GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:21:25

Sequence gi568815583f:33962718_34164313 : 201596 bp : 40.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   5785   5556  230  1  2   48   75   219 0.452  14.49
 1.00 Prom -  18341  18302   40                              -3.95

 2.00 Prom +  20357  20396   40                              -7.55
 2.01 Sngl +  34025  34345  321  1  0   88   38   212 0.974  11.94
 2.02 PlyA +  37190  37195    6                               1.05

 3.04 PlyA -  37486  37481    6                               1.05
 3.03 Term -  39061  38982   80  2  2   61   37    73 0.716  -3.55
 3.02 Intr -  40492  40315  178  1  1   76   80   188 0.925  15.37
 3.01 Init -  44353  44330   24  1  0   52   80    54 0.891   0.58
 3.00 Prom -  45959  45920   40                              -4.25

 4.00 Prom +  55267  55306   40                              -5.05
 4.01 Init +  55481  55619  139  1  1   53   66   152 0.687   9.85
 4.02 Intr +  55726  55851  126  2  0   34   89    69 0.308   1.33
 4.03 Term +  60668  60792  125  0  2   57   44    71 0.217  -2.83
 4.04 PlyA +  60901  60906    6                               1.05

 5.03 PlyA -  61188  61183    6                               1.05
 5.02 Term -  66148  66122   27  1  0  135   45    18 0.321  -0.70
 5.01 Init -  76329  76063  267  0  0   64  111   200 0.615  14.94
 5.00 Prom -  88651  88612   40                              -6.05

 6.00 Prom +  99220  99259   40                              -6.45
 6.01 Sngl + 100001 101599 1599  1  0   73   48  1478 0.999 137.38
 6.02 PlyA + 102349 102354    6                               1.05

 7.08 PlyA - 102466 102461    6                               1.05
 7.07 Term - 103595 103343  253  1  1   62   50   205 0.033   8.23
 7.06 Intr - 121769 121621  149  2  2  104   51   152 0.109  11.21
 7.05 Intr - 123501 123208  294  0  0   -1   51   234 0.628   7.08
 7.04 Intr - 125416 125336   81  1  0  111   94    47 0.960   6.52
 7.03 Intr - 127738 127600  139  0  1   67   80    29 0.931  -0.45
 7.02 Intr - 133297 133178  120  0  0   78   78   121 0.932   8.79
 7.01 Init - 139212 138887  326  0  2   72   52   357 0.881  25.35
 7.00 Prom - 139758 139719   40                             -10.35

 8.00 Prom + 139760 139799   40                             -18.07
 8.01 Sngl + 139815 141572 1758  2  0   47   36  1289 0.967 114.02
 8.02 PlyA + 142990 142995    6                               1.05

 9.07 PlyA - 143055 143050    6                               1.05
 9.06 Term - 152621 152478  144  2  0   40   43   136 0.050   1.23
 9.05 Intr - 171997 171872  126  1  0  100  116   -13 0.489   2.66
 9.04 Intr - 182774 182681   94  1  1  116   84    17 0.797   3.15
 9.03 Intr - 186033 185915  119  0  2   78  107     3 0.679  -0.46
 9.02 Intr - 190352 190073  280  1  1   61  107   189 0.848  14.66
 9.01 Init - 191278 191268   11  1  2   60   86    -8 0.714  -3.82
 9.00 Prom - 191344 191305   40                              -5.25

10.02 PlyA - 191785 191780    6                               1.05
10.01 Sngl - 192997 192530  468  1  0   62   38   307 0.330  18.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 103642 103343  300  1  0  103   50   197 0.951  12.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_1|77_aa
MNEELIGAIQTRQQTDGMTLPYIKNSLITSPAGQQYILKGRKKGADDDIRFDRCSLFEQL
VIEKRIQEKLQLQSVIS

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_1|231_bp
atgaatgaagagctgataggagctattcaaaccagacagcaaactgatgggatgacgctg
ccatacataaaaaactcattaattacttcccctgctggacagcagtatatcctgaaagga
agaaagaaaggagcagatgatgatattcgttttgataggtgttctctgtttgaacagctt
gtcattgagaagagaatccaggaaaagctgcagcttcagagtgtgatcagn

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_2|106_aa
MGRNQSRKAENSKNQSASCPPKERSSSLAREQSWMENDFDELTEVGFGRLVITNFSQLKE
AVRTHRKEAKKLEKRLDEWLTRINSVEKTLNYPMGLKTMAQECSKQ

