MAARGSGPRALRLLLLVQLVAGRCGLAGAAGGAQRGLSEPSSIAKHEDSLLKDLFQDYER
WVRPVEHLNDKIKIKFGLAISQLVDVEWIDVKLRWNPDDYGGIKVIRVPSDSVWTPDIVL
FDNADGRFEGTSTKTVIRYNGTVTWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDG
SQVDIILEDQDVDKRDFFDNGEWEIVSATGSKGNRTDSCCWYPYVTYSFVIKRLPLFYTL
FLIIPCIGLSFLTVLVFYLPSNEGEKICLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGE
YLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPLVRKIFLHTLPKLLCMRSHVDRYFT
QKEETESGSGPKSSRNTLEAALDSIRYITRHIMKENDVREVVEDWKFIAQVLDRMFLWTF
LFVSIVGSLGLFVPVIYKWANILIPVHIGNANK

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_3|1362_bp
atggcggcgcgggggtcagggccccgcgcgctccgcctgctgctcttggtccagctggtc
gcggggcgctgcggtctagcgggcgcggcgggcggcgcgcagagaggattatctgaacct
tcttctattgcaaaacatgaagatagtttgcttaaggatttatttcaagactacgaaaga
tgggttcgtcctgtggaacacctgaatgacaaaataaaaataaaatttggacttgcaata
tctcaattggtggatgtggaatggatagatgtaaaattaagatggaaccctgatgactat
ggtggaataaaagttatacgtgttccttcagactctgtctggacaccagacatcgttttg
tttgataatgcagatggacgttttgaagggaccagtacgaaaacagtcatcaggtacaat
ggcactgtcacctggactccaccggcaaactacaaaagttcctgtaccatagatgtcacg
tttttcccatttgaccttcagaactgttccatgaaatttggttcttggacttatgatgga
tcacaggttgatataattctagaggaccaagatgtagacaagagagatttttttgataat
ggagaatgggagattgtgagtgcaacagggagcaaaggaaacagaaccgacagctgttgc
tggtatccgtatgtcacttactcatttgtaatcaagcgcctgcctctcttttataccttg
ttccttataataccctgtattgggctctcatttttaactgtacttgtcttctatcttcct
tcaaatgaaggtgaaaagatttgtctctgcacttcagtacttgtgtctttgactgtcttc
cttctggttattgaagagatcataccatcatcttcaaaagtcatacctctaattggagag
tatctggtatttaccatgatttttgtgacactgtcaattatggtaaccgtcttcgctatc
aacattcatcatcgttcttcctcaacacataatgccatggcgcctttggtccgcaagata
tttcttcacacgcttcccaaactgctttgcatgagaagtcatgtagacaggtacttcact
cagaaagaggaaactgagagtggtagtggaccaaaatcttctagaaacacattggaagct
gcgctcgattctattcgctacattacaagacacatcatgaaggaaaatgatgtccgtgag
gttgttgaagattggaaattcatagcccaggttcttgatcggatgtttctgtggactttt
cttttcgtttcaattgttggatctcttgggctttttgttcctgttatttataaatgggca
aatatattaataccagttcatattggaaatgcaaataagtga

>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_4|567_aa
MGSGPLSLPLALSPPRLLLLLLLSLLPVARASEAEHRLFERLFEDYNEIIRPVANVSDPV
IIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPD
IVLYNKQDPQLQVCWSLLEVHSRPCLPGYQQRWLQNSGGCRTVDLGDPQMLLPDRSSGSF
VSEEYPAVAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFG
SWSYDKAKIDLVLIGSSMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIR
RLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTS
LVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTR
PTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKEGYPCQDGMCGYCHHRRIKISNFSAN
LTRSSSSESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRI
FLWVFTLVCILGTAGLFLQPLMAREDA

