GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:36:01

Sequence gi568815585f:48606818_48807855 : 201038 bp : 40.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3945   4109  165  2  0  -18   95   114 0.309   0.74
 1.02 Term +   4296   4406  111  2  0  118   45    67 0.813   2.98
 1.03 PlyA +   6028   6033    6                               1.05

 2.00 Prom +  14808  14847   40                              -4.35
 2.01 Init +  16573  16850  278  0  2   39   77   133 0.100   3.80
 2.02 Intr +  17376  17480  105  0  0  103   59    48 0.060   1.81
 2.03 Intr +  26468  26597  130  2  1   70   79    57 0.136   2.78
 2.04 Intr +  34151  34291  141  1  0   44   70   104 0.318   3.83
 2.05 Intr +  39536  39581   46  1  1  110   87    56 0.945   4.76
 2.06 Intr +  40062  40220  159  1  0  106   82    53 0.890   5.54
 2.07 Term +  46114  46277  164  2  2   65   43   141 0.882   4.42
 2.08 PlyA +  49382  49387    6                               1.05

 3.04 PlyA -  50142  50137    6                               1.05
 3.03 Term -  51787  51623  165  1  0  100   49    95 0.655   3.73
 3.02 Intr -  67741  67020  722  2  2   -5   77   395 0.019  19.32
 3.01 Init -  69281  69227   55  2  1  102   37    71 0.236   4.90
 3.00 Prom -  81925  81886   40                              -4.85

 4.00 Prom +  82220  82259   40                              -7.65
 4.01 Sngl +  91125  91763  639  2  0   54   43   283 0.770  16.33
 4.02 PlyA +  91991  91996    6                               1.05

 5.00 Prom +  92471  92510   40                              -3.35
 5.01 Sngl +  93107  93934  828  1  0   70   43   187 0.547   7.88
 5.02 PlyA +  94103  94108    6                               1.05

 6.00 Prom +  96046  96085   40                              -4.25
 6.01 Sngl + 100001 101041 1041  1  0   99   49   567 0.940  50.77
 6.02 PlyA + 101885 101890    6                               1.05

 7.00 Prom + 110011 110050   40                              -5.45
 7.01 Init + 116096 116123   28  1  1   83   95    12 0.254   0.66
 7.02 Intr + 121236 121363  128  1  2  103   80    61 0.373   6.28
 7.03 Term + 122247 122345   99  2  0   97   36    52 0.284  -1.95
 7.04 PlyA + 122568 122573    6                               1.05

 8.09 PlyA - 122909 122904    6                               1.05
 8.08 Term - 124408 124228  181  0  1   94   49   120 0.214   4.80
 8.07 Intr - 125041 124942  100  2  1   40  100    26 0.268  -2.75
 8.06 Intr - 125851 125771   81  2  0   75   94    72 0.603   5.19
 8.05 Intr - 126822 126787   36  1  0  122   61    59 0.164   3.92
 8.04 Intr - 127326 127162  165  1  0   62   42   137 0.660   5.51
 8.03 Intr - 131808 131453  356  2  2   44   35   177 0.200   2.01
 8.02 Intr - 132395 132330   66  1  0   91   80    53 0.203   1.90
 8.01 Init - 136871 136810   62  2  2   78   61    46 0.258   1.67
 8.00 Prom - 138326 138287   40                              -3.05

 9.00 Prom + 139979 140018   40                              -5.35
 9.01 Sngl + 144374 144820  447  1  0   71   54   158 0.276   6.68
 9.02 PlyA + 145120 145125    6                               1.05

10.00 Prom + 147407 147446   40                              -6.35
10.01 Init + 152947 153007   61  0  1   83   70    59 0.178   5.06
10.02 Term + 164801 165012  212  0  2    5   46   256 0.369   9.57
10.03 PlyA + 165031 165036    6                               1.05

11.00 Prom + 168862 168901   40                              -4.55
11.01 Init + 171340 171392   53  0  2   74   52    87 0.833   4.38
11.02 Intr + 176292 176471  180  0  0  113   95   166 0.977  17.86
11.03 Term + 179710 179824  115  1  1   78   55    58 0.501  -1.44
11.04 PlyA + 180703 180708    6                               1.05

12.03 PlyA - 181936 181931    6                               1.05
12.02 Term - 195304 195144  161  2  2   20   48   163 0.652   2.62
12.01 Init - 197276 197258   19  2  1   95   78    45 0.835   4.43

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_1|91_aa
WGITGGGGHWNCAGSDLKPAQHWISSKAHCNYNLATSMFTQGPGTLRSAGGKASKRQRSL
TLWPPTPQANYEYFQATANNPLMPKGSSVSL

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_1|276_bp
tggggtatcactgggggtggtggccactggaactgtgctgggtcagacctgaagccagca
cagcactggatctcatccaaggcccactgtaattacaacctggctacatctatgttcact
caaggcccagggactctacgatcagcaggtggcaaggccagcaagaggcagagaagcctc
accttgtggccaccaactccacaggcaaactatgagtacttccaagctactgctaataat
cccttaatgcccaagggctcttcagtcagtttgtga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_2|340_aa
MYGYPWHIDSDSGIHFAGRDPQDWAREHDIAGHFHLPHKPQAVGSIERKQWPIKSTTSNF
TGESCLAQVDECVICSLYLFKFSQREDMCPIDSCYVLSPLLPAVTYEANLFLQWAKTMLV
AHRKTPVGDCEFRVRCANKPGQLRYVPVAVWFPLFRGPWRCSSEGNQCPVVWWREGGRQL
HLIGGRVLPGESSGGREEADCRKGAKGPRALSKGREKSPCEEGVCLPFAFHHDCGKGGKT
PAPLQLPPALLDVRACACTEPRLEGSQVMMLLLPCMCSAQCSADLPAFYAGNEDLNSDGE
MSNGSIWNIFYGQNKWNLLAQKWVVEERGKLKVTSRFMDG

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_2|1023_bp
atgtatggatatccatggcacattgacagtgactcagggatccattttgctggacgtgac
cctcaggattgggccagggagcatgatatagcagggcatttccacctcccacataaaccc
caagcagtagggtcaattgagagaaaacaatggcctattaaaagcacgacttcaaacttt
actggggaatcctgtcttgcacaggtagatgaatgtgttatctgcagcctttatctcttt
aaattcagccagagggaggacatgtgccccatagacagttgttatgttctgtcaccatta
ttaccagctgtcacctatgaagcaaaccttttcctacaatgggccaagactatgctggtg
gctcacagaaaaacacccgttggggactgtgaatttagagtgaggtgcgcaaacaagcca
gggcagctcagatatgttccagtggcagtatggttccctttgttcaggggcccatggcga
tgtagcagtgagggaaaccagtgtccagtggtgtggtggcgtgaaggaggcagacagttg
catttaatcgggggtagagttttaccaggtgaatctagtggaggaagagaagaggcagat
tgtaggaaaggggctaaaggaccacgggctctaagcaagggaagagagaagtcaccttgt
gaagaaggtgtctgcttacccttcgccttccaccatgattgtgggaaaggaggaaagaca
ccagccccactgcagctaccacccgcactgctagatgtccgagcatgtgcctgcactgag
ccacgcctagagggcagccaggtgatgatgctgctcctgccttgcatgtgctctgcccag
tgctcagcagacctccctgctttctatgcaggaaacgaggatttgaacagtgatggagag
atgagtaatggttcgatttggaacatattttatgggcagaacaaatggaacttgttggct
cagaagtgggtggtggaagaaagagggaagttaaaagtgacttctaggtttatggatgga
tga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_3|313_aa
MAEQEQLRFAAPSKTNAETQCKKSKNIDNRLKKLLTRITSLEQNIKDLMELKNTARELYE
AYTSINSRIDQMEERISEIEDLLNEIKHEDKIKEKIMKRNKQSLKICDYMKRPNLHLIGV
PESDGENGSKLGNTLPDIIQENFPTLARQANIQIQEIQRTPLRYSSIRATPRHIIIRFTR
AEVKEKMLRTVRQKGWVTHKGKPIRLTADLSAETLQARKEWGPIFNILKEKNFQPGISRP
AKISFTGEGEIKSFTDKQMTLGFPIQHLLQGQQLSPVYPYPPDCLPMEGKHVSTAVPQAL
AQREAHECAQINK

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_3|942_bp
atggctgaacaggaacagctccggtttgcagctcccagtaagaccaatgcagaaacccaa
tgcaagaaatctaagaacattgataacaggttaaagaaactgctaactagaataaccagt
ttagagcagaacataaaagacctgatggagctgaagaacacagcacgagaactttatgaa
gcatatacaagtatcaatagcagaatcgatcaaatggaagaaaggatatcagagattgaa
gatctacttaatgaaataaagcatgaagacaagattaaagaaaaaataatgaaaaggaac
aaacaaagcctcaaaatatgtgactatatgaaaagaccaaacctacatctgattggtgta
cctgaaagtgacggggagaatggatctaagttgggaaacacacttccagatattatccaa
gagaacttccctaccctagcaagacaggccaacattcaaattcaggaaatacagagaaca
ccactaagatactcctcaataagagcaaccccaagacacataatcatcagattcaccagg
gctgaagtgaaggaaaaaatgttaaggacagtcagacagaaaggttgggttacccacaaa
gggaagcccatcagactaaccgcagatctctccgcagaaactctacaagccagaaaagag
tgggggccaatattcaacattcttaaagaaaagaattttcaacccggaatttcacgtcct
gctaaaataagcttcacaggtgaaggagaaataaaatcgtttacagacaagcaaatgacc
cttgggtttcccatccagcatttactccaggggcagcagttgtctcctgtctatccctac
ccaccagactgtttgcccatggaaggcaagcacgtgtctactgctgtaccccaggcccta
gcacagcgtgaagcacatgaatgtgctcagatcaataaatga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_4|212_aa
MKQEEKHREKKVKRNEKSLQEIWEDYVKRPKLRLIGVPASDGENGTKLENTLQDIIQENF
PNLARQANIEIQEIQRTPLRYSSRRATPRHIIVRFTKVEMKEKMLKAPREKGRVTHKGKP
IRLTADPLAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKSFTDKQMLRDF
VTTKPALQELLKEALNMERNNQFQPLQKHAKL

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_4|639_bp
atgaagcaagaagagaagcatagagagaaaaaagtaaaaagaaatgaaaaaagcctccaa
gaaatatgggaggactatgtgaaaagaccaaaactacgtctgattggtgtacctgcaagt
gacggggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttc
cccaacctagcgaggcaggccaacattgaaattcaggaaatacagagaacaccactaaga
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatg
aaggaaaaaatgttaaaggcacccagagagaaaggtagggttacccacaaagggaagccc
atcagactaacagcagatcccttggcagaaactctacaagccagaagagagtgggggcca
attttcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaacta
agcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagatttt
gtcaccaccaagcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaac
aaccagttccagccactgcaaaaacatgccaaattgtaa

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_5|275_aa
MDKFLDTYTLPRLNQKEVESLNRPITGSEIEGIINILPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEANIILIPKPGRDTTTKENFRLMSFMNIDAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIHHVNRTKDKNHMIISIDAEKAFNKI
QQPFMLKSVNKLGIWTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFN
IVLDVLARAIRQEKEIKGIKLGKEEVKLSLFADDI

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_5|828_bp
atggataaattcctggacacatataccctcccaagactaaatcagaaagaagttgaatcc
ctgaatagaccaataacaggttctgaaattgagggaataattaatatcctaccaaccaaa
aaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaagaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaattca
ttttatgaggccaacatcatcctgataccaaagcctggcagagacacaacaacaaaagag
aattttagactgatgtccttcatgaacattgatgcaaaaatcctaaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccacgatcaagttggcttcatccct
gggatgcaaggctggttcaacatatgcaaatcaataaacgtaatccatcatgtaaacaga
accaaagacaaaaaccacatgattatctccatagatgcagaaaaggccttcaacaaaatt
caacaacccttcatgctaaaaagtgtcaataaactaggtatttggacgtatctcaaaata
ataagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaattggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggacgttctggccagggcaatcaggcaagagaaagaaataaagggtattaaa
ttaggaaaagaggaagtcaaattgtcactgtttgcagatgacatttag

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_6|346_aa
MERKFMSLQPSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVYLIIFFWGVLGNGLSI
YVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADYYLRGSNWIFGDLACRIMSYSLYV
NMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIWILIMASSIMLLDSGSEQ
NGSVTSCLELNLYKIAKLQTMNYIALVVGCLLPFFTLSICYLLIIRVLLKVEVPESGLRV
SHRKALTTIIITLIIFFLCFLPYHTLRTVHLTTWKVGLCKDRLHKALVITLALAAANACF
NPLLYYFAGENFKDRLKSALRKGHPQKAKTKCVFPVSVWLRKETRV

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_6|1041_bp
atggagagaaaatttatgtccttgcaaccatccatctccgtatcagaaatggaaccaaat
ggcaccttcagcaataacaacagcaggaactgcacaattgaaaacttcaagagagaattt
ttcccaattgtatatctgataatatttttctggggagtcttgggaaatgggttgtccata
tatgttttcctgcagccttataagaagtccacatctgtgaacgttttcatgctaaatctg
gccatttcagatctcctgttcataagcacgcttcccttcagggctgactattatcttaga
ggctccaattggatatttggagacctggcctgcaggattatgtcttattccttgtatgtc
aacatgtacagcagtatttatttcctgaccgtgctgagtgttgtgcgtttcctggcaatg
gttcacccctttcggcttctgcatgtcaccagcatcaggagtgcctggatcctctgtggg
atcatatggatccttatcatggcttcctcaataatgctcctggacagtggctctgagcag
aacggcagtgtcacatcatgcttagagctgaatctctataaaattgctaagctgcagacc
atgaactatattgccttggtggtgggctgcctgctgccatttttcacactcagcatctgt
tatctgctgatcattcgggttctgttaaaagtggaggtcccagaatcggggctgcgggtt
tctcacaggaaggcactgaccaccatcatcatcaccttgatcatcttcttcttgtgtttc
ctgccctatcacacactgaggaccgtccacttgacgacatggaaagtgggtttatgcaaa
gacagactgcataaagctttggttatcacactggccttggcagcagccaatgcctgcttc
aatcctctgctctattactttgctggggagaattttaaggacagactaaagtctgcactc
agaaaaggccatccacagaaggcaaagacaaagtgtgttttccctgttagtgtgtggttg
agaaaggaaacaagagtataa

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_7|84_aa
MATIDSPSTYEKLRHKQFKASWIPNQPLPSTAADQTTPLRSQRESPLQFDAEQCWLPAST
RNQQACSHPRDLAKAITFARNAFL

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_7|255_bp
atggctaccatcgattccccctctacctatgaaaagctcaggcataaacaatttaaggca
tcttggattccaaaccaacccctacccagtactgctgcagaccagactacccctcttaga
agtcagagggaatcccctctccaatttgatgctgagcaatgctggcttcctgcctctact
cgaaaccagcaagcatgctcccatcccagggacttggcaaaggctattacctttgcccgg
aatgctttcctttaa

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_8|348_aa
MTSATGQLLGRFQEAYNHGRRFSHFYQVALSSSSVPELKNMCGQLLHEEPWKRLQEMTGA
SLLQQKAFRTAGQHGKAACCVRAPAVITVFLGAMGLRKGKQRSLDSLEENTKVYLLFPGL
AVHTHITSFNPCFSRKIAESLRGSGSCQGHTAPKEQGSSDSANQTGSSHESPHSPSDHAK
APNNPHRAQPTSAAAALKAPASLFWVCSHIPANQECYPSQTRLYPSVTSHSRHGKLETNT
VHSCAKCFRRPITLQEVRLYSEPPFCFPYAGNLGSYRSALKAKENEQKSRCPSLMNSRAK
KLLPPVETCVSPTGLNCPVSAQHSSGHPGGSSLGLSSSTRWVVALHLC

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_8|1047_bp
atgacatcggcaactggtcagcttctggggaggtttcaggaagcttacaatcatggcaga
aggttcagccatttttatcaagtcgctttgtcgtcttcatcagttcctgagctgaagaac
atgtgcgggcagcttctccatgaagagccttggaagcgcctgcaggaaatgacaggtgca
tctcttttgcagcaaaaggccttcagaacagcagggcagcacggcaaagctgcttgctgt
gtgcgtgccccggcagtcattactgtgttccttggagctatggggctgagaaaggggaag
cagaggagccttgactcgctggaagagaacacaaaagtgtaccttctttttcctggcctt
gcagtccacacacacattacctcatttaatccctgtttttcaaggaagatagcagagtcc
ctaagagggtcaggaagttgtcaaggtcacacagctcctaaagagcagggctcctcagac
tcagctaatcaaactggcagtagccatgagtcacctcacagcccaagtgaccatgctaag
gctcccaacaaccctcacagagctcagccaacgtctgctgctgctgccctgaaggcccca
gcttctctcttctgggtttgctctcacattccagccaaccaggaatgctacccttctcag
actcgcctctatcctagtgtcacttcccacagcagacatgggaaactggaaaccaacacc
gttcattcctgtgccaagtgctttaggcgcccaataaccctacaagaggtgcggctttac
tctgagcctcctttttgctttccatacgctggaaatctaggctcttacaggtctgctctg
aaggctaaagagaatgaacagaaaagcaggtgcccaagcctgatgaattcccgtgctaaa
aaactgctgcctcctgtggagacctgtgtgtctcccacagggctgaattgccctgtgtct
gcccagcacagctctgggcacccaggtggctcctccctgggcctcagcagcagcacaaga
tgggttgtagccctgcatctctgttaa

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_9|148_aa
MADMPFKLSSDIASFAEPHRPHSEFHVLSSPSEDSVKASTEHFSYCCSPICQTSALDYEL
PEGRTHSCSPLAAQSSPVPGMKERSISCLPNEWILKYPVCSLVTQCNTLGHKISSCLKAG
AGSMHSQLESESEQLCSKARQESGTHYY

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_9|447_bp
atggcagatatgccttttaaacttagctcagacattgcttcctttgcagaaccacaccgg
ccacactcagagttccatgtgctctcttcaccctcagaggactctgtaaaagccagcacg
gagcacttctcttactgttgttcacctatttgtcagacttcagcactagactatgagctc
cctgagggccggactcactcttgttcacctttagctgctcagtccagcccagtgcctgga
atgaaagagaggtccatttcatgtttaccaaatgaatggattctgaaataccctgtctgc
tctctggttacgcagtgcaacaccttaggccataaaattagttcctgcttaaaagcagga
gcaggctctatgcactcccagttagagtcagaatctgagcagctatgttccaaggctaga
caagagtctgggacacactactactga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_10|90_aa
MAEGKEEAGTSYKARAGGKKKRGDAAAKASEETHVMDYRALVHERDEAAYGELRAMVLDL
RAFYAELYHIINSNLEKIVNPKGEKKPSMY

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_10|273_bp
atggcagaaggcaaagaggaggcaggcacttcttacaaggctagagcaggaggaaaaaag
aaacgtggggatgctgcggccaaggcctccgaggagactcatgtaatggattaccgggcc
ttggtgcatgagcgagatgaggcagcctatggggagctcagggccatggtgctggacctg
agggccttctatgctgagctttatcatatcatcaacagcaacctggagaaaattgtcaac
ccaaagggtgaaaagaagccatctatgtactga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_11|115_aa
MPQDWCGEDAVLQPLDVRNGSPSGPDYCESCCFSGSSYPLELPDSMLVLENVCKGSSDVT
CPLVFQRWVPAAADESDRFQGSSLSQTMPEFSYKKPGKTVTSTHVIIQKPFGVKF

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_11|348_bp
atgcctcaggactggtgtggtgaagacgctgtgcttcagccgctggacgttaggaatggc
agtccctcagggccagactactgtgaatcctgctgcttttctggatctagttacccactg
gagctgccagactccatgctggtgctggagaatgtttgcaagggatctagtgatgtgacc
tgtcctctagtcttccagcggtgggtaccagcagcagctgatgagagtgatagatttcag
ggttccagtctttcccaaacaatgcctgaattctcatacaagaaacctggcaaaactgtg
acttcaactcatgttataattcaaaaaccctttggtgtcaaattttga

>gi568815585f:48606818_48807855|GENSCAN_predicted_peptide_12|59_aa
MEEEQVYKIIIHYSEDFGPKFDAILAVLDFFKSSNSNDLVAKGDIENQGKFEEEKQTQL

>gi568815585f:48606818_48807855|GENSCAN_predicted_CDS_12|180_bp
atggaggaggaacaagtttacaaaattattattcattactcagaggactttggaccaaag
tttgatgcaatattggctgtgttagatttcttcaaatccagtaacagcaatgacttagta
gccaaaggagacattgaaaaccaaggcaagtttgaagaggaaaagcaaacacaattgtaa