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_2|321_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaaccagagcgcctcttgtcct
ccaaaggaacgcagctcctcgctagcaagagaacaaagctggatggagaatgactttgat
gagctgacagaagtaggcttcggaaggctggtaataacaaacttctcccagctaaaggag
gctgttcgaacccatcgcaaggaagctaaaaagcttgaaaaaagattagatgaatggcta
actagaataaacagcgtagagaagaccttaaattacccgatggggctgaaaaccatggca
caagaatgtagcaaacaataa

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_3|93_aa
MQPVTDVQVEDDSDAETYGEENDEQGNYSKRKIVSNWDRYQDIEKEVNNESGESQRGTDF
SVLLSSAECAFPSRKEVDHKIVSQEHRIRHYRR

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_3|282_bp
atgcaaccagtgaccgatgtccaggttgaagatgacagcgatgcagagacctatggagaa
gagaatgatgaacagggaaattattctaaaagaaagattgtctctaactgggatcgatat
caagatattgaaaaagaggtcaataatgaaagtggagagtcacagaggggaacagatttc
agtgtcctccttagctctgcagaatgtgcttttccgagcaggaaagaagtagatcataaa
attgtgagtcaggagcacaggattcgtcattaccgtagatga

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_4|129_aa
MHFADPKVLPVVQDVEVEDSDIVSGIYSFLWVLGLTNFKNEAADRREVKPHTFAVSVTVF
KGSASRVVCFSRWVRGLADFRNEAADPRVILVTVVAAASLLATSHNDSRYTPELRRSPPL
TFLLMMLSG

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_4|390_bp
atgcattttgctgaccctaaagtccttccagtggtacaagatgtggaggtggaagacagt
gatattgtgtccggaatttattccttcttgtgggttctcggtctcactaacttcaagaat
gaagccgcagaccgtcgcgaagtgaagccacataccttcgcagtgagtgttacagttttt
aaaggtagtgcgtccagagttgtttgtttctcccggtgggttcgtggtctcgctgacttc
aggaatgaagccgcagaccctcgtgtaatcttagtaacagttgttgcggcagcatctctc
ttggccacatcacataatgatagccgatacacaccagagctcaggcgcagcccacctctc
accttcctcttgatgatgctgtcagggtag

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_5|97_aa
MQAERGARGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFR
GARGGRGGGGAPRGSRREPGGWGAGASAPVKVQCGGR

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_5|294_bp
atgcaggcggagcgaggagctcggggaggccgtgggcggcggccaggccgcggccggcct
ggcggagatcgccacagcgagcggcccggagccgcagcggcggtagccagaggcggcggc
ggaggcggcggcggggacggaggcggacgccggggccgtggccgtggccggggcttccgc
ggcgctcgcggaggccgaggaggaggaggcgccccgcgaggcagccgccgggagccggga
ggctggggcgcaggggccagcgcgccggtgaaggtacaatgtggtggccgatga

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_6|532_aa
MEGDSYHNATTVNGTPVNHQPLERHRLWEVITIAAVTAVVSLITIVGNVLVMISFKVNSQ
LKTVNNYYLLSLACADLIIGIFSMNLYTTYILMGRWALGSLACDLWLALDYVASNASVMN
LLVISFDRYFSITRPLTYRAKRTPKRAGIMIGLAWLISFILWAPAILCWQYLVGKRTVPL
DECQIQFLSEPTITFGTAIAAFYIPVSVMTILYCRIYRETEKRTKDLADLQGSDSVTKAE
KRKPAHRALFRSCLRCPRPTLAQRERNQASWSSSRRSTSTTGKPSQATGPSANWAKAEQL
TTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEFSAEETEETFVKAETEKSDYDTPN
YLLSPAAAHRPKSQKCVAYKFRLVVKADGNQETNNGCHKVKIMPCPFPVAKEPSTKGLNP
NPSHQMTKRKRVVLVKERKAAQTLSAILLAFIITWTPYNIMVLVSTFCDKCVPVTLWHLG
YWLCYVNSTVNPICYALCNRTFRKTFKMLLLCRWKKKKVEEKLYWQGNSKLP

