GENSCAN 1.0	Date run:  3-Oct-119	Time: 17:24:16

Sequence gi568815584r:100046764_100259587 : 212824 bp : 49.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2888   2927   40                              -3.26
 1.01 Init +  18738  18748   11  2  2   98  113     3 0.022   3.93
 1.02 Intr +  37924  38092  169  1  1   89   82   206 0.651  20.05
 1.03 Intr +  50718  50895  178  2  1  121  107   218 0.994  26.49
 1.04 Intr +  60177  60345  169  1  1   76   84    44 0.284   1.80
 1.05 Intr +  61796  61862   67  2  1  133   29    36 0.503   1.11
 1.06 Intr +  71141  71236   96  1  0   72  115    19 0.407   3.21
 1.07 Intr +  72247  72305   59  0  2   95   77    58 0.476   3.08
 1.08 Intr +  73471  73511   41  1  2   51   96    13 0.275  -3.73
 1.09 Intr +  76776  76839   64  1  1  132   86    72 0.986   9.18
 1.10 Intr +  78022  78106   85  1  1  100   29    71 0.872   2.22
 1.11 Intr +  79797  80008  212  2  2   67   94    79 0.893   4.11
 1.12 Intr +  80054  80428  375  2  0   63   28   154 0.214   1.03
 1.13 Intr +  81814  81985  172  1  1   38   94    91 0.417   4.65
 1.14 Intr +  82800  82921  122  2  2   82   90   107 0.889   9.59
 1.15 Intr +  84701  84828  128  2  2   53   60    61 0.575   0.12
 1.16 Intr +  85747  85866  120  2  0   71   84    50 0.076   3.37
 1.17 Intr +  88002  88104  103  1  1   45   59    73 0.033  -0.67
 1.18 Intr +  89142  89205   64  0  1  116   94    25 0.774   4.62
 1.19 Intr +  89961  90056   96  2  0   91   81    52 0.840   5.01
 1.20 Intr +  90563  90615   53  1  2   30   71    33 0.077  -6.49
 1.21 Intr +  94417  94483   67  1  1  100   99   146 0.431  15.81
 1.22 Intr +  94973  95030   58  1  1  108  113   112 0.183  14.16
 1.23 Term +  97022  97098   77  0  2   33   47    88 0.017  -2.80
 1.24 PlyA +  97452  97457    6                               1.05

 2.09 PlyA -  99679  99674    6                              -1.95
 2.08 Term - 100144  99998  147  1  0  119   52   194 0.052  16.80
 2.07 Intr - 102947 102205  743  0  2  124   84  1725 0.979 166.87
 2.06 Intr - 104764 104711   54  2  0   86   94    23 0.674   1.65
 2.05 Intr - 112906 112743  164  0  2   46   80   206 0.475  15.22
 2.04 Intr - 114012 113827  186  2  0   88   36   110 0.238   4.60
 2.03 Intr - 119934 119842   93  2  0  110  107    50 0.514   8.18
 2.02 Intr - 131696 131534  163  0  1   89   75    72 0.051   5.03
 2.01 Init - 145681 145672   10  1  1  104   79     0 0.038   1.52
 2.00 Prom - 156356 156317   40                              -6.76

 3.00 Prom + 156621 156660   40                              -2.56
 3.01 Init + 161532 161854  323  2  2   78   52   197 0.098  10.00
 3.02 Intr + 167466 167797  332  0  2   72   40   139 0.005   2.77
 3.03 Intr + 191666 191945  280  0  1  112   -4   181 0.771   7.84
 3.04 Intr + 192436 193160  725  1  2   87   99  1694 0.940 161.48
 3.05 Term + 193803 193975  173  1  2   82   40   147 0.977   7.29
 3.06 PlyA + 194111 194116    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  27851  27754   98  2  2  103  107    63 0.906   9.48
S.002 Intr +  94973  95065   93  1  0  108   64   136 0.811  13.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:100046764_100259587|GENSCAN_predicted_peptide_1|861_aa
MATSEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASNTFRVVGVKLQDQQ
VVINYSIVKGLKYNQATPTFHQWRDARQVYGLNFASKEEATTFSNAMLFALNIMNSQEGV
PGSVVGAAWSSRKSACPGAGLRWVCVTLSKSPPPSAGGMTPQARGSSHDTKMPGAWAPDV
VSGRAFVRLHANSYPSRTARPVAGDAQFAWGQSSTYLTNMYCIDYRSKTMLFVFREEVSQ
GTYGPSCYQCQFSMTPSPELFPKGPSSQRQVQNGPSPDEMDIQRSAEFCTPGPNPSCVGS
LAVREWAYRLAVGWRQPWHTVALVERWRNLTLKPGPAGTAQAQSVVVSRVEESDCPAVIT
FQTSDGAAPAAASGISRKKNLGHRWQPLHVDEAQGHTGRSVSSYGEPRSQSATTTSDGEG
SKRAEQRLGESAQLGLATTCQPSPEWTFSKHLLCLRHRAKGWGHNYDCRCSSCPQEARCP
LKETVNPPLSCHVVNTVASDVQVLKAYLGGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQ
GSSHDESSMSGLAAAIAGAKLRRVQRPEDASGGSSPSGTSKSDANRASSGGGGGGLMEEM
NKLLAKRLSPASEGMQLSLPTVEGRREMNVDRKLLFSSTFTDTHPAYTPRHDHTEGLDIC
LGLAPHQTGPRQAASFTPSFSHTGLSEDRELALGQWSYCSEDQFHHLKTCTQAWPPHRLC
DCQRKILVPPPLRGPEQPASHLTPQIFAWCLDLPGCIGSWLMNVINTPALFASSNSPAHI
PERPGTVKGSEPDHRMKPAGSVNDMALDAFDLDRMKQEILEEVVRELHKVKEEIIDEDSQ
KPSQPQTPVHQSTHRSLGALL

