GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:10:01

Sequence gi568815584f:20791687_20992166 : 200480 bp : 43.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1125   1120    6                               1.05
 1.01 Sngl -  10382   9912  471  2  0  121   45   630 0.999  56.12
 1.00 Prom -  28720  28681   40                              -0.66

 2.08 PlyA -  29665  29660    6                               1.05
 2.07 Term -  41030  40797  234  2  0   81   41    93 0.471   0.22
 2.06 Intr -  42701  42580  122  0  2   46  115    57 0.730   4.41
 2.05 Intr -  43721  43650   72  0  0  106   47    54 0.518   2.48
 2.04 Intr -  44691  44463  229  0  1   38  105    71 0.357   1.24
 2.03 Intr -  44979  44840  140  1  2   66   19   100 0.307   1.08
 2.02 Intr -  50661  50509  153  1  0   96   59    60 0.360   3.94
 2.01 Init -  58958  58931   28  2  1   76   75    19 0.228  -0.84
 2.00 Prom -  60015  59976   40                              -7.46

 3.00 Prom +  61781  61820   40                              -5.26
 3.01 Sngl +  69455  70474 1020  1  0   88   43   486 0.998  41.16
 3.02 PlyA +  70492  70497    6                               1.05

 4.00 Prom +  70881  70920   40                              -4.96
 4.01 Init +  72800  73624  825  1  0   60   44   325 0.204  20.02
 4.02 Term +  82098  82226  129  2  0  -14   47   206 0.112   4.48
 4.03 PlyA +  83715  83720    6                               1.05

 5.00 Prom +  89975  90014   40                              -4.96
 5.01 Init +  91003  91125  123  0  0   62   51    97 0.595   3.57
 5.02 Term +  96337  96504  168  0  0  123   51    58 0.873   3.48
 5.03 PlyA +  97061  97066    6                               1.05

 6.00 Prom +  97795  97834   40                              -4.76
 6.01 Sngl + 100001 100483  483  1  0   92   43   172 0.900   7.21
 6.02 PlyA + 100641 100646    6                               1.05

 7.00 Prom + 101231 101270   40                              -7.26
 7.01 Init + 101405 101476   72  1  0   75  113    84 0.905  10.67
 7.02 Term + 101862 101921   60  2  0  128   32     4 0.621  -3.40
 7.03 PlyA + 102468 102473    6                               1.05

 8.00 Prom + 104932 104971   40                              -1.06
 8.01 Init + 109671 109914  244  2  1   49   49   129 0.170   3.00
 8.02 Intr + 122226 122473  248  1  2   43   47   205 0.020   9.08
 8.03 Intr + 123170 124221 1052  1  2   13   11   441 0.038  18.11
 8.04 Term + 128228 128435  208  2  1   66   43   117 0.579   1.81
 8.05 PlyA + 128593 128598    6                               1.05

 9.00 Prom + 133456 133495   40                              -0.86
 9.01 Sngl + 164086 164571  486  0  0   92   43   152 0.909   5.18
 9.02 PlyA + 164729 164734    6                               1.05

10.03 PlyA - 165070 165065    6                               1.05
10.02 Term - 176527 176440   88  0  1   69   49    78 0.407  -0.87
10.01 Init - 177851 177784   68  2  2   69  100    51 0.301   4.96
10.00 Prom - 183879 183840   40                              -3.26

11.00 Prom + 188278 188317   40                              -1.86
11.01 Init + 198317 198391   75  1  0  113  100    78 0.996  10.60
11.02 Intr + 198544 198697  154  0  1  106   97   137 0.950  16.05
11.03 Term + 199765 199823   59  2  2   92   35    61 0.873  -0.95
11.04 PlyA + 200213 200218    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_1|156_aa
MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_1|471_bp
atggctctggagaagtctcttgtccggctccttctgcttgtcctgatactgctggtgctg
ggctgggtccagccttccctgggcaaggaatcccgggccaagaaattccagcggcagcat
atggactcagacagttcccccagcagcagctccacctactgtaaccaaatgatgaggcgc
cggaatatgacacaggggcggtgcaaaccagtgaacacctttgtgcacgagcccctggta
gatgtccagaatgtctgtttccaggaaaaggtcacctgcaagaacgggcagggcaactgc
tacaagagcaactccagcatgcacatcacagactgccgcctgacaaacggctccaggtac
cccaactgtgcataccggaccagcccgaaggagagacacatcattgtggcctgtgaaggg
agcccatatgtgccagtccactttgatgcttctgtggaggactctacctaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_2|325_aa
MVLETKILVAPVDFYFSHASNPGLSGPTEPGPPRLQAIDVLLDLSGKFFPSTLHNSYSSL
GPVPRHKAICVSSVHQQGSRSRKTASWKTPTLVGRHVPLKIEKEAVWHVAPHRVVLSVGS
LSGFKRIQEPYILVPKPGRGSGLHPPWTYPSTPESRPQQPDKGSSSASSQLSVRAHRSLI
SPTAAIFPDGITSKRTHFPSYTPPPFSGALQAHGAAAPHGGLLAIHLHLVPISSVAMKAT
GPDNAQTQKALTSAPVLTCPDTDLTKPFSLYTDEWHGVALGVLTQPKGPTLQVVAISLNS
LKPQFLDGLPVSKHWWQLLSSPLKA

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_2|978_bp
atggtgttagagaccaagatcttggtagcccctgtagacttctacttcagccacgcaagc
aatccagggctttcagggcccactgagccaggtcctcctcgtttacaggccattgacgtg
ctactggatttgtcaggaaagttctttccctcaacattacataactcctactcatctttg
ggcccagtcccaaggcacaaggctatttgtgtcagcagcgtgcaccagcaaggtagccga
agcaggaagacagccagctggaagacccctaccctggtgggaagacacgtacccctgaag
attgaaaaagaggccgtctggcatgttgctccacaccgcgtcgtgttgtctgttggctcc
ctctcggggttcaaacggatacaagaaccttacattttggtgccaaaacccgggagaggc
tcaggtctgcatcccccgtggacctacccctccaccccggagagcaggccacagcagccg
gacaaaggaagctcctcagcctccagtcagctctctgtgcgtgcacaccggtcactgatc
tcgcctactgctgccatcttcccagatggcatcacctccaaacgtacccacttcccttcc
tacaccccgccccccttctcaggggccctgcaggcccacggggctgcagctccacatgga
ggcctcctagcaatccacctccacctcgtgcctatttcaagtgtggcaatgaaagccacc
ggtccagacaatgcccaaacccagaaggctctcacctcagcccccgtcctcacttgccca
gacacagacctcaccaaacctttttccctctacaccgatgaatggcatggagttgcactg
ggtgttctaacccagcctaaaggacccaccctccaggttgttgccatctctctaaacagc
ttgaagccacagttcttggatggcctgcctgtctccaagcattggtggcagctgctgtcc
tcacccttaaaagcctaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_3|339_aa
MGRNQSRKAENSKNQSASSPPEEHSSSPATEQSWTENHFDKLREEGFGQSVITNFSEPKE
DVRTHRKEAKNLEKRLDKWLIRINSIEKTLNDLMELKTMARELRDTCKSFSSQFDQLEER
VSVMEDQMNEMKREEKFREKRVKRNEQSLQKIWDYVKRPNLHLISVPESDGENATKLENT
LQDIIQENFPNLARQAKIQIQEIQRTPQRYSLRRATLRHTIVGFTKVEMKEKMLRAAREK
GRVTHKGKPIRLTADLSAETLQAKESGGQYSTFLKNFQPRISYPAKPSFISEGEKKSFTD
KQMLRDFVTTRPALQELLKEALNMERNNRYQPLQKHAKL

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_3|1020_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaatcagagtgcctcttctcct
ccagaggagcacagctcctcgccagcaacagaacaaagctggacggagaatcactttgac
aagttgagagaagaaggcttcggacaatcggtaataacaaacttctccgagccaaaggag
gatgttcgaacccatcgcaaagaagctaaaaaccttgaaaaaagattagacaaatggcta
attagaataaacagcatagagaagaccttaaatgacctgatggagctgaaaaccatggca
cgagaactacgtgacacatgcaaaagcttcagtagccaattcgatcaactggaagaaagg
gtatcagtgatggaagatcaaatgaatgaaatgaagcgagaagagaagtttagagaaaaa
agagtaaaaagaaatgaacaaagcctccaaaaaatatgggactatgtgaaaagaccaaat
ctacatctgattagtgtacctgaaagtgacggggagaatgcaaccaagttggaaaacact
ctgcaggatattatccaggagaacttccccaacctagcaaggcaggccaagattcaaatt
caggaaatacagagaacgccacaaagatactccttgagaagagcaactctaagacacaca
attgtcggattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaa
ggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcggcagaaact
ctacaagccaaagagagtgggggccaatattcaacattcttaaagaattttcaacccaga
atttcatacccagccaaaccaagcttcataagtgaaggagaaaaaaaatcctttacagac
aagcaaatgctgagagattttgtcaccaccaggcctgctttacaagagctcctgaaggaa
gcactaaacatggaaaggaacaaccggtaccagccactgcaaaaacatgccaaattgtaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_4|317_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KMAILPKVIYRFNAIHIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQRNKAGGITLP
DLKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIIPHIYSHLIFDKPDKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSSCTAKETTIREACGAAPPADQYDGHGNWETTKALG
LRSCPSSSGFSGNGFFR

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_4|954_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaattacaaaccactgctcaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccatatcaagctgcca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcatcgccaagtcaatcctaagccaaaggaacaaagctggaggcatcacgctacct
gacttgaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagagccctcagaaataataccacacatctacagc
catctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagttgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaatgtcagacctaaaacc
ataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactcaagagctcctgcacagcaaaagaaactaccatcagagaagcttgtggcgcg
gcgccccctgccgaccaatacgacggccacgggaactgggagaccacgaaggctctgggc
ctgcggagttgcccaagctcctccggcttctccggaaacggctttttccggtga

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_5|96_aa
MSYSKCKASLMTTVDGVEESGEFIEEISTLLDLEKENLVLEIGKELLIVEEKEERLSPFL
FHARNLIKGVRSTYSMVFRGDMQEDPHKKEGLGPPF

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_5|291_bp
atgtcttactccaagtgcaaagcttccctcatgaccactgttgatggggtggaagagtct
ggggaattcattgaagagatatccacattactggatctagagaaagaaaatcttgtcctg
gagatagggaaagaacttcttatagttgaggaaaaagaagaaaggcttagtcctttcctc
tttcatgccagaaacttgatcaaaggtgtcagatctacttattcaatggttttcagagga
gacatgcaggaggacccacacaagaaggaaggcctagggccacctttctga

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_6|160_aa
MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
SNCTYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_6|483_bp
atggttccaaaactgttcacttcccaaatttgtctgcttcttctgttggggcttatgggt
gtggagggctcactccatgccagacccccacagtttacgagggctcagtggtttgccatc
cagcacatcagtctgaacccccctcgatgcaccattgcaatgcgggcaattaacaattat
cgatggcgttgcaaaaaccaaaatacttttcttcgtacaacttttgctaatgtagttaat
gtttgtggtaaccaaagtatacgctgccctcataacagaactctcaacaattgtcatcgg
agtagattccgggtgcctttactccactgtgacctcataaatccaggtgcacagaatatt
tcaaactgcacgtatgcagacagaccaggaaggaggttctatgtagttgcatgtgacaac
agagatccacgggattctccacggtatcctgtggttccagttcacctggataccaccatc
taa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_7|43_aa
MGSRWSRGKEKGEEEEEEVGALMKTLRNSNFHSSDDSMSVMVL

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_7|132_bp
atggggagccgctggtcacgtgggaaggagaagggggaggaggaggaggaggaagtggga
gcactcatgaagaccctgagaaacagcaatttccattcctcagatgactccatgtcagta
atggtgctttaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_8|583_aa
MYHNLNNQISRELTHYQENSTKGMALIHEKSSPKIQSLPTKPASNTGNYIPISHMDGANI
QTVPVAHNDLELLASSDLPASEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQE
KVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELLISNFSKVSGYKINVQ
KSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKLLLNETKEDT
KKWKNIPCSWVGRINIVKMAILPKVIYTFNAILIKLPMTFFTELEKNTLKFIWNQKRARI
AKSILSQRNKAGGIMLLDFKLYYKATVTKTAWYWYQKRDIDQWNRTEPSEITPHIYNYLI
FDKPEKNKQRGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKT
LEENLGITIQDIGMGKVFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW
EKIFATYSSDKGLISRIYNELRQICKRETNNPIKKTLNNCHHSGVQVPLMYCNLTTPSPQ
NISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDTII

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_8|1752_bp
atgtaccacaatttgaacaaccagatctcacgagaactcactcactatcaggagaacagc
accaagggaatggcgctgattcacgagaaatccagccccaagatccaatcacttcccacc
aagcctgcctccaacactgggaattatattccaatatcacatatggatggggcaaatatc
caaactgtcccagttgcccacaatgatcttgagctcttggcctcaagtgatcttcctgcc
tcagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaactagaa
aatctagaagaaatggataaattcctcgacacatacactctcccaagactaaaccaggaa
aaagttgaatctctgaatagaccaataacaggttctgaaattgtggcaataatcaatagc
ttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtac
aaggaggaactgctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaa
aaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaa
ctcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttacaagggac
gtgaaggacctcttcaaggagaactacaaactgctgctcaatgaaacaaaagaggataca
aagaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggcc
atactgcccaaggtaatttatacattcaatgccatcctcatcaagctgccaatgactttc
ttcacagaattggaaaaaaatactttaaagttcatatggaaccaaaaaagagcccgcatc
gccaagtcaatcctaagccaaaggaacaaagctggaggcatcatgctacttgacttcaaa
ctatactacaaggctacagtaacaaaaacagcatggtactggtaccaaaagagagatata
gatcaatggaacagaacagagccctcagaaataacaccgcatatctacaactatctgatc
tttgacaaacctgagaaaaacaagcaacggggaaaggattccctatttaataaatggtgt
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggtcttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactc
aagagcttctgcacagcaaaagaaactaccatcagagtcaacaggcaacctacaaaatgg
gagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcagacaaatttgcaagagagaaacaaacaaccccatcaaaaaaactctcaacaattgt
catcatagtggagtccaggtgcctttaatgtactgtaacctcacaactccaagtccacag
aatatttcaaactgcaggtatgcgcagacaccagcaaacatgttctatatagttgcatgt
gacaacagggatcaacgacgggaccctccacagtatccagtggttccagttcacctggat
accatcatctaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_9|161_aa
MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY
QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI
SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_9|486_bp
atggttccaaaactgttcacttcccaaatttgtctgcttcttctgttggggcttctggct
gtggagggctcactccatgtcaaacctccacagtttacctgggctcaatggtttgaaacc
cagcacatcaatatgacctcccagcaatgcaccaatgcaatgcaggtcattaacaattat
caacggcgatgcaaaaaccaaaatactttccttcttacaacttttgctaacgtagttaat
gtttgtggtaacccaaatatgacctgtcctagtaacaaaactcgcaaaaattgtcaccac
agtggaagccaggtgcctttaatccactgtaacctcacaactccaagtccacagaatatt
tcaaactgcaggtatgcgcagacaccagcaaacatgttctatatagttgcatgtgacaac
agagatcaacgacgagaccctccacagtatccggtggttccagttcacctggatagaatc
atctaa

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_10|51_aa
MIHKPGAMTIWKGQAETGEAQRRLFTSQVETLIISPNPLIYQFLPRNSYLS

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_10|156_bp
atgattcacaagcctggggccatgaccatctggaaaggccaagcagagactggtgaggcc
cagcgaagactttttacatcccaagtggaaacactgatcatctccccaaatcccctcatc
taccagttccttcctcggaattcctatctcagttga

>gi568815584f:20791687_20992166|GENSCAN_predicted_peptide_11|95_aa
MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
VRLPQALANGAQLLLLGIVEIIKTLNFGEVKKSKK

>gi568815584f:20791687_20992166|GENSCAN_predicted_CDS_11|288_bp
atggcggcggcactgaagtgtctactgacattaggaagatggtgccccggccttggagtg
gctccccaggcccgggcgctcgccgccttagtacccggagtgacccaggtagataacaag
tccggtttcctgcagaagaggcctcatcgccagcaccctggcatcctaaagctgccgcac
gtgcggctgccacaggcactggctaacggtgcccagttattgctacttggaatagtggag
atcatcaaaaccttaaattttggagaagtgaagaaatccaaaaaataa