GENSCAN 1.0	Date run:  6-Nov-116	Time: 01:49:00

Sequence gi568815586f:116811038_117128169 : 317132 bp : 46.81% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    920   1015   96  0  0   72   93    91 0.916   7.98
 1.02 Intr +   5353   5471  119  2  2   27   64    39 0.007  -4.42
 1.03 Intr +   7787   7906  120  1  0   59  110    30 0.031   2.99
 1.04 Intr +  22755  22904  150  2  0  119  100   217 0.999  26.36
 1.05 Intr +  24923  24988   66  1  0   96  109    69 0.995   8.90
 1.06 Intr +  25144  25245  102  0  0   72   99   118 0.992  11.67
 1.07 Intr +  38277  38402  126  2  0   84   43   138 0.520   9.78
 1.08 Intr +  41544  41667  124  2  1   11   89   145 0.426   7.06
 1.09 Intr +  48262  48293   32  2  2  128   87    -9 0.352   0.85
 1.10 Intr +  48695  49019  325  1  1   59   54   160 0.669   5.05
 1.11 Intr +  51575  51662   88  0  1   57   97    44 0.386   1.23
 1.12 Term +  68921  69014   94  2  1  127   49    50 0.033   2.30
 1.13 PlyA +  69157  69162    6                               1.05

 2.02 PlyA -  69633  69628    6                               1.05
 2.01 Sngl -  70270  69995  276  1  0   70   49   254 0.405  13.70
 2.00 Prom -  71914  71875   40                              -2.96

 3.00 Prom +  86583  86622   40                              -5.86
 3.01 Init + 100001 100318  318  1  0   79  105   427 0.753  40.84
 3.02 Intr + 116986 117090  105  0  0  129  110    32 0.975   9.91
 3.03 Intr + 134327 134491  165  1  0  102   86   178 0.958  19.16
 3.04 Intr + 138581 138669   89  1  2  105   86    85 0.841   8.77
 3.05 Intr + 153660 153817  158  0  2   71  115   203 0.748  20.95
 3.06 Intr + 174169 174365  197  2  2   80   93   206 0.996  19.43
 3.07 Intr + 177626 177832  207  1  0   85   81   119 0.750  10.17
 3.08 Intr + 199114 199242  129  0  0   43   70   106 0.704   5.19
 3.09 Intr + 199286 199413  128  1  2  100   94   125 0.784  13.78
 3.10 Intr + 213110 213283  174  2  0   78   90   269 0.753  25.15
 3.11 Intr + 216357 216467  111  0  0   88   88   182 0.985  17.69
 3.12 Term + 216991 217135  145  1  1  133   50   168 0.999  14.88
 3.13 PlyA + 217988 217993    6                               1.05

 4.05 PlyA - 218583 218578    6                              -0.45
 4.04 Term - 219166 219096   71  2  2   58   49    67 0.127  -2.10
 4.03 Intr - 222102 221907  196  0  1   55   37    89 0.204  -0.51
 4.02 Intr - 222345 222158  188  1  2  113   91   103 0.648  12.51
 4.01 Init - 227084 226991   94  2  1  100   69    63 0.569   6.32
 4.00 Prom - 227496 227457   40                              -6.26

 5.18 PlyA - 227916 227911    6                               1.05
 5.17 Term - 228173 228096   78  2  0  109   46    92 0.983   4.86
 5.16 Intr - 230957 230910   48  2  0  112   98   135 0.944  15.78
 5.15 Intr - 235629 235522  108  0  0   72   89   241 0.996  23.08
 5.14 Intr - 235801 235704   98  2  2   86   11   188 0.931  10.63
 5.13 Intr - 238121 237982  140  1  2  110   38   366 0.945  33.91
 5.12 Intr - 245849 245769   81  1  0   25   80   203 0.005  11.95
 5.11 Intr - 248044 247923  122  1  2   93  105   -56 0.005  -4.11
 5.10 Intr - 249825 249666  160  2  1   60   80   136 0.863   9.99
 5.09 Intr - 250368 250157  212  0  2  100   45    69 0.529   1.51
 5.08 Intr - 254253 254145  109  2  1  115   33    28 0.188   0.29
 5.07 Intr - 264303 264234   70  1  1   74  103    70 0.749   5.34
 5.06 Intr - 270002 269752  251  1  2   60   44   168 0.092   6.68
 5.05 Intr - 273913 273867   47  1  2   83   75    16 0.231  -2.99
 5.04 Intr - 284446 284346  101  2  2   83   86    30 0.914   2.13
 5.03 Intr - 288062 287889  174  0  0   60   51   118 0.967   5.21
 5.02 Intr - 288433 288188  246  2  0    4   68   225 0.779   9.53
 5.01 Init - 288933 288855   79  0  1   74   57   115 0.540   6.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  17104  17038   67  1  1   77  110    87 0.936   9.17
S.002 Term + 117318 117383   66  2  0   81   49    65 0.859  -0.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:116811038_117128169|GENSCAN_predicted_peptide_1|480_aa
XIYPRVSEFTGSNSDASSVYMTDDVTWLQEEPAWPQGLCQLAPGTIAPEAIAASSSPSSP
EEQREDLYRKLGWSVMWNRTQHCGGTPQVGPLPLFTPEQGGTGVKVQRFGVQGKFYLVIE
ELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALKLL
CTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR
SVAVDTLRCWKDGATSAHFQEKPKGSNRNFCNWFLSERSSCLQMLLKGHKKLELEKIDES
AGGQHAPTTILKGYLGKHKERILKGRQKEIQLPACSSTERLYILKDLVIYSKAYGGIIPI
SAASTLTNVDPTAGFLELYSKACGGIIPISAASTLNMDPTAGVLELERCLLTSLLDPLSI
GKRKFSKVDCEDGCKILCILLIIDLYTLKSAPRYSRIQSSKTMLTLCASSKRLAQCQAHS

>gi568815586f:116811038_117128169|GENSCAN_predicted_CDS_1|1443_bp
nctatataccctcgggtgagtgagttcaccgggtcaaactctgatgcctcttctgtgtac
atgactgatgatgttacctggctccaggaggagcccgcctggccccaaggactctgccag
ctggcccctgggaccatagcaccagaggcgatcgcggcctcctcctccccctcctcgcca
gaagagcagagagaggatctttataggaaattggggtggtctgtcatgtggaacaggacc
cagcattgcgggggcacgccgcaagtgggaccgttaccactgtttacaccagagcaagga
ggaactggggtaaaggtgcagaggtttggggtacagggaaagttctatctggtcatcgag
gagctgagccagctgttccgatcccttgtccccatccagctgtggtacaaatacatcatg
ggtgacgactcctccaacagctacttcctgggcggggtcctgatcgttctctacagcctc
tgcaagtccttcgacatctgtggacgtgtgggcggagttaggaaagccctgaagcttctc
tgtacctctcagaactatggagtccgagccaccgggcagcagtgcacagaagctggtgac
atctgcgccatctgtcaggccgagttccgagagcctctgattctcctgtgccagcacgtg
ttctgtgaggagtgcctctgcctgtggctggaccgtgagcgcacctgcccgctctgccgc
tcggtcgccgtggacaccctgcgctgctggaaggacggcgccacgtccgcacacttccag
gaaaaaccaaagggaagcaacaggaacttctgcaactggtttttatcggaaagatcatcc
tgcctgcagatgctgttgaaggggcacaagaaattggagctggagaagattgatgaaagt
gcaggtggtcagcatgcccccactacgatcttgaagggctatttaggaaaacacaaggaa
cggattttaaaaggaagacagaaagaaatccagctcccagcttgcagcagcactgagagg
ttgtacattctaaaggacctggtcatttacagcaaagcctatggagggataattcccatt
tcagccgcatccaccttaacaaatgtggatcccactgctggcttcttagaactgtacagc
aaagcctgtggggggataattcccatttcagccgcatccaccttaaacatggatcccact
gctggcgtcttagaactggagcggtgtctgctaaccagcctgctggaccctctgtctata
gggaaacgaaaattttccaaagttgactgtgaagatggctgcaaaattctatgtatactc
ctcatcattgacttgtacaccttaaaaagcgctcctcgctactccaggatccagagtagt
aagacgatgcttacgctgtgtgcttcctcaaagcgcctagcacagtgccaggcgcacagc
tag

>gi568815586f:116811038_117128169|GENSCAN_predicted_peptide_2|91_aa
MCPCPLHRGRGPPAVCACSAGRLGLRSSAAQLTAARLKALGDELHQRTMWRRRARSRRAP
APGALPTYWPWLCAAAQVAALAAWLLGRRNL

>gi568815586f:116811038_117128169|GENSCAN_predicted_CDS_2|276_bp
atgtgcccgtgccccctgcaccgcggccgcggccccccggccgtgtgcgcctgcagcgcg
ggtcgcctggggctgcgctcgtccgccgcgcagctcaccgccgcccggctcaaggcgcta
ggcgacgagctgcaccagcgcaccatgtggcggcgccgcgcgcggagccggagggcgccg
gcgcccggcgcgctccccacctactggccttggctgtgcgcggccgcgcaggtggcggcg
ctggcggcctggctgctcggcaggcggaacttgtag

>gi568815586f:116811038_117128169|GENSCAN_predicted_peptide_3|641_aa
MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPEVGSGRGEQASGDPALAQRLL
EGAGRPPAARATRAEGQDVASRSRSPLAREGAGGGEQLVDQLIRDLNEMNDVPFFDIQLP
YELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLI
FQECRAKEHMLRTNWKNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTW
DYVAPFLESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDA
RIQALALSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVA
VAAAGDLMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKPCPYTIS
NLKKIRKLSGRTSSRELSDKDHALHDGEMKVFDVGLILVYSLEAGRRLLKLGNVLRDFTC
VNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLV
SVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGLIR
AYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV

>gi568815586f:116811038_117128169|GENSCAN_predicted_CDS_3|1926_bp
atggacgactacagcctggatgagttccgtcggcgctggcaggaggagctggcgcaggcc
caggcgccgaagaagcggcgacggcccgaggctgccgagaggcgggctcggcggccggag
gtgggctccgggcgcggcgaacaggcctcgggggacccggcgctggcccagcgtctcctg
gagggcgcggggaggcccccggcggcgcgggcgactcgggccgaggggcaggacgtagcg
agccgctcacgttctcctctggcccgcgagggcgccgggggcggggagcagctggtggac
cagctcatccgcgacctgaatgaaatgaatgatgtgcctttctttgatatccaactgcct
tacgaattggcaatcaatatatttcagtatctggacaggaaagaactaggaagatgtgca
caggtgagcaagacgtggaaggtgattgcagaggatgaggtgctgtggtacaggctgtgc
cagcaggaagggcaccttccggatagcagcatctctgactattcttgctggaagctcatc
ttccaagagtgccgagccaaggaacacatgttacgaaccaactggaagaatcgcaaaggt
gccgtgagcgagctggagcatgttcctgacacagttttgtgtgatgtgcattctcacgat
ggtgtggtcattgcgggatatacatcaggggatgtgagagtgtgggacacccgcacctgg
gactacgtagcccccttcctggaatcagaggacgaggaggatgagcctggaatgcagcca
aatgtctcctttgtgaggataaacagctcgttggcagtagcagcttatgaggatgggttt
cttaatatttgggatttaaggaccggaaagtaccctgttcatcgttttgagcacgatgca
agaatacaggcactagccctcagccaggacgatgcaaccgtggccacagcttctgctttt
gatgtcgtgatgttatcccccaatgaggaggggtactggcagatagctgcggaatttgaa
gttccgaaactggttcagtaccttgaaatagttccagaaaccagaaggtaccctgtggca
gtagccgctgctggagatctgatgtacctgctcaaagccgaagactccgccagaaccctc
ctttacgcccacggcccgcctgtcacatgtctagacgtctcggccaaccaagttgctttt
ggtgtacagggtctgggatgggtgtacgaaggaagcaagccatgtccctatactatcagt
aacctgaaaaagatcaggaaattaagtggcagaacatcttcacgggagctcagtgataag
gatcatgccctccacgatggtgaaatgaaagtatttgatgtcggcctgatcctggtgtat
agcctggaagcaggacgccgcctcttgaagctgggtaacgttctccgtgacttcacgtgt
gtcaacctcagcgacagccctcccaacctcatggtcagtggcaacatggacgggagggtg
aggatccacgacctccgcagtggtaacatcgccctgtcgctctccgcccatcagctcagg
gtctctgctgtgcagatggatgactggaagatcgtcagtggaggcgaggaaggcctggtg
tccgtgtgggattatcggatgaaccagaagctgtgggaggtgtattccgggcacccggtg
cagcacatctcattcagcagccacagcctcatcacggccaacgtgccttaccagacggta
atgcgaaacgccgacctggacagcttcactactcacaggagacaccgggggctgatccgc
gcctatgagtttgcggtggaccagctggccttccagagccctctccctgtctgccgttca
tcctgtgacgccatggccactcactactacgacctcgcactggcctttccctataaccat
gtttag

>gi568815586f:116811038_117128169|GENSCAN_predicted_peptide_4|182_aa
MAVPLALSGSPGPVAGPRALQPSSKQRQWKLGKDTAPSAEQSNGCFWKPTLGIRGRKWAG
DNMAPARAQQEGICHRTLEAALVQVATGPCSGSQHLGPAGQRRELTAAAAAAQSEGSVRQ
WETALLEPLWWPAWNSRGTVVTRRLDPHQGKPFLSNCKQIGDEYGMAAYLKQSEKPSRTF
MT

>gi568815586f:116811038_117128169|GENSCAN_predicted_CDS_4|549_bp
atggctgtgcccctggctctttctggcagtcctgggccagttgcagggcccagggcccta
cagccttccagcaagcagcggcagtggaagctgggaaaagacacggcccccagtgcagag
cagtcaaatggctgcttctggaagcccacgctgggcatcagaggccgaaagtgggctggg
gacaacatggcacccgccagagcccagcaagagggaatctgccatcgcacattagaggca
gcccttgtccaagtcgccacaggcccctgcagcggtagccagcacctcggcccggccggc
cagcgccgtgagctcactgctgctgcagctgctgctcagagcgaaggctccgtcaggcag
tgggagacggccctgttggagcccctgtggtggcccgcctggaatagccgcgggacagtt
gttacgagaaggctggaccctcaccaggggaagccgtttctcagcaactgtaaacaaatt
ggagatgaatatggaatggctgcgtatcttaagcaatctgaaaaaccttccagaaccttc
atgacgtga

>gi568815586f:116811038_117128169|GENSCAN_predicted_peptide_5|707_aa
MRPARSCSLRCLSATGLCRAHTGRHVGPRRAALRRYMRPRSGPTRNPRLRAFAGVPTRGR
TRGQSRRCAAEASAGPERDARPGAPAAGTMGAAHSASEEVRELEGKTGFSSSFKWVPAGH
LAGCGEELRGDAQCRSRSASDWPGNSLAGGLRTGEGAGPRLPKRRAGLCTKAVPLPGALF
SFDVYNQVFTYGSLSLSPPRQAPSKPEVLRGPCKHRLKSKTRNNEVQLPGTKAHSAHHPH
GNCDLRALEKGSEVRSKETGKATNPGALEEKAGPSVGFGALMQADMHQVLMRGALLGAQV
SSDQIEQLHRRFKQLSGDQPTIRPCPHPAAMVSGLGYPNSLLPGSPVSVFTVHPPSRLTG
LDTWALGKAPGEGQCLRMGQTKREALRAAIFIIRFIIRSANHLLTTLPSPAVQGTEDGVL
WTSQGPHPARFPLELHVVPFSGIWALENGFYSDGQGESGSRVSGKSMAVRYLASKLTLPC
PHWWADTLCLPYLGLTPFSLGSPACVLGPSQDTARGGPWSRRKSKENFNNVPDLELNPIR
SKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLF
HMYDSDSDGRITLEEYRNVKYAPLARPGLLVVEELLSGNPHIEKESARSIADGAMMEAAS
VCMGQMEPDQVYEGITFEDFLKIWQGIDIETKMHVRFLNMETMALCH

>gi568815586f:116811038_117128169|GENSCAN_predicted_CDS_5|2124_bp
atgcgcccagcccgctcctgcagtttgaggtgcctctcagccaccgggctgtgcagggcc
cacacgggccgccacgtgggaccgcggcgcgccgccctccgccgttatatgaggccccgc
tccggccccacgcggaacccgcggctccgagccttcgccggcgtcccgacccgaggccgg
acccgaggccagtcccgccgctgcgcagccgaagccagtgcggggcctgagagggacgcg
cgccccggggcccccgccgcgggcaccatgggcgctgcccactccgcgtctgaggaggtg
cgggagctcgagggcaagaccggcttctcctcctctttcaaatgggtccccgctggccac
ctcgcgggctgcggcgaggagctccgcggcgatgctcagtgccgcagccgctcagcttcg
gactggcccgggaactccctggccgggggactgcggaccggggagggagcggggcccagg
cttcccaagcgcagggcaggcctttgcacaaaagctgttcctctgcctggagcactgttt
tcatttgatgtgtacaatcaggtgtttacgtacgggagcctttctctgtctccacccagg
caagcacctagcaaaccagaggtgctcagagggccatgcaagcacaggttgaaatctaaa
accagaaataatgaggtccagctgccaggaaccaaagcccattctgcccatcatccgcat
ggcaactgtgacctcagggccctggagaagggctcagaggtgaggagcaaggaaactgga
aaagctaccaacccaggagcccttgaggaaaaggcaggtccttccgtgggctttggggcc
ctgatgcaggcagacatgcatcaggtgcttatgcgaggggccctgttgggggcccaggtc
tcatcggatcagatcgagcagctccatcggagatttaagcagctgagtggagatcagcct
accattcgcccctgccctcatccagctgccatggtctctggcctgggctaccccaacagc
ctcctccctggttcccctgtgtctgtcttcactgtccatccaccatccaggctcacgggt
ctggacacctgggccctggggaaggcacctggggaagggcagtgcctcaggatgggccag
acaaagagggaagccctgcgtgcagccatcttcattattcgcttcattattcgctcagca
aaccatttattgaccaccttgccaagcccagcagtgcaaggcactgaggacggggtgctg
tggacatcacagggtccccatcctgcaagattccctctggagctccacgtggtccctttc
tcagggatctgggccttggaaaatggattctattcggatggccagggagagtcgggcagc
agggtatctggtaagagcatggctgtacgctacctggcttccaagctgactcttccatgc
ccccactggtgggctgataccctctgccttccctacctgggcctgacacctttttcccta
ggatcaccagcctgtgtgctgggtccttcccaagacactgcccgtggaggcccatggagc
agaaggaaaagcaaggagaacttcaacaatgtcccggacctggagctcaaccccatccga
tccaaaattgttcgtgccttcttcgacaacaggaacctgcgcaagggacccagtggcctg
gctgatgagatcaatttcgaggacttcctgaccatcatgtcctacttccggcccatcgac
accaccatggacgaggaacaggtggagctgtcccggaaggagaagctgagatttctgttc
cacatgtacgactcggacagcgacggccgcatcactctggaagaatatcgaaatgtaaag
tatgctcctctggcccgcccggggctcctggtggtcgaggagctgctgtcgggaaaccct
cacatcgagaaggagtccgctcgctccatcgccgacggggccatgatggaggcggccagc
gtgtgcatggggcagatggagcctgatcaggtgtacgaggggatcaccttcgaggacttc
ctgaagatctggcaggggatcgacattgagaccaagatgcacgtccgcttccttaacatg
gaaaccatggccctctgccactga