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_4|1704_bp
atgggctctggcccgctctcgctgcccctggcgctgtcgccgccgcggctgctgctgctg
ctgctgctgtctctgctgccagtggccagggcctcagaggctgagcaccgtctatttgag
cggctgtttgaagattacaatgagatcatccggcctgtagccaacgtgtctgacccagtc
atcatccatttcgaggtgtccatgtctcagctggtgaaggtggatgaagtaaaccagatc
atggagaccaacctgtggctcaagcaaatctggaatgactacaagctgaaatggaacccc
tctgactatggtggggcagagttcatgcgtgtccctgcacagaagatctggaagccagac
attgtgctgtataacaaacaggaccctcagctgcaggtctgttggagtttgctagaggtc
cactccagaccctgtttgcctgggtatcagcagcggtggctgcagaacagcggtggctgt
agaacagtggatcttggtgacccacagatgctgctgcctgatcgttcctctggaagtttt
gtatcagaggagtacccggccgttgctgttggggatttccaggtggacgacaagaccaaa
gccttactcaagtacactggggaggtgacttggatacctccggccatctttaagagctcc
tgtaaaatcgacgtgacctacttcccgtttgattaccaaaactgtaccatgaagttcggt
tcctggtcctacgataaggcgaaaatcgatctggtcctgatcggctcttccatgaacctc
aaggactattgggagagcggcgagtgggccatcatcaaagccccaggctacaaacacgac
atcaagtacaactgctgcgaggagatctaccccgacatcacatactcgctgtacatccgg
cgcctgcccttgttctacaccatcaacctcatcatcccctgcctgctcatctccttcctc
actgtgctcgtcttctacctgccctccgactgcggtgagaaggtgaccctgtgcatttct
gtcctcctctccctgacggtgtttctcctggtgatcactgagaccatcccttccacctcg
ctggtcatccccctgattggagagtacctcctgttcaccatgatttttgtaaccttgtcc
atcgtcatcaccgtcttcgtgctcaacgtgcactacagaaccccgacgacacacacaatg
ccctcatgggtgaagactgtattcttgaacctgctccccagggtcatgttcatgaccagg
ccaacaagcaacgagggcaacgctcagaagccgaggcccctctacggtgccgagctctca
aatctgaattgcttcagccgcgcagagtccaaaggctgcaaggagggctacccctgccag
gacgggatgtgtggttactgccaccaccgcaggataaaaatctccaatttcagtgctaac
ctcacgagaagctctagttctgaatctgttgatgctgtgctgtccctctctgctttgtca
ccagaaatcaaagaagccatccaaagtgtcaagtatattgctgaaaatatgaaagcacaa
aatgaagccaaagagattcaagatgattggaagtatgttgccatggtgattgatcgtatt
tttctgtgggttttcaccctggtgtgcattctagggacagcaggattgtttctgcaaccc
ctgatggccagggaagatgcataa

>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_5|532_aa
MRRAPSLVLFFLVALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQL
SLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLPDIVLYNN
ADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTE
IDMVLMTPTASMDDFTPSGEWDIVALPGRRTVNPQDPSYVDVTYDFIIKRKPLFYTINLI
IPCVLTTLLAILVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDVPLIGKYLM
FTMVLVTFSIVTSVCVLNVHHRSPSTHTMAPWVKRCFLHKLPTFLFMKRPGPDSSPARAF
PPSKSCVTKPEATATSTSPSNFYGNSMYFVNPASAASKSPAGSTPVAIPRDFWLRSSGRF
RQDVQEALEGVSFIAQHMKNDDEDQSFLDQQHRHRLRAYRKCRVSGPNPDLLAPNLHFNQ
VVEDWKYVAMVVDRLFLWVFMFVCVLGTVGLFLPPLFQTHAASEGPYAAQRD

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_5|1599_bp
atgaggcgcgcgccttccctggtccttttcttcctggtcgccctttgcgggcgcgggaac
tgccgcgtggccaatgcggaggaaaagctgatggacgaccttctgaacaaaacccgttac
aataacctgatccgcccagccaccagctcctcacagctcatctccatcaagctgcagctc
tccctggcccagcttatcagcgtgaatgagcgagagcagatcatgaccaccaatgtctgg
ctgaaacaggaatggactgattaccgcctgacctggaacagctcccgctacgagggtgtg
aacatcctgaggatccctgcaaagcgcatctggttgcctgacatcgtgctttacaacaac
gccgacgggacctatgaggtgtctgtctacaccaacttgatagtccggtccaacggcagc
gtcctgtggctgccccctgccatctacaagagcgcctgcaagattgaggtgaagtacttt
cccttcgaccagcagaactgcaccctcaagttccgctcctggacctatgaccacacggag
atagacatggtcctcatgacgcccacagccagcatggatgactttactcccagtggtgag
tgggacatagtggccctcccagggagaaggacagtgaacccacaagaccccagctacgtg
gacgtgacttacgacttcatcatcaagcgcaagcctctgttctacaccatcaacctcatc
atcccctgcgtgctcaccaccttgctggccatcctcgtcttctacctgccatccgactgc
ggcgagaagatgacactgtgcatctcagtgctgctggcactgacattcttcctgctgctc
atctccaagatcgtgccacccacctccctcgatgtgcctctcatcggcaagtacctcatg
ttcaccatggtgctggtcaccttctccatcgtcaccagcgtctgtgtgctcaatgtgcac
caccgctcgcccagcacccacaccatggcaccctgggtcaagcgctgcttcctgcacaag
ctgcctaccttcctcttcatgaagcgccctggccccgacagcagcccggccagagccttc
ccgcccagcaagtcatgcgtgaccaagcccgaggccaccgccacctccaccagcccctcc
aacttctatgggaactccatgtactttgtgaaccccgcctctgcagcttccaagtctcca
gccggctctaccccggtggctatccccagggatttctggctgcggtcctctgggaggttc
cgacaggatgtgcaggaggcattagaaggtgtcagcttcatcgcccagcacatgaagaat
gacgatgaagaccagagtttcttggaccagcagcaccggcatcgcctgcgagcttatcgg
aaatgcagagtctcaggccccaatccagacctgctagctccaaacctgcattttaaccag
gtcgttgaggactggaagtacgtggctatggtggtggaccggctgttcctgtgggtgttc
atgtttgtgtgcgtcctgggcactgtggggctcttcctaccgcccctcttccagacccat
gcagcttctgaggggccctacgctgcccagcgtgactga

>gi568815583r:78496607_78718918|GENSCAN_predicted_peptide_6|317_aa
MAPTKRDTDPRGVAEEVEQLSPTLQRTPVLGPLEHTAWEMIRKMKLPGRENKMAVVLGTI
MDDVRVQEVLNLKGGAGGKILTFDQLALDSPKGSSTIPLFGSLKGQEVYRHFGKAPGTPH
SHTKAYVRSKGRKFKRARGVSIENTSNKGNRRKSDPIRADLKINICPYVEHPAMLPQFSL
SIRLSQQRAKTLVQSIRLLLSLLGGLNISAVVTVTKGKKNTQQVFRQHCQPLPGCQWTAG
EPASGGTTKGKALERSLGSCALQSSHICGSAQNAYGRLRVSAGHMVSSRGEELDSGQSED
KLAFASTTTSVTAETKG

>gi568815583r:78496607_78718918|GENSCAN_predicted_CDS_6|954_bp
atggcacccacaaagagggacactgacccccggggtgtggcagaggaggtggaacagctg
agccccacacttcagagaacccctgtcctgggcccactggagcacacagcatgggagatg
atccggaagatgaagcttcctggccgggaaaacaaaatggccgtggtcttggggaccata
atggatgatgtgcgggttcaggaggttctcaacctgaagggcggggcagggggcaagatc
ctcacttttgaccagctggccctggactcccccaagggcagcagcaccattccgctcttt
ggttctctcaagggccaagaggtgtaccggcatttcggcaaggccccaggaacgccgcac
agccacaccaaagcctacgtccgctccaagggccggaagttcaagcgcgccagaggtgtc
tccattgaaaatacttccaacaaaggaaacagaaggaaatcagaccccatcagggcagac
ttaaaaatcaacatctgcccttacgtggagcacccagcaatgttacctcaattctctttg
agtattaggctttcccagcaacgtgccaaaaccctggtacagagcattaggcttcttctc
tccctgctaggaggtttgaatatctctgcagtggtcacagtcacaaaagggaagaaaaac
acccagcaggttttccgccagcactgccagcctttgcctggctgtcagtggacagctggg
gagccagcttctggtgggaccaccaagggcaaggccctggagaggtctctgggcagctgt
gccttgcagagctcccacatctgtggatctgcacaaaatgcctatggtagacttagggtc
agtgcaggtcatatggtcagcagtcggggagaagagctggactcagggcagagtgaggac
aagctggcatttgccagcaccactacatctgtcactgctgaaaccaaggggtga