GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:43:42

Sequence gi568815586f:25703298_25904526 : 201229 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    953   1090  138  1  0   65   44   157 0.961   5.98
 1.02 PlyA +   1207   1212    6                               1.05

 2.11 PlyA -   1325   1320    6                               1.05
 2.10 Term -   4516   4175  342  1  0   96   44   150 0.773   4.93
 2.09 Intr -   7899   7713  187  2  1  108   92   125 0.990  13.67
 2.08 Intr -   9208   9055  154  2  1   60   56    51 0.085  -2.69
 2.07 Intr -  15304  15137  168  2  0   59   62    78 0.084   1.30
 2.06 Intr -  27871  27799   73  1  1   39   64    68 0.102  -2.44
 2.05 Intr -  32172  31971  202  2  1  103   82   107 0.328   9.97
 2.04 Intr -  47966  47931   36  1  0   75   99    47 0.004   0.96
 2.03 Intr -  59796  59663  134  0  2    2   47   134 0.003  -0.78
 2.02 Intr -  73999  73828  172  0  1   75   54   118 0.086   6.12
 2.01 Init -  90006  89957   50  0  2   55   61    47 0.031  -0.83
 2.00 Prom -  90791  90752   40                              -3.45

 3.03 PlyA -  92389  92384    6                               1.05
 3.02 Term -  94822  94676  147  1  0  122   40   106 0.945   6.12
 3.01 Init -  98484  98398   87  0  0   59  100    63 0.685   5.29
 3.00 Prom -  98809  98770   40                              -4.55

 4.00 Prom +  99505  99544   40                              -5.95
 4.01 Init +  99848 100320  473  1  2   36    8   307 0.699  12.54
 4.02 Term + 100716 101232  517  0  1    4   48   485 0.955  28.90
 4.03 PlyA + 103484 103489    6                               1.05

 5.07 PlyA - 103742 103737    6                              -0.45
 5.06 Term - 104860 104614  247  0  1   78   55   136 0.407   3.58
 5.05 Intr - 111253 111156   98  1  2   82   76    26 0.183  -1.31
 5.04 Intr - 116837 116553  285  2  0  -21   37   223 0.013   2.91
 5.03 Intr - 123671 123546