GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:43:03

Sequence gi568815586r:111544202_111785792 : 241591 bp : 46.31% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3668   3760   93  0  0   91   94    47 0.750   5.54
 1.02 Term +  26888  26901   14  0  2  121   47     2 0.014  -2.24
 1.03 PlyA +  28416  28421    6                               1.05

 2.00 Prom +  31529  31568   40                              -3.06
 2.01 Sngl +  37066  37617  552  0  0   28   39   515 0.707  36.72
 2.02 PlyA +  37722  37727    6                               1.05

 3.04 PlyA -  43656  43651    6                               1.05
 3.03 Term -  48244  48206   39  1  0   79   49    49 0.471  -2.71
 3.02 Intr -  53792  53711   82  1  1  104   68    76 0.915   6.84
 3.01 Init -  54833  54583  251  2  2   86   94   523 0.601  49.64
 3.00 Prom -  59903  59864   40                              -5.96

 4.08 PlyA -  60830  60825    6                               1.05
 4.07 Term - 100361  99998  364  1  1   74   43   507 0.995  38.84
 4.06 Intr - 105841 105738  104  1  2  103   56    94 0.960   6.67
 4.05 Intr - 111454 111365   90  1  0   72  100    60 0.980   5.79
 4.04 Intr - 114644 114535  110  0  2   58   94    88 0.999   6.40
 4.03 Intr - 115144 115006  139  1  1   86   53   101 0.998   6.44
 4.02 Intr - 116474 116399   76  1  1   76  100    72 0.998   6.72
 4.01 Init - 121568 121438  131  2  2   76   94   149 0.993  13.92
 4.00 Prom - 123192 123153   40                              -5.56

 5.08 PlyA - 125402 125397    6                               1.05
 5.07 Term - 125858 125649  210  2  0    5   41   171 0.318   1.39
 5.06 Intr - 128573 128460  114  2  0   63   95    94 0.493   8.24
 5.05 Intr - 135080 134950  131  0  2   64   98     7 0.716  -0.29
 5.04 Intr - 139106 138945  162  0  0   66   85   106 0.966   8.05
 5.03 Intr - 141636 141510  127  0  1   92  100   128 0.943  14.65
 5.02 Intr - 148127 148061   67  1  1  105   64     3 0.476  -1.49
 5.01 Init - 150689 150682    8  2  2  103  101     0 0.595   3.30
 5.00 Prom - 152041 152002   40                              -3.36

 6.00 Prom + 152281 152320   40                              -6.16
 6.01 Init + 155436 155487   52  2  1   82   59    35 0.781   1.35
 6.02 Intr + 157961 158109  149  0  2   69  101    30 0.823   2.35
 6.03 Intr + 161537 161731  195  1  0  102   91    99 0.965  11.21
 6.04 Intr + 165325 165483  159  0  0   77   85   137 0.999  12.48
 6.05 Intr + 168297 168456  160  2  1   40   91   125 0.997   7.56
 6.06 Intr + 171620 171761  142  0  1   84  111    70 0.999   8.31
 6.07 Intr + 177470 177538   69  2  0  105   98    55 0.988   6.50
 6.08 Intr + 183761 183942  182  2  2  107  105   172 0.999  20.31
 6.09 Intr + 185605 185755  151  2  1   90   76   115 0.782   9.72
 6.10 Intr + 189722 189867  146  2  2   80   75   142 0.999  12.03
 6.11 Intr + 192630 192803  174  1  0  127   95    41 0.976   8.61
 6.12 Intr + 200442 200842  401  1  2   69   98   181 0.717  11.42
 6.13 Intr + 201943 202083  141  0  0   69   67    93 0.964   5.85
 6.14 Intr + 202848 202985  138  2  0  113   98   161 0.990  20.26
 6.15 Intr + 203094 203184   91  2  1   87   68    70 0.973   4.47
 6.16 Intr + 204116 204274  159  0  0  109   94   170 0.994  19.66
 6.17 Intr + 204972 205144  173  1  2   70   77   111 0.995   7.86
 6.18 Intr + 209571 209714  144  2  0  107   97   251 0.631  28.38
 6.19 Intr + 211467 211544   78  2  0  117   99    43 0.996   8.05
 6.20 Term + 212132 212272  141  1  0   92   43   298 0.943  23.63
 6.21 PlyA + 218618 218623    6                               1.05

 7.00 Prom + 222302 222341   40                              -2.96
 7.01 Init + 222782 222895  114  1  0   60   99   224 0.981  18.93
 7.02 Intr + 223155 223348  194  2  2  105   45     8 0.404  -3.51
 7.03 Intr + 229273 229361   89  1  2   78   76    47 0.528   2.11
 7.04 Intr + 230577 230683  107  1  2   68   67    64 0.388   2.23
 7.05 Intr + 237717 237821  105  2  0   98  100    75 0.912  10.11
 7.06 Intr + 238957 239097  141  0  0   81  101   214 0.999  22.55
 7.07 Intr + 241066 241145   80  0  2  119   72   154 0.763  15.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_1|35_aa
XLFVEKSFNNHGTYWLGTVVHAYNPSNLGGPGEET

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_1|108_bp
nctttatttgtggagaaatcctttaacaaccatggaacttactggctgggcacagtggtt
catgcctacaatcccagcaatttgggaggcccaggggaagaaacttaa

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_2|183_aa
MSTKKPPEPEKSKLPGKGRGPLRTTPATRPQLVFPGHHEPQCPNLFTPANIGHPPNYEML
KEEQEVAVLGAPHNPAPPMSTVIPIHSENSVPDHVVWSLFNTHFMNSCCLGFIALAYSVK
SRDKKMVGDLIRAQAYAFTAKCLNIWALIVRIITTILLSIIPVLIFQVYQQIRRHYLGQE
LCP

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_2|552_bp
atgagtactaaaaaaccaccagagccagagaaatccaaactaccagggaaagggaggggc
ccactgagaaccaccccagcaacccgaccacagctggtcttccctggacaccatgaacca
caatgtccaaacctcttcactcctgccaacatcggccatccccctaactatgagatgctc
aaggaggagcaagaggtggctgtgctgggggcaccccacaaccctgctcccccaatgtcc
accgtgatccccatccacagcgagaactccgtgcccgaccatgtcgtctggtccctgttc
aacacccacttcatgaactcctgctgcctgggcttcatagcattggcctactccgtgaag
tctagggacaagaagatggttggcgacctgatcagggcccaggcctatgcctttaccgcc
aagtgcctgaacatctgggccctgattgtgcgcatcattacgaccattctgctcagcatc
atcccagtgttgatctttcaagtctatcaacagatcaggaggcattatctaggccaggag
ctctgcccgtga

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_3|123_aa
MSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVS
SSSATAPSSVVAATSGGGRPGLGRPLRRAGGGRSALLFEAAVEKAPVEHRWDIWVIYDVT
VTI

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_3|372_bp
atgtcgctgaagccccagcagcagcagcagcagcagcagcagcagcagcagcagcaacag
cagcagcagcagcagcagcagcagccgccgcccgcggctgccaatgtccgcaagcccggc
ggcagcggccttctagcgtcgcccgccgccgcgccttcgccgtcctcgtcctcggtctcc
tcgtcctcggccacggctccctcctcggtggtcgcggcgacctccggcggcgggaggccc
ggcctgggcagacctctccggcgcgcgggtggtggccgatccgcattgctgttcgaggcc
gcagtggagaaggcgcctgtggaacatcggtgggatatctgggtcatctatgatgttact
gttaccatctaa

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_4|337_aa
MDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEEN
KCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVH
RLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTA
EEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNK
CLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQ
EIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_4|1014_bp
atggacctgactgaactccccaagtgcacggtgtgtctggagcgcatggacgagtctgtg
aatggcatcctcacaacgttatgtaaccacagcttccacagccagtgtctacagcgctgg
gacgataccacgtgtcctgtttgccggtactgtcaaacgcccgagccagtagaagaaaat
aagtgttttgagtgtggtgttcaggaaaatctttggatttgtttaatatgcggccacata
ggatgtggacggtatgtcagtcgacatgcttataagcactttgaggaaacgcagcacacg
tatgccatgcagcttaccaaccatcgagtctgggactatgctggagataactatgttcat
cgactggttgcaagtaaaacagatggaaaaatagtacagtatgaatgtgagggggatact
tgccaggaagagaaaatagatgccttacagttagagtattcatatttactaacaagccag
ctggaatctcagcgaatctactgggaaaacaagatagttcggatagagaaggacacagca
gaggaaattaacaacatgaagaccaagtttaaagaaacaattgagaagtgtgataatcta
gagcacaaactaaatgatctcctaaaagaaaagcagtctgtggaaagaaagtgcactcag
ctaaacacaaaagtggccaaactcaccaacgagctcaaagaggagcaggaaatgaacaag
tgtttgcgagccaaccaagtcctcctgcagaacaagctaaaagaggaggagagggtgctg
aaggagacctgtgaccaaaaagatctgcagatcaccgagatccaggagcagctgcgtgac
gtcatgttctacctggagacacagcagaagatcaaccatctgcctgccgagacccggcag
gaaatccaggagggacagatcaacatcgccatggcctcggcctcgagccctgcctcttcg
gggggcagtgggaagttgccctccaggaagggccgcagcaagaggggcaagtga

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_5|272_aa
MPRPLSNSFFTLQSEYSLKIVNLGQPRLSPPGPAPASACPMSVSLVVIRLELAEHSPVPA
GFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAIIHQHLGRREMTDVIIETMKSN
PVPAAMTSHDLMKFVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQF
NSIEDDVCQLVYVERAEVLKSEDEQQLLMKMKIVNQRKSPEAKMKMKNIGRDTPTSAGPN
SFNKRKHGFFDNQKLWERNIKSYVGNVNDQDN

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_5|819_bp
atgcccagacctctctccaattctttcttcaccctccagtcagagtattctttaaaaatt
gtaaatctgggccagcctcgcctgagcccgccggggcccgcgccggccagcgcctgccct
atgagtgtgtcactggttgttatccgattggagctcgcggaacactcgcctgtccccgcc
ggcttcggcttcagcgccgcggccggggaaatgtctgatgaggagataaaaaagacgaca
ctagcctcagctgtagcctgtttagaaggcaagtcaccaggagagaaagtagcgattatc
catcagcatctcggccgtcgagaaatgacagatgtgatcattgagaccatgaagtccaac
ccagtccctgctgcaatgaccagtcatgaccttatgaagtttgttgccccatttaacgaa
gtaattgaacaaatgaaaattatcagagactctactcccaaccaatatatggtgctgata
aagtttcgtgcacaggctgatgcggatagtttttatatgacatgcaatggccgccagttc
aactcaatagaagatgacgtttgccagctagtgtatgtggaaagagctgaagtgctcaaa
tctgaagatgagcagcagcttttaatgaagatgaagatagtgaaccagaggaaatctcca
gaagcaaagatgaagatgaagaatattggaagggatacaccaacatcagctggaccaaac
tccttcaataaaagaaagcatgggttttttgataaccagaagctatgggagcgaaatata
aaatcttatgttggaaatgtcaatgaccaagacaattaa

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_6|1014_aa
MVDVMAYGYDPSTLGGREWEVQNRIPSGTILKALMEGGENGPWMRFMRAEITAEGFLREF
GRLCSEMLKTSVPVDSFFSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSNNFYLPNQK
SFLPLDRKQFDVIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLGTNLKEAARLG
IHTIKVNDPETAVKELEALLGFTLRVGVPNTRPVKKTMEIPKDSLQKYLKDLLGIQTTGP
LELLQFDHGQSNPTYYIRLANRDLVLRKKPPGTLLPSAHAIEREFRIMKALANAGVPVPN
VLDLCEDSSVIGTPFYVMEYCPGLIYKDPSLPGLEPSHRRAIYTAMNTVLCKIHSVDLQA
VGLEDYGKQGDYIPRQVRTWVKQYRASETSTIPAMERLIEWLPLHLPRQQRTTVVHGDFR
LDNLVFHPEEPEVLAVLDWELSTLGDPLADVAYSCLAHYLPSSFPVLRGINDCDLTQLGI
PAAEEYFRMYCLQMGLPPTENWNFYMAFSFFRVAAILQGVYKRSLTGQASSTYAEQTGKL
TEFVSNLAWDFAVKEGFRVFKEMPFTNPLTRSYHTWARPQSQWCPTGSRSYSSVPEASPA
HTSRGGLVISPESLSPPVRELYHRLKHFMEQRVYPAEPELQSHQASAARWSPSPLIEDLK
EKAKAEGLWNLFLPLEADPEKKYGAGLTNVEYAHLCELMGTSLYAPEVCNCSAPDTGNME
LLVRYGTEAQKARWLIPLLEGKARSCFAMTEPQVASSDATNIEASIREEDSFYVINGHKW
WITGILDPRCQLCVFMGKTDPHAPRHRQQSVLLVPMDTPGIKIIRPLTVYGLEDAPGGHG
EVRFEHVRVPKENMVLGPGRGFEIAQGRLGPGRIHHCMRLIGFSERALALMKARVKSRLA
FGKPLVEQGTVLADIAQSRVEIEQARLLVLRAAHLMDLAGNKAAALDIAMIKMVAPSMAS
RVIDRAIQAFGAAGLSSDYPLAQFFTWARALRFADGPDEVHRATVAKLELKHRI

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_6|3045_bp
atggtggatgtgatggcttatggctacgatcccagcactttgggaggccgagaatgggag
gtacagaatcgtatcccttctggaactatattaaaggccttgatggaaggtggtgaaaat
gggccctggatgagatttatgagagcagaaataacagcagagggttttttacgagaattt
gggagactttgctctgaaatgttaaagacctccgtgcctgtggactcatttttctctctg
ttgaccagtgagcgagtggcaaagcagttcccagtgatgactgaggccataactcaaatt
cgggcaaaaggtcttcagactgcagtcttgagcaataatttttatcttcccaaccagaaa
agctttttgcccctggaccggaaacagtttgatgtgattgtggagtcctgcatggaaggg
atctgtaagccagaccctaggatctacaagctgtgcttggagcagctcggcctgcagccc
tctgagtccatctttcttgatgaccttggaacaaatctaaaagaagctgccagacttggt
attcacaccattaaggttaatgacccagagactgcagtaaaggaattagaagctctcttg
ggttttacattgagagtaggtgttccaaacactcggcctgtgaaaaagacgatggaaatt
ccgaaagattccttgcagaagtacctcaaagacttactgggtatccagaccacaggccca
ttggaactacttcagtttgatcacgggcagtcaaatccaacttactacatcaggctggct
aatcgtgatctagttctgaggaagaagcccccagggacactccttccatctgcccatgcc
atagagagggagttcaggattatgaaagcccttgcaaatgctggagtacctgtccctaac
gttcttgatctctgtgaagattcaagtgtcattggcacccccttctatgtgatggagtac
tgcccaggtctcatctacaaagacccttccctgccaggcttggagcccagccacagacga
gccatatacactgccatgaacacagtcctgtgcaaaattcacagtgtggatctgcaggct
gtgggacttgaagactatgggaagcaaggggactatattccacgccaggtacgaacctgg
gttaagcagtatcgagcttccgaaactagcaccatcccagccatggagaggctgatcgaa
tggctgcccctccatcttccccgtcagcagaggaccacagtggtgcacggggacttcagg
ctcgacaacctggtgtttcatccagaagagccagaggtgcttgctgtccttgactgggaa
ctttctaccttgggcgacccccttgctgatgtggcctacagctgcctggctcattacctg
ccatccagttttcccgtgctgagaggtattaatgactgtgacttgacacagctgggaatc
cctgctgcagaggagtatttcaggatgtactgtctccaaatggggctccctcccactgag
aactggaacttctatatggctttttcctttttccgtgtggctgcaatcctacagggagtc
tacaagcgatcactcacagggcaagcaagctccacatatgcggaacaaactggaaagctg
accgaatttgtgtctaacctggcgtgggatttcgcagtcaaagaagggttccgggttttc
aaagagatgcccttcacaaatccgttaacaaggtcctaccacacgtgggccaggccccag
tcccagtggtgccccacaggcagcaggagttatagctccgttccagaagcttccccagct
catacctcaaggggaggtctggttatctctccagagagcctctctccacctgtcagagag
ctgtatcaccggctgaagcacttcatggagcaacgtgtgtaccctgcagagccagagctg
cagagtcaccaggcctcagcagccaggtggagcccctccccactgatcgaagacctcaag
gagaaagccaaagctgaaggactttggaaccttttcctacccttagaggctgatcccgag
aaaaaatacggagcaggactgaccaatgtggaatatgcacatctgtgtgagctcatgggc
acgtccctgtatgcccccgaggtatgtaactgctctgcgcctgacacgggcaacatggag
ctgctggtgaggtatggcaccgaagcgcagaaggctcgctggctgattcctctgctggag
gggaaagcccgctcctgttttgctatgaccgagccccaggttgcctcttcagatgccacc
aacattgaggcttccatcagagaggaggacagcttctatgtcataaacggtcacaaatgg
tggatcacaggcatcctggatcctcgttgccaactctgtgtgtttatgggaaaaacagac
ccacatgcaccaagacaccggcagcagtctgtgctcttggttcccatggataccccaggg
ataaaaatcatccggcctctgacggtgtatggactggaagatgcaccaggtggccatggt
gaagtccgatttgagcacgtgcgtgtgcccaaagagaacatggtcctgggccctggccga
ggctttgagatcgcccagggcagactgggccccggcaggatccatcactgcatgaggctg
atcgggttctcagagagggccctggcactcatgaaggcccgcgtgaagtcccgcttggct
tttgggaagcccctggtggagcagggcacagtgctggcggacatcgcgcagtcgcgcgtg
gagattgagcaggcacggctgctggtgctgagagctgcccacctcatggacctggcagga
aacaaggctgcagccttggatatagccatgattaaaatggtcgccccgtccatggcctcc
cgagtgattgatcgtgcgattcaggcctttggagcagcaggcctgagcagcgactaccca
ctggctcagttcttcacctgggcccgagccctgcgctttgccgacggccctgacgaggtg
caccgggccacggtggccaagctagagctgaagcaccgcatttag

>gi568815586r:111544202_111785792|GENSCAN_predicted_peptide_7|277_aa
MLRAAARFGPRLGRRLLSAAATQAVPAPNQQPEVFCNQGQLSGFRSPHGPCFRVSAGSPP
SPTQKTRPSPSLQELSCLFLSHPLYPLTHALIQGVQKEKPGKRPSTEDFYLHFTFHPTRN
SISLVVLLSRLAGPVVLLWALTLPQLLSPSTTTITTKSLPGMENKIAKIFINNEWHDAVS
RKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLAD
LIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLR

>gi568815586r:111544202_111785792|GENSCAN_predicted_CDS_7|831_bp
atgttgcgcgctgccgcccgcttcgggccccgcctgggccgccgcctcttgtcagccgcc
gccacccaggccgtgcctgcccccaaccagcagcccgaggtcttctgcaaccagggccaa
ctctcggggttccgttctccccatggtccttgctttcgggtctccgcagggtccccaccc
tcacccactcagaagacgcgaccaagtccctctttgcaggaactttcctgtcttttcctt
agtcatcccctttaccccctgactcatgccctcatccaaggagttcaaaaggaaaaacca
ggaaagaggccctctactgaggacttctacctgcatttcacctttcatcctacccgcaac
tctataagcctggtagtattgctgtcccgtcttgcgggtccagttgtcctgctctgggca
ctgaccctgccccagctcctgagcccctcgaccaccacaatcaccactaagtctctgcct
ggcatggagaacaagatagccaagattttcataaacaatgaatggcacgatgccgtcagc
aggaaaacattccccaccgtcaatccgtccactggagaggtcatctgtcaggtagctgaa
ggggacaaggaagatgtggacaaggcagtgaaggccgcccgggccgccttccagctgggc
tcaccttggcgccgcatggacgcatcacacaggggccggctgctgaaccgcctggccgat
ctgatcgagcgggaccggacctacctggcggccttggagaccctggacaatggcaagccc
tatgtcatctcctacctggtggatttggacatggtcctcaaatgtctccgn