GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:40:08

Sequence gi568815585r:26658826_26859827 : 201002 bp : 43.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6203   6337  135  0  0   91   73   123 0.927  11.64
 1.02 Intr +   8692   8845  154  2  1   37   80   138 0.779   7.03
 1.03 Intr +  13047  13164  118  0  1   29   94    74 0.711   2.57
 1.04 Intr +  17724  17899  176  2  2   51   75   115 0.609   5.24
 1.05 Intr +  23782  24149  368  1  2  105  106   226 0.963  20.89
 1.06 Term +  26863  27020  158  2  2   89   53   393 0.995  34.00
 1.07 PlyA +  27518  27523    6                              -3.64

 2.00 Prom +  28173  28212   40                              -4.56
 2.01 Init +  29633  29693   61  1  1   57   89    39 0.478   2.39
 2.02 Intr +  35273  35372  100  0  1   94   60    73 0.568   4.27
 2.03 Intr +  35959  36106  148  1  1   35  105    77 0.551   4.34
 2.04 Intr +  38021  38174  154  1  1   65   54   105 0.615   4.45
 2.05 Intr +  38544  38655  112  1  1   38    5   116 0.028  -2.26
 2.06 Intr +  49839  49915   77  0  2   84   90    73 0.245   6.26
 2.07 Term +  76774  76883  110  2  2   54   48    96 0.032   0.87
 2.08 PlyA +  77609  77614    6                               1.05

 3.02 PlyA -  78029  78024    6                               1.05
 3.01 Sngl - 101002  99998 1005  1  0   55   42  1085 0.991  97.57
 3.00 Prom - 106315 106276   40                              -5.56

 4.02 PlyA - 106715 106710    6                               1.05
 4.01 Sngl - 108856 108449  408  1  0   48   51   288 0.935  15.42
 4.00 Prom - 127214 127175   40                              -0.86

 5.00 Prom + 131974 132013   40                              -4.86
 5.01 Init + 136308 136353   46  2  1   80   94    77 0.883   8.34
 5.02 Term + 139138 139151   14  2  2  127   42    -3 0.172  -2.64
 5.03 PlyA + 140787 140792    6                               1.05

 6.05 PlyA - 140882 140877    6                               1.05
 6.04 Term - 143006 142698  309  2  0  137   34   119 0.422   6.46
 6.03 Intr - 156445 156385   61  0  1   84  101    42 0.040   3.84
 6.02 Intr - 177084 176883  202  1  1   90   63    29 0.008  -1.06
 6.01 Init - 194393 194261  133  2  1   84   11   144 0.347   5.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  38544  38659  116  1  2   38   50   125 0.839   2.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_1|369_aa
XKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSS
TVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKEK
MLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQSV
YHGASSEGSLSPDTRMLPAQIIEYYNPSGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPA
SASSTHAAPPHPPSTGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEAKRQEPA
QPPISDARSDLLAAIRMGIQLKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDS
EFDENDWSD

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_1|1110_bp
ngcaaacatgctgaagacatatttggtgagttgtttaatgaggctaacaacttctacatc
agagcaaattctcttcaagacagaattgatcgccttgctgtcaaagtcacccagctggat
tcaacagtggaagaggtctcactacaggatatcaacatgaaaaaagctttcaaaagttcc
acagtccaagaccagcaagtggtttcaaagaacagcattcctaatcctgttgctgatatt
tacaaccagagtgataagccaccgcctctgaacatcctgacaccatacagagatgacaag
aaggatgggctgaagttctatactgatccttcctatttctttgacctctggaaagaaaaa
atgctacaggacacagaagacaaaaggaaagagaaaaggcgtcaaaaggagcaaaagcgt
atagatggcaccacccgtgaggtgaaaaaggttagaaaagccagaaacaggcgccaggag
tggaatatgatggcatatgacaaagagcttagacccgacaacaggttgtctcagagtgtg
taccatggagcgtcttccgagggatccctgtccccagatactaggatgctcccagcgcag
ataattgagtattacaacccatccggaccacctcctccgccacctcctcctgtgattccc
tcagcacaaactgccttcgtcagccctctccagatgcccatgcagcccccgttccctgca
tcagccagctccacgcacgcagctcctcctcacccaccctccaccgggctcctggtcaca
gccccgccacccccgggcccaccacctcccccgccaggccctcctggtcccgggtcttct
ctttcgtcctccccaatgcatggccccccagtagctgaggcgaagcggcaagagcctgca
cagccaccaatcagtgatgctcgaagcgacctcctcgctgctattcgaatgggaattcaa
ctgaaaaaggtgcaggagcagcgggagcaggaggccaagcgggagccagtggggaatgac
gtggccacgatcctgtcccggcgcattgccgtggagtacagcgactctgacgacgactca
gagttcgacgagaacgactggtccgactga

>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_2|253_aa
MGRLPSPRWLRTQEAAEHKATRLSLPGSFLTEAVGPCGPHIALVSAVLPSSPDRSPKMPP
AMFWAIGRLMVPHGLQGDPAPSPSGAVPSSGVWLAAAETLPTKEEAGQLAAIQLLCLEAM
ALIATWRVMAGGPKGHPKADELDRRNKEQCGLFQCLLQEHARGTGSTPGACTGYWLYTRS
VHGALVLHRAEEVWKDYAVRMHKNDTVDSGNLGERVGGVEFGIVPEKRIAKISSMPFSTF
SAASPTSSWGLIL

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_2|762_bp
atgggaagattgcccagtccccgatggctgcgcacacaggaggcggcggagcacaaggca
acacgactttccttgccaggctccttcctcacagaggccgtgggtccctgtggcccccac
atcgccttggtttctgctgtccttccctcttcccccgacaggagcccgaagatgccacct
gcgatgttctgggctattggacgactaatggtgcctcatggactccagggggacccagcg
ccctctccatcaggggctgtcccttcctccggtgtctggttggcagcagctgaaaccctg
cccacaaaggaggaagctggtcagctcgcagccattcagctgctctgcctggaagccatg
gccctgattgccacttggagggtgatggctggaggcccaaaaggacacccaaaagcagat
gagcttgataggaggaacaaggaacaatgtggcctctttcaatgcctcctccaggagcat
gcacggggcactggctctacaccaggagcatgcacggggtactggctctacaccaggagc
gtgcacggggcactggttctacaccgggcagaggaggtgtggaaagactacgctgtgagg
atgcataagaatgatacagtggactctgggaacctgggggagagggtgggaggtgtggag
tttgggatagtgcctgaaaagcgcatcgccaagatcagcagcatgcctttctcaacattc
agcgcagcctctcccacctcctcctggggtctgatcctgtga

>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_3|334_aa
MNEDLKVNLSGLPRDYLDAAAAENISAAVSSRVPAVEPEPELVVNPWDIVLCTSGTLISC
ENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGIGLITNFVFAYLLQSEATKLVTIGLI
VASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVMLWGTSICLGLLPVMGWN
CLRDESTCSVVRPLTKNNAAILSVSFLFMFALMLQLYIQICKIVMRHAHQIALQHHFLAT
SHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTYATLLPATYNSIINPVI
YAFRNQEIQKALCLICCGCIPSSLAQRARSPSDV

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_3|1005_bp
atgaatgaagacctgaaggtcaatttaagcgggctgcctcgggattatttagatgccgct
gctgcggagaacatctcggctgctgtctcctcccgggttcctgccgtagagccagagcct
gagctcgtagtcaacccctgggacattgtcttgtgtacctcgggaaccctcatctcctgt
gaaaatgccattgtggtccttatcatcttccacaaccccagcctgcgagcacccatgttc
ctgctaataggcagcctggctcttgcagacctgctggccggcattggactcatcaccaat
tttgtttttgcctacctgcttcagtcagaagccaccaagctggtcacgatcggcctcatt
gtcgcctctttctctgcctctgtctgcagcttgctggctatcactgttgaccgctacctc
tcactgtactacgctctgacgtaccattcggagaggacggtcacgtttacctatgtcatg
ctcgtcatgctctgggggacctccatctgcctggggctgctgcccgtcatgggctggaac
tgcctccgagacgagtccacctgcagcgtggtcagaccgctcaccaagaacaacgcggcc
atcctctcggtgtccttcctcttcatgtttgcgctcatgcttcagctctacatccagatc
tgtaagattgtgatgaggcacgcccatcagatagccctgcagcaccacttcctggccacg
tcgcactatgtgaccacccggaaaggggtctccaccctggctatcatcctggggacgttt
gctgcttgctggatgcctttcaccctctattccttgatagcggattacacctacccctcc
atctatacctacgccaccctcctgcccgccacctacaattccatcatcaaccctgtcata
tatgctttcagaaaccaagagatccagaaagcgctctgtctcatttgctgcggctgcatc
ccgtccagtctcgcccagagagcgcgctcgcccagtgatgtgtag

>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_4|135_aa
MLVNTSLLALAFRALVPISWCSDASDIQAKRGSQDSTKRHSQQLLPMLLQMPVSSLTRAS
LNGPAGFQLSSFAHDLDESAMTAVSQSWCKESARDQSSSPLDVGPRPRAASKRPLRIFAM
TSTGKNSRSRFLRFY

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_4|408_bp
atgctggtcaacacctccctgctggccttggccttcagggcactggtgcccatctcctgg
tgctctgatgcgtctgatattcaggctaagagagggtctcaggattccaccaagaggcac
agtcaacagcttctccccatgctgttgcaaatgcctgtgtccagccttacccgagcatcc
ctgaatggtccagccggctttcagctgtcatcttttgcccatgacctcgatgaatctgcc
atgacagctgtcagtcaaagttggtgcaaggaatcagccagggatcagtcatcctcccct
ttggatgtagggcccaggcctagagcagccagcaaaaggcctttgagaatatttgcaatg
acatcaacaggaaagaactccagaagcagattcctgaggttttactga

>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_5|19_aa
MGRTGASRYLVKRETGVSH

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_5|60_bp
atggggaggacaggtgcaagccgctacctggtgaagcgggagacaggtgtctcccattga

>gi568815585r:26658826_26859827|GENSCAN_predicted_peptide_6|234_aa
MKALMTCGWLLPGAIPRACPATMGKVCLYHRSPERTSIVKYPENELVATRKRQNWCATTE
PSSQEVLLIPFLFLRPLPSCDNKPRTTCWVKYLGHSYIAVPQPAAKQPLSCKKRTQNPRK
QPKQLGEYKDKNGRPLQLRPLMSNMCQKANKSPHKVTEKHLPSQPKLPLPTPALAHAHQV
NPVLTAEPTAVSPNPLALLTLLMESAGVLRASNQMDLCQFRETPSHCTSAPNSP

>gi568815585r:26658826_26859827|GENSCAN_predicted_CDS_6|705_bp
atgaaggctctcatgacctgcggctggctgcttcctggtgcaattcctcgggcctgccct
gccaccatgggaaaagtgtgcctgtatcatcgatcaccagaaagaacatccattgtgaaa
tatccagagaatgaactggtggccaccagaaagaggcagaattggtgtgctaccaccgaa
cctagctctcaggaggtcttgctcatcccctttctctttcttagacccttgcctagctgc
gataacaagcccaggacaacctgctgggtgaaatacttgggacacagttatatcgcagtg
ccccagccagcagcgaagcaaccactgtcatgcaagaagagaacacaaaaccccaggaag
cagccaaagcagcttggagaatacaaggataagaatggaaggcccctgcagctgagaccc
ctgatgtcaaacatgtgccaaaaagccaacaaaagcccccacaaagtcacagaaaaacat
ctcccatcacagcccaaactgccactgcctactccggctcttgcccatgcccaccaggtc
aaccctgtgctgaccgctgagcccactgctgtaagcccaaaccctctggcattgctgacg
ctgctcatggaatctgctggagtcctcagggcatcaaatcagatggatctttgccaattc
agggagactccttctcactgtaccagtgcccccaattcaccatga