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_6|1599_bp
atggaaggggattcttaccacaatgcaaccaccgtcaatggcaccccagtaaatcaccag
cctttggaacgccacaggttgtgggaagtcatcaccattgcagctgtgactgctgtggta
agcctgatcaccattgtgggcaatgtcttggtcatgatctccttcaaagtcaacagccag
ctcaagacagttaacaactattacctgctcagcttagcctgtgcagatctcatcattgga
atcttctccatgaacctctacaccacctacatcctcatgggacgctgggctctcgggagt
ctggcttgtgacctttggcttgcactggactacgtggccagcaacgcttctgtcatgaac
cttctggtgatcagttttgaccgttacttttccatcacaagacccttgacatatcgggcc
aagcgtactccgaaaagggctggcatcatgattggcttggcctggctgatctccttcatc
ctctgggccccagcaatcctctgctggcagtacttggttgggaagcggacagttccactg
gatgagtgccagatccagtttctctctgagcccaccatcacttttggcactgccattgct
gccttctacatccctgtttctgtcatgaccatcctctactgtcgaatctaccgggaaaca
gagaagcgaaccaaggacctggctgacctccagggttctgactctgtgaccaaagctgag
aagagaaagccagctcatagggctctgttcagatcctgcttgcgctgtcctcgacccacc
ctggcccagcgggaaaggaaccaggcctcctggtcatcctcccgcaggagcacctccacc
actgggaagccatcccaagccactggcccaagcgccaattgggccaaagctgagcagctc
accacctgtagcagctacccttcctcagaggatgaggacaagcccgccactgaccctgtc
ctccaagtggtctacaagagtcagggtaaggaaagcccaggggaagaattcagtgctgaa
gagactgaggaaacttttgtgaaagctgaaactgaaaaaagtgactatgacaccccaaac
taccttctgtctccagcagctgctcatagacccaagagtcagaaatgtgtggcctataag
ttccgattggtggtaaaagctgacgggaaccaggagaccaacaatggctgtcacaaggtg
aaaatcatgccctgccccttcccagtggccaaggaaccttcaacgaaaggcctcaatccc
aaccccagccatcaaatgaccaaacgaaagagagtggtcctagtcaaagagaggaaagca
gcccagacactgagtgccattctcctggccttcatcatcacatggaccccgtataacatc
atggtcctggtttctaccttctgtgacaagtgtgtcccagtcaccctgtggcacttgggc
tattggttgtgctatgtcaatagcactgtcaaccccatctgctatgccctctgcaacaga
accttcaggaagacctttaagatgctgcttctctgccgatggaaaaagaaaaaagtggaa
gagaagttgtactggcaggggaacagcaagctaccctga

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_7|453_aa
MTTSSRQRRRWRPGDWEGFRGCRSECRAAVMAAALWGFFPVLLLLLLSGDVQSSEVPGAA
AEGSGGSGVGIGDRFKIEGRAVVPGVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIP
SGSYVVEVVSPAYRFDPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFI
KRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDPDMRRLNWQKPRGVDNSVRRRFK
GQILIPNIGYGSSKETKYLLPSGFWKFLVYNIKELEVLLICNKCYRAEITHSVSSKNHKT
IWKEQPSWPSQSLVPMPGSTEMEQSMNMLNSNHELPDVSEFMTRLFSSKSSGKSSSGSSK
TGKSGAGKRRNQSLKRRLNCLSGAGRAGLLMKSHPVGITEARKPLCWRTEPITVPTEFFA
GVNLPFTKAQQMHCLQDVSCQREVFIRDQSRPA

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_7|1362_bp
atgacaacatcaagccgccagcggcggcggtggcggccgggagactgggagggcttccgg
ggctgccggtctgagtgcagagctgctgtcatggcggccgctctgtggggcttctttccc
gtcctgctgctgctgctgctatcgggggatgtccagagctcggaggtgcccggggctgct
gctgagggatcgggagggagtggggtcggcataggagatcgcttcaagattgaggggcgt
gcagttgttccaggggtgaagcctcaggactggatctcggcggcccgagtgctggtagac
ggagaagagcacgtcggtttccttaagacagatgggagttttgtggttcatgatatacct
tctggatcttatgtagtggaagttgtatctccagcttacagatttgatcccgttcgagtg
gatatcacttcgaaaggaaaaatgagagcaagatatgtgaattacatcaaaacatcagag
gttgtcagactgccctatcctctccaaatgaaatcttcaggtccaccttcttactttatt
aaaagggaatcgtggggctggacagactttctaatgaacccaatggttatgatgatggtt
cttcctttattgatatttgtgcttctgcctaaagtggtcaacacaagtgatcctgacatg
agacggcttaactggcagaaacctagaggtgttgacaacagtgttcgtagaagattcaag
ggccagatcttgatccccaacattggttatgggagcagcaaagaaacaaagtacttacta
cccagtggcttctggaagttcctggtctacaacatcaaggagctggaagtactgctgatc
tgcaacaaatgttaccgtgctgagattactcacagtgtttcctccaagaaccacaaaacc
atctggaaagagcagcccagctggccatcacagtcactagtcccaatgccaggctccaca
gaaatggagcagtcaatgaatatgctgaattccaaccatgagttgcctgatgtttctgag
ttcatgacaagactcttctcttcaaaatcatctggcaaatctagcagcggcagcagtaaa
acaggcaaaagtggggctggcaaaaggaggaatcaaagccttaaacgaagactcaactgt
ttatctggcgctggtagagcaggtttgctcatgaagtcacacccagttggcatcacggag
gcccgaaagcctctgtgctggagaactgagccaattactgttcccaccgaattctttgca
ggtgtcaacctgccctttacaaaggctcagcagatgcactgcttacaagatgtttcatgt
caacgtgaagtctttataagggaccagtcccgtcctgcctga

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_8|585_aa
MSNPRKRSIPMRDSNTGLEQLLAEDSFDESDFSEIDDSDNFSDSALEADKIRPLSHLESD
GKSSTSSDSGRSMKWSARAMIPRQRYDFTGTPGRKVDVSDITDPLQYFELFFTEELVSKI
TRETNAQAALLASKPPGPKGFSRMDKWKDTDNDELKVFFAVMLLQGIVQKPELEMFWSTR
PLLDTPYLRQIMTGERFLLLFRCLHFVNNSSISAGQSKAQISLQKIKPVFDFLVNKFSTV
YTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQSGYVWNALVHTGPGMN
LKDSADGLKSSRIVLTLVNDLLGQGYCVFLDNFNISPMLFRELHQNRTDAVGTARLNRKQ
IPNDLKKRIAKGTTVARFCGELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTKRPRV
IVDYNENMGAVDSADQMLTSYPSERKRHKVWYKKFFHHLLHITVLNSYILFKKDNPEHTM
SHINFRLALIERMLEKHHKPGQQHLRGRPCSDDVTPLRLSGRHFPKSIPATSGKQNPTGR
CKICCSQYDKDGKKIRKETRYFCAECDVPLCVVPCFEIYHTKKNY

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_8|1758_bp
atgtcaaatcctagaaaacgtagcattcctatgcgtgatagtaataccggtctcgaacag
ttgttggctgaagattcatttgatgaatctgatttttcggaaatagatgattctgataat
ttttcggatagtgctttagaagccgataagatcaggcctctgtcccatttagaatctgat
ggaaagagctctacatcaagtgactcagggcgctccatgaaatggtcagctcgtgctatg
attccacgtcaaaggtatgactttaccggcacacctggcagaaaagtcgatgtcagtgat
atcactgacccattgcagtattttgaactgttctttactgaggaattagtttcaaaaatt
actagagaaacaaatgcccaagctgccttgttggcttcaaagccaccgggtccgaaagga
ttttcgcgaatggataaatggaaagacactgacaatgacgagctcaaagtcttttttgca
gtaatgttactgcaaggtattgtgcagaaacctgagctggagatgttttggtcaacaagg
cctcttttggatacaccttatctcaggcaaattatgactggtgaaagatttttacttttg
tttcggtgcctgcattttgtcaacaattcttctatatctgctggtcaatcaaaggcccag
atttcattgcagaagatcaaacctgtgttcgactttcttgtaaataaattttccactgta
tatactccaaacagaaacattgcagttgatgaatcactgatgctgttcaaggggccatta
gctatgaagcagtacctcccgacaaaacgagtacgatttggtctgaagctatatgtactt
tgtgaaagtcagtctggttatgtgtggaatgcgcttgttcacacagggcctggcatgaat
ttgaaagattcagcggatggcctgaaatcatcacgcattgttcttaccttggtcaatgac
cttcttggccaagggtattgtgtcttcctcgataactttaatatatctcccatgcttttc
agagaattacatcaaaataggactgatgcagttgggacagctcgtttgaacagaaaacag
attccaaatgatctgaaaaaaaggattgcaaaggggacgactgtagccagattctgtggt
gaacttatggcactgaaatggtgtgacggcaaggaggtgacaatgttgtcaacattccac
aatgatactgtgattgaagtaaacaatagaaatggaaagaaaactaaaaggccacgtgtc
attgtggattataacgagaatatgggagcagtggactcggctgatcaaatgcttacttct
tatccatctgagcgcaaaagacacaaggtttggtataagaaattctttcaccatcttcta
cacattacagtgctgaactcctacatcctgttcaagaaggataatcctgagcacacgatg
agccatataaacttcagactggcattgattgaaagaatgctggaaaagcatcacaagcca
gggcagcaacatcttcgaggtcgtccttgctccgatgatgtcacacctcttcgtctgtct
ggaagacatttccccaagagcataccagcaacgtccgggaaacagaatccaactggtcgc
tgcaaaatttgctgctcccaatacgacaaggatggcaagaagatccggaaagaaacgcgc
tatttttgtgccgaatgtgatgttccgctttgtgttgttccgtgctttgaaatttaccac
acgaaaaaaaattattaa

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_9|257_aa
MGFGTVGQTVKSPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGH
LPEKLHHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVAL
TFWRKRSISELVAYLLRNIQILKQQLSGLWEQENHLTLVPGYTGNIAKMINTGIELPGTW
CVIKCQLVEVVRLSIINRLLAICSLMLSAKPTLLKPLLDGAHEQRSVGTSRSLQRQWEQT
LFTRVCNHVPPLAGGSA

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_9|774_bp
atgggttttggaacagttggacaaactgtgaaaagcccagataaacttcgtaaagtgatc
tatcgcagaaagaaagttcatcatccctttccaaatccttgttacagaaaaaaacagtcc
cctggaagtgggggctgtgacatggcaaataaagaaaatgaactggcttgtgcaggccac
ctgcctgaaaaattacaccatgatagtcgaacatatttggttaactccagtgattctggt
tcttcacagacagaaagcccatcatcaaaatatagtgggtttttttctgaggtttctcag
gaccatgaaacaatggcccaagttttgttcagcaggaatatgagattgaatgtagcttta
actttctggagaaagagaagtataagtgaacttgtagcttatttgttgagaaatattcaa
attttaaaacaacaattaagtggattatgggaacaggaaaaccatcttactttggttcca
ggatatactggtaatatagctaagatgataaacacaggcattgagctgccaggtacttgg
tgtgtaataaaatgtcaactggttgaggtagtgaggctctccataataaacagattactt
gctatatgctcgttaatgttaagtgcaaagcccactctgctcaagcccttgctggatgga
gcacatgagcaaaggagtgtgggaaccagccggtcacttcagcgccagtgggagcaaact
ctgttcactagggtttgcaaccatgttccaccccttgctggagggagtgcatag

>gi568815583f:33962718_34164313|GENSCAN_predicted_peptide_10|155_aa
MAWENRMALDMILAEKGEVCIMIKTQCCTFIPNNTAPDESITKALQGLTALSNELAKNSG
VNDPFTGWLEKWFGKWKGITATILTSLAIVAVVLILVGCCIIPRIRGLVQRHTETALTKT
SLSSPPPYSDKLFLLENQAEQLCQDMLKKFEEEDL

>gi568815583f:33962718_34164313|GENSCAN_predicted_CDS_10|468_bp
atggcttgggaaaatagaatggccttagacatgattttagcagaaaaaggggaagtttgc
atcatgattaaaactcagtgttgtaccttcatcccaaacaataccgcccctgatgaaagt
ataacaaaggcattgcaaggtctaactgctctgtccaatgagttagcaaaaaactcagga
gtaaatgaccccttcacagggtggctagaaaaatggtttggtaaatggaaagggatcaca
gccaccatccttacttctcttgcaattgtagcagtagtgcttatccttgttggatgctgc
atcatacctcgcatccgtgggctagtccaaagacatacagaaacagcccttactaaaact
tctctcagttcccctccaccatattctgacaagctctttcttttagaaaaccaagcagaa
cagctatgccaagacatgttaaagaaatttgaagaggaagacctgtaa