>gi568815584r:100046764_100259587|GENSCAN_predicted_CDS_1|2586_bp
atggccacaagtgaacagagtatctgccaagcccgggcttccgtgatggtctacgatgac
accagtaagaaatgggtaccaatcaaacctggccagcagggattcagccggatcaacatc
taccacaacactgccagcaacaccttcagagtcgttggagtcaagttgcaggatcagcag
gttgtgatcaattattcaatcgtgaaagggctgaagtacaatcaggccacgccaaccttc
caccagtggcgagatgcccgccaggtctacggcttaaactttgcaagtaaagaagaggca
accacgttctccaatgcaatgctgtttgccctgaacatcatgaattcccaagaaggagtg
cctggaagtgtggtgggagcagcttggtctagcaggaagagtgcatgtcctggagccggg
ctacgttgggtctgtgtgaccctgagcaagtcacctcctccatcagcaggtggaatgaca
ccacaggcccgtggcagttcacatgacacgaagatgcccggtgcctgggctccagatgtt
gtatcaggcagggcctttgtacgcctccatgccaacagctacccaagtcgcaccgctcgc
ccagtggctggagatgctcagtttgcctggggccagtcatccacgtacttaacaaatatg
tattgcattgactataggtcaaaaactatgctctttgtgttcagagaagaggtcagccag
ggaacctatggcccgtcctgctaccagtgtcagttcagcatgactccttcacctgaactt
ttccccaagggcccctccagccagcgtcaggtgcagaatggcccctctcctgatgagatg
gacatccagagaagtgctgaattctgtaccccagggcccaatccaagctgtgtggggtca
ctggccgtccgggaatgggcataccgcctggcggtcgggtggaggcagccgtggcacaca
gtggcgcttgtggagcgctggcgaaacctgactctgaagccggggccggcgggtacagca
caggcacagagtgtggtggtctccagagtggaggagtcagactgccctgctgtgattact
ttccagacaagtgatggagcagcaccagcagcagcgtcaggaatctctagaaagaagaac
ctcggccacaggtggcagcccctccacgtagatgaggcccagggacacacggggcgctct
gtgagcagctatggggagcctaggtctcaaagtgcaaccaccacttcagatggtgagggt
agcaagagagcagagcagaggcttggggagtctgctcagctgggtctggccactacctgc
caaccttctccggagtggacattcagcaagcacctcctgtgtctcaggcaccgtgctaag
ggctggggacacaactatgactgcagatgcagttcctgccctcaggaagcccgctgtcca
ctcaaggagacagtgaacccacccttgtcatgtcacgtagtgaacactgtggcaagtgac
gtgcaggtgctgaaggcctaccttggtgggcctccaccgccccccccacccccagtccca
cctccacccactggggctaccccacctcccccacccccactgccagccggaggagcccag
gggtccagccacgacgagagctccatgtcaggactggccgctgccatagctggggccaag
ctgagaagagtccaacggccagaagacgcatctggaggctccagtcccagtgggacctca
aagtccgatgccaaccgggcaagcagcgggggtggcggaggaggcctcatggaggaaatg
aacaaactgctggccaagaggttgtctcccgcctctgagggcatgcagttgagtctccca
acagtggagggcaggagggaaatgaacgtggacagaaagctcctgttcagcagcactttc
acagacactcatcccgcctacactccccgccatgaccacacggagggcctggacatttgc
ctgggcctggctcctcaccagacggggcctagacaagccgcctccttcacgccatcgttt
tcccacacaggtttatctgaggaccgggagctggccctgggccaatggagttactgctcc
gaggaccagttccaccacctgaaaacctgcacccaggcatggccgcctcacagactgtgc
gactgccagaggaagatcctagtacctccccctctccggggacccgagcagccagccagc
cacctaactcctcagatttttgcctggtgtcttgatttgccaggatgcataggttcctgg
ctgatgaacgtgatcaatacccctgccctgtttgcttcttccaacagcccagctcacatt
ccagagagacctggcacagtgaagggctcagaaccagatcacaggatgaagcctgctggg
agcgtgaatgacatggccctggatgccttcgacttggaccggatgaagcaggagatccta
gaggaggtggtgagagagctccacaaggtgaaggaggagatcatcgacgaggacagccag
aagcccagccagccccagactccagtgcaccagagcacgcacaggagcctgggcgcgctg
ctgtga

>gi568815584r:100046764_100259587|GENSCAN_predicted_peptide_2|519_aa
MAPGPQGLNSHFLDALWPFCLGTPSLGTRPFTLCGIMQPLYRALNSTGKGPVAPPPPRWR
LTRPPRALQPLRENDPVGIFEAALSAAPWTAFGPELRKACQVYQTPGHGLPWDAQKHALT
MCEPVAALADVSVSSQATASRGQALAHRHSRAGSAPRPPRQVQQSRAGRAPNGASRPTMG
NSASRSDFEWVYTDQPHTQRRKEILAPWGSLSHVLQSSRCLQAAKYPAIKALMRPDPRLK
WAVLVLVLVQMLACWLVRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAAR
NRWLAVFANLPVGVPYAASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLV
LQPFFYSLRPLCVHPKAVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHP
ISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYY
DHLPQHHSWVKVLWDFVFEDSLGPYARVKRVYRLAKDGL

>gi568815584r:100046764_100259587|GENSCAN_predicted_CDS_2|1560_bp
atggccccaggccctcaaggcctgaactcacacttcttggatgccctgtggcccttctgt
ctgggcactcccagccttggcaccaggccattcaccctctgtggcatcatgcagcctttg
taccgagccctgaactcgaccgggaaggggcctgttgctccccctcctcccaggtggcgt
cttacccgacctccgagggctctgcagccgctgcgggagaatgaccctgtcggtattttt
gaggctgctttgagcgcggccccctggactgcctttggccctgagctaaggaaggcctgc
caagtgtaccaaaccccgggccatggacttccatgggacgcacagaagcacgccctcact
atgtgcgagcctgtggcagcgctggctgatgtgtcagtcagctcccaggcaactgccagc
cgaggccaggctctggcccacaggcacagcagagctggttccgcgccgcggccgccgcga
caggtgcagcagagccgagccggccgcgctccgaacggcgcctcccgccccaccatgggc
aacagcgcgagccgcagcgacttcgagtgggtctacaccgaccagccgcacacgcagcgg
cgcaaggagatactggctccttgggggtccctcagccacgtgctgcagtccagcaggtgc
ctgcaggcagccaagtacccggccatcaaggccctgatgcggccagacccgcgcctcaag
tgggcggtgctggtgctggtgctggtgcagatgctggcctgctggctggtgcgcgggctg
gcctggcgctggctgctgttctgggcctacgcctttggtggctgcgtgaaccactcgctg
acgctggccatccacgacatctcgcacaacgcggccttcggcacgggccgtgcggcacgc
aaccgctggctggccgtgttcgccaacctgcccgtgggtgtgccctacgccgcctccttc
aagaagtaccacgtggaccaccaccgctacctgggcggcgacgggctggacgtggacgtg
cccacgcgtctggagggctggttcttctgcacacccgcccgcaagctgctctggctggtg
ctgcagcccttcttctactcactacggccgctctgcgtccaccccaaggccgtgacccgc
atggaggtgctcaacacgctggtgcagctggcggccgacctggccatctttgccctttgg
gggctcaagcccgtggtctacctgctggccagctccttcctgggcctgggcctgcacccc
atctcgggccacttcgtggccgagcactacatgttcctcaagggccacgagacctactcc
tactatgggcctctcaactggatcaccttcaatgtgggctaccacgtggagcaccacgac
ttccccagcatcccgggctacaacctgccgctggtgcggaagatcgcgcccgagtactac
gaccacctgccgcagcaccactcctgggtgaaggtgctctgggattttgtgtttgaggac
tccctggggccctatgccagggtgaagcgggtgtacaggctggcaaaagatggtctgtga

>gi568815584r:100046764_100259587|GENSCAN_predicted_peptide_3|610_aa
MAGCRSRALPRGEAAKARQEIERPALLGDPVRPPQLLAQVLSPSLPAPAGRSECGARQAH
AHPELYLARKRGVQPRFQPMPLPPHLPANQGSRLWPRPAQRRAPTVQRAARKLRQEEGRR
CPGRLRRPAMAPLLSPRTRKAASQAVAAFGARFLSGRAFAGRLPVQVSPGSVTATLPAER
VSQEAGARSPRRSRAAAALGAEGGGYDRDTGGAAASSRGSRPRGARGRADRSPAPKAAAV
AATPRSRVRPRPEAAGFVAVAPRRAAAARHREAGGGGGGGGALTSRAAGQPGRVRAAPPP
VPSAPIREEPGDRGAEAAAAVAAEPSAMASGDTLYIATDGSEMPAEIVELHEIEVETIPV
ETIETTVVGEEEEEDDDDEDGGGGDHGGGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDD
PTQVHHHQEVILVQTREEVVGGDDSDGLRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTV
AAAGKSGGGGSSSSGGGRVKKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIK
TLEGEFSVTMWSSAPGWTLPRRSRSPKSSFAAGRDLGLHVGLACAGSERQSEPVTAVASE
FLAFSPSCGT

>gi568815584r:100046764_100259587|GENSCAN_predicted_CDS_3|1833_bp
atggcgggctgcaggtcccgagccctgccccgcggggaggcagctaaggcccggcaagaa
atcgagcggccggcactgctgggggacccggtgcgccctccgcagctgctggcccaggtg
ctaagcccctcactgcctgcgccggctggccgctccgagtgtggggcccgccaagcccac
gcccacccggaactctatctggcccgcaagcgcggcgtgcagccccggttccagcccatg
cctctccctccacacctcccggcaaaccaaggaagccggctctggcctcggccagcccag
agaagggctcccacggtgcagcgtgccgcgaggaagctgcggcaggaagaagggcggagg
tgccccgggcgcctgagacgcccggcaatggccccgctactctcgccgcgcacacgcaaa
gccgcttcccaggcagttgcggcgttcggggcccgcttcctctcgggccgggccttcgcc
ggccgcctgcccgtacaggtgtcccccggctccgtgactgcgactctcccagcggagagg
gtctcccaggaagcaggggcgaggagccctcgaaggtctcgggcggcagcggctctcggc
gcagagggcggagggtacgaccgcgacacaggcggggcggcagctagctcgcgaggctcc
cgcccccgtggtgcccggggccgcgcggaccgctcaccggctcccaaggcagcggctgta
gcggcgacgccccgttcccgagtgcggccccggcccgaggcggcgggttttgtggctgtt
gcaccgcgaagggcggcagccgcgcgacaccgggaagcgggaggcggtggcggcggcggc
ggcgcgctgacgtcacgcgccgcgggccagccagggcgcgtgcgagccgccccgcccccg
gtcccatcggccccaatccgggaggagcccggcgaccgaggagccgaggccgccgcggcc
gtggcggcggagccctcagccatggcctcgggcgacaccctctacatcgccacggacggc
tcggagatgccggccgagatcgtggagctgcacgagatcgaggtggagaccatcccggtg
gagaccatcgagaccacagtggtgggcgaggaggaggaggaggacgacgacgacgaggac
ggcggcggtggcgaccacggcggcgggggcggccacgggcacgccggccaccaccaccac
caccatcaccaccaccaccacccgcccatgatcgctctgcagccgctggtcaccgacgac
ccgacccaggtgcaccaccaccaggaggtgatcctggtgcagacgcgcgaggaggtggtg
ggcggcgacgactcggacgggctgcgcgccgaggacggcttcgaggatcagattctcatc
ccggtgcccgcgccggccggcggcgacgacgactacattgaacaaacgctggtcaccgtg
gcggcggccggcaagagcggcggcggcggctcgtcgtcgtcgggaggcggccgcgtcaag
aagggcggcggcaagaagagcggcaagaagagttacctcagcggcggggccggcgcggcg
ggcggcggcggcgccgacccgggcaacaagaagtgggagcagaagcaggtgcagatcaag
accctggagggcgagttctcggtcaccatgtggtcctcagcgccgggctggaccctgccc
cggcggtcacgctcgcccaagtcgtcgtttgctgcggggcgggacttggggctgcacgta
gggctcgcgtgtgcgggctccgagcgtcagtcggagcctgtcaccgccgttgccagcgaa
ttcctggccttttcgccttcctgcggtacctag