GENSCAN 1.0	Date run: 23-Apr-119	Time: 11:12:06

Sequence gi568815584f:72837979_73058802 : 220824 bp : 46.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2197   2267   71  0  2   51   88    86 0.433   5.42
 1.02 Intr +  13981  14069   89  1  2   61   96    40 0.099   1.71
 1.03 Intr +  34539  35419  881  1  2   32   53   274 0.097   9.35
 1.04 Intr +  41764  41872  109  0  1   67   62    25 0.009  -2.34
 1.05 Term +  46080  46192  113  1  2  121   43    27 0.160   0.22
 1.06 PlyA +  48529  48534    6                               1.05

 2.05 PlyA -  49061  49056    6                               1.05
 2.04 Term -  49367  49261  107  0  2   98   42    86 0.191   3.57
 2.03 Intr -  60863  60750  114  0  0   81   84    55 0.567   4.82
 2.02 Intr -  63241  63134  108  2  0  107   80    82 0.764   9.56
 2.01 Init -  69077  69074    4  2  1   86   69     0 0.160  -1.94
 2.00 Prom -  79839  79800   40                              -2.86

 3.04 PlyA -  82592  82587    6                               1.05
 3.03 Term -  88160  87999  162  2  0  107   40    87 0.074   3.74
 3.02 Intr -  91831  91676  156  1  0  -47   79   227 0.169   8.51
 3.01 Init -  91952  91893   60  2  0  110   66   161 0.946  17.35
 3.00 Prom -  95291  95252   40                              -2.56

 4.00 Prom +  96769  96808   40                              -8.66
 4.01 Init + 101771 101924  154  1  1   81  110    30 0.959   4.65
 4.02 Intr + 102242 102399  158  0  2   36   86   244 0.974  18.73
 4.03 Intr + 103767 103846   80  2  2   14   63    70 0.377  -4.55
 4.04 Intr + 105016 105118  103  1  1   86  105   123 0.439  13.98
 4.05 Intr + 107906 108049  144  1  0  122  102   286 0.995  33.88
 4.06 Intr + 109164 109240   77  2  2   85   48    46 0.457  -1.39
 4.07 Intr + 113820 113899   80  0  2   63   92    23 0.271  -0.61
 4.08 Intr + 116186 116284   99  0  0   71   99    45 0.444   3.98
 4.09 Intr + 116408 116505   98  0  2   89   12   118 0.983   4.03
 4.10 Intr + 117545 117718  174  1  0   76   97   142 0.970  14.04
 4.11 Intr + 118408 118522  115  0  1  116   80   219 0.999  23.92
 4.12 Term + 120634 120827  194  2  2  102   31   221 0.999  15.38
 4.13 PlyA + 121650 121655    6                               1.05

 5.16 PlyA - 123085 123080    6                               1.05
 5.15 Term - 123606 123460  147  0  0   31   44    93 0.206  -2.90
 5.14 Intr - 125868 125777   92  1  2   68   84    77 0.162   5.01
 5.13 Intr - 133136 132915  222  0  0   92   17   238 0.084  15.20
 5.12 Intr - 136215 136102  114  1  0   71   52   212 0.935  16.32
 5.11 Intr - 136981 136801  181  1  1   33   65   177 0.992   9.34
 5.10 Intr - 137743 137573  171  1  0   69   60   201 0.996  15.54
 5.09 Intr - 137858 137832   27  2  0   80  113    12 0.699   1.21
 5.08 Intr - 140066 139949  118  1  1  111   46   141 0.662  12.67
 5.07 Intr - 140256 140159   98  0  2   57   92    45 0.992   0.61
 5.06 Intr - 140991 140883  109  2  1   45  113   111 0.766   9.59
 5.05 Intr - 143917 143811  107  1  2   93  106   133 0.986  14.61
 5.04 Intr - 155379 155165  215  1  2   77   86   241 0.752  21.23
 5.03 Intr - 160337 159833  505  2  1  126   85   432 0.833  39.25
 5.02 Intr - 186537 186048  490  2  1   66  115   317 0.036  25.21
 5.01 Intr - 210218 210049  170  2  2   88   87    76 0.351   6.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 133136 132904  233  0  2   92   40   246 0.916  16.84
S.002 Init - 167532 167476   57  0  0   80   87    60 0.882   4.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:72837979_73058802|GENSCAN_predicted_peptide_1|420_aa
MAFTCNTADLEGKACSRGTKLSPSIEQTSINPQKTLSRRTLSLLETQKLRGAAEISSTKL
PMTFFTELEKTTLKFIWNQKRARIAKAILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQ
NRDIDQWNRTEASEIMPHIYNYLIFDKPDKNKQWGKDSLFNKWCWENWLAIWRKMKLEPF
LTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGIGKDFMSKTPKAMATKAKIDKWD
LNKLKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLISRIYNELKQIYKKKTNNPINKW
AKDINRHFSKEDIYAAKRHMKQCSSSLAIREMQIKTTMRYHLTPVRKGHRASPQTNKFTH
VSHTEVLTLEPMGLQGIQRWALPVISVEGGARDQARTKGPSSQKSTPLYQPRFCFLWFGG

>gi568815584f:72837979_73058802|GENSCAN_predicted_CDS_1|1263_bp
atggccttcacttgtaacacagctgatctggagggtaaagcctgcagccgtggaaccaag
ctctcgccaagcatagagcaaacatcaattaatcctcaaaagacgctttcaagaagaaca
ttatcccttttggagacgcagaagctaagaggtgccgcagaaatttcttccaccaagcta
ccaatgactttcttcacggaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcccgcattgccaaggcaatcctaagccaaaagaacaaagctggaggcatcatgcta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatagaccaatggaacagaacagaggcctcagaaataatgccgcatatctac
aactatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatggagaaaaatgaaactggagcccttc
cttacaccttatactaaaattaattcaagatggattaaagatttaaatgttagacctaaa
accataaaaaccctagaagaaaacctaggcaataccattcaggacataggcataggcaag
gacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaaataaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctacagaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaacaagtgg
gcgaaggatataaacagacacttctcaaaagaagatatttatgcagccaaaagacacatg
aaacaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatac
catctcacaccagttagaaagggacacagagcatcccctcagactaacaagttcacacac
gtctctcacactgaggttcttaccctagagcccatgggcctccagggcatccagagatgg
gctcttccagtcatctcagttgaaggaggagccagagaccaggcaaggaccaaaggccca
agttcccagaagagcaccccactctaccaaccgcgcttctgcttcctctggtttggtggg
tga

>gi568815584f:72837979_73058802|GENSCAN_predicted_peptide_2|110_aa
MGGLASCFDLGQKNYQDFRYGVHVGGLKEDLENVDLAAQCLEEHIRAGSGSQGTSTANQS
LRPWLVALWMDGGIEVIFFSLASHPEADENEELEDQLAYFDVDKHSVFGG

>gi568815584f:72837979_73058802|GENSCAN_predicted_CDS_2|333_bp
atgggaggccttgccagttgctttgacttaggacagaagaactaccaggatttcagatat
ggtgtccatgtgggtgggctgaaggaggacttggaaaatgtggacttggcagctcagtgc
ctggaggaacatatcagagctggttctggatctcagggaaccagcacagccaaccagtcg
ctgaggccatggctggttgctctgtggatggacggagggattgaggtgattttcttctca
ctagcatcccatccagaagctgatgagaatgaggaacttgaagaccaattggcctatttt
gacgtggataagcactcagtttttggtggttaa

>gi568815584f:72837979_73058802|GENSCAN_predicted_peptide_3|125_aa
MALRYLMAVGLNKGHKVTKNRDMIREVCGFASYELRAMESLKVFKEKWALKFIKKRVGTH
IRAKRKREELSKGDAALEKSSRCSGKSEGVCEARDRSNVMLRLAAKSSAVASGGRGRCPG
SAFRV

>gi568815584f:72837979_73058802|GENSCAN_predicted_CDS_3|378_bp
atggctctgcgctaccttatggccgtgggcctcaacaagggccacaaggtgaccaagaac
cgggacatgatccgggaggtgtgtggcttcgcttcgtacgagctgcgcgccatggagtca
ctgaaggtcttcaaggagaaatgggccctcaagttcatcaagaaaagggtggggacgcac
atccgtgccaagaggaagcgggaggagctgagcaagggtgatgcggccctggagaagtcc
tctcgctgtagtggaaagagcgaaggagtctgtgaggcgagggacagaagtaacgtgatg
ttacgactggcggcgaagtcttcggcagtggcctcaggcggccgaggccgctgccctggg
tctgcgttcagggtgtag

>gi568815584f:72837979_73058802|GENSCAN_predicted_peptide_4|491_aa
MAGTQVLGCKLTQLCVNRSDSRAAQPAHDSGHGDDESPSTSSGTAGTSSVPELPGFYFDP
EKKRYFRLLPGHNNCNPLTKESIRQKEMESKRLRLLQEEDRRKKIARMGFNASSMLRKSQ
LGFLNVTNYCHLAHELRLSCMERKKVQIRSMDPSALASDRFNLILADTNSDRLFTVNDVK
VGGSKYGIINLQSLKTPTLKVFMHENLYFTNRKVNSVCWASLNHLDSHILYPLAEEEVWL
CLMGLAETPGCATLLPASLFVNSHPGIDRPGMLCSFRIPGAWSCAWSLNIQANNCFSTGL
SRRVLLTNVVTGHRQSFGTNSDVLAQQFALMAPLLFNGCRSGEIFAIDLRCGNQGKGWKA
TRLFHDSAVTSVRILQDEQYLMASDMAGKIKLWDLRTTKCVRQYEGHVNEYAYLPLHVHE
EEGILVAVGQDCYTRIWSLHDARLLRTIPSPYPASKADIPSVAFSSRLGGSRGAPGLLMA
VGQDLYCYSYS

>gi568815584f:72837979_73058802|GENSCAN_predicted_CDS_4|1476_bp
atggctggaactcaagtcctgggctgcaagttaacacagctgtgtgtcaacaggtctgac
tcccgggcagcacagcccgctcacgattccggccacggtgatgacgagtctccgtcaacc
tcgtctggcacagctgggacctcctctgtgccagagctacctgggttttactttgaccct
gaaaagaaacgctacttccgcttgctccctggacataacaactgcaaccccctgacgaaa
gagagcatccggcagaaggagatggagagcaagagactgcggctgctccaggaagaagac
agacggaaaaagattgccaggatgggatttaatgcatcttccatgctacgaaaaagccag
ctgggttttctcaacgtcaccaattactgccatttagcccacgagctgcgtctcagctgc
atggagaggaaaaaggtccagattcgaagcatggatccctccgccttggcaagcgaccga
tttaacctcatactggcagataccaacagtgaccggctcttcacagtgaacgatgttaaa
gttggaggctccaagtatggtatcatcaacctgcaaagtctgaagacccctacgctcaag
gtgttcatgcacgaaaacctctacttcaccaaccggaaggtgaattcggtgtgctgggcc
tcgctgaatcacttggattcccacattctgtatcctttggcagaggaagaggtttggcta
tgcctcatgggactcgcagagactccaggctgtgccaccctgctcccagcatcactgttc
gtcaatagtcacccaggaatagaccggcctggcatgctctgcagtttccggatccctggt
gcctggtcctgtgcctggtccctgaatatccaagcaaataactgcttcagtacaggcttg
tctcggcgggtcctgttgaccaacgtggtgacgggacaccggcagtcctttgggaccaac
agtgatgtcttggcccagcagtttgctctcatggctcctctgctgtttaatggctgccgc
tctggggaaatctttgccattgatctgcgttgtggaaatcaaggcaagggatggaaggcc
acccgcctgtttcatgattcagcagtgacctctgtgcggatcctccaagatgagcaatac
ctgatggcttcagacatggctggaaagatcaagctgtgggacctgaggaccacgaagtgc
gtaaggcagtacgaaggccacgtgaatgagtacgcctacctgcccctgcatgtgcacgag
gaagaaggaatcctggtggcagtgggccaggactgctacacgagaatctggagcctccac
gatgcccgcctactgagaaccataccctccccgtaccctgcctccaaggccgacattccc
agtgtggccttctcgtcgcggctggggggctcccggggcgcgccggggctgctcatggct
gtcgggcaggacctttactgttactcctacagctaa

>gi568815584f:72837979_73058802|GENSCAN_predicted_peptide_5|921_aa
CGPHSKSDFPNAQKMAMLSPQTFEFRNKIELISEALPEDQERTFQDLQEPELSHTPNVSM
SAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHERI
RLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTVY
NVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHLK
VVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLLG
ATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTAR
CGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYKG
TRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSF
FPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEE
VSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVH
VWPGGVSGSELATTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAP
AYWRPNSQILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCD
NCYEARNVQLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYW
VPDHEILHCHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNK
KPAVMSLPMWLKTLGAEHRITLITVDDKKLGEREGPEILGLAELAFLPREMRKISPLSLT
HVEKMDEIKINWTKWYKGSCE

>gi568815584f:72837979_73058802|GENSCAN_predicted_CDS_5|2766_bp
tgtgggcctcattctaagtctgacttccctaatgctcagaagatggctatgttgagtcca
caaacttttgaattcagaaacaagattgagttgatttcagaagctctcccagaagatcaa
gaaagaactttccaggatctccaggaacctgaattgagtcatacgccaaacgtgagtatg
agtgcccagacttccccagcagagaagggcctgaatccggggctgatgtgccaggaaagt
tacgcttgcagcgggactgatgaagctatctttgagtgtgatgagtgctgcagtctgcag
tgtctccgctgcgaggaggagctccatcggcaggagcgcctgagaaaccatgagcggata
agactcaaacctggccatgtcccttactgtgacctctgcaagggtctcagtgggcattta
ccaggtgttaggcagagggcaatagtgaggtgccagacctgcaaaattaacttgtgcctg
gagtgccagaagaggactcattctgggggtaacaaaaggagacaccctgttactgtgtac
aatgtcagtaatctccaggagtcactggaggcagaagagatggatgaggagaccaagagg
aagaagatgactgagaaggttgtgagtttcctcctagtagacgaaaatgaagaaattcag
gtaacaaatgaagaagactttattagaaaattggactgcaaacctgatcagcatctgaaa
gtggtttccatttttggaaatactggtgatggaaagtctcatactctcaaccacactttc
ttttatggtcgtgaagtctttaaaacctccccgacccaggagtcctgcactgtgggagtg
tgggcagcctatgacccagttcacaaagtagcagtgatcgatacggaagggctcctgggg
gccaccgtgaatctaagccagagaacacggctgctgcttaaggtcctggccatctcagac
ctcgtcatctatcgaactcatgcagaccggctgcataacgacctcttcaaattccttggg
gatgcctcagaagcttatctgaagcacttcaccaaggagctcaaggccaccactgctcgc
tgtggcctggatgtccctttatccacactgggccctgcagttatcatcttccatgagacc
gtgcacacccagctactgggctctgatcatccctcagaggtgccagagaagctcatccag
gaccggttccggaagctgggccgtttccctgaagcctttagttccattcactacaaggga
acgaggacttacaaccctcccacggacttttctgggcttcggcgtgctttggagcagcta
ctagagaataacaccacccgttctccccggcacccgggagtcatcttcaaagccctgaag
gcactaagtgaccgcttcagcggtgagatccccgatgaccagatggcgcacagctccttt
tttccagatgagtatttcacctgctcctccttgtgcctcagctgtggggttggatgtaag
aaaagcatgaatcatgggaaggaaggagtgcctcatgaagccaagagccgctgcagatac
tcccaccagtatgacaaccgagtgtatacctgcaaggcctgctatgagagaggcgaggaa
gtcagtgtagtgcccaaaacatctgcttccactgactccccctggatgggtctcgcaaaa
tatgcctggtctgggtatgtgatcgaatgtcctaactgtggcgtggtctatcgtagtcgg
cagtactggtttggaaaccaagatcctgtggatacggtggtgcggacagagattgtgcat
gtgtggcctggaggagttagtggttctgagttggccacgactgatgggtttctgaaggac
aacaacaatgctgcccagcgcctgttggacgggatgaacttcatggctcagtcggtgtcc
gagcttagccttggacccaccaaggctgtgacttcctggctgacagaccagatcgcccct
gcctactggaggcccaactcccagattctgagctgcaacaagtgtgcgacgtcctttaaa
gataacgacactaagcatcactgccgagcctgtggggagggcttctgtgacagctgttca
tcaaagactcggccagtgcctgagcggggctggggccctgcgccagtgcgggtctgtgac
aactgctacgaagccaggaacgtccagttagctgttaccgaggcacaagtggacgatgaa
ggtggaacgctcattgctcggaaggtgggcgaggccgtgcagaacactctgggagccgtg
gtgacagccattgacataccactaggtctggtaaaggacgcggccaggcctgcgtactgg
gtgcctgaccacgaaatcctccactgccacaactgccggaaggagttcagcatcaagctc
tccaagcaccactgccgggcctgcggacagggcttctgtgatgagtgctcccatgaccgc
cgggctgttccttctcgtggctgggaccatcccgtccgagtctgcttcaactgcaataaa
aagcccgctgtgatgagcctgcctatgtggctgaagacccttggtgctgaacaccggatc
accctaattacagttgatgacaagaaactaggggaaagggaggggccagaaattctgggc
ttggcagagcttgcctttctcccacgagaaatgagaaaaatctcacccttgtctctgacc
catgtggaaaaaatggatgagatcaagatcaattggaccaaatggtacaaaggatcatgt
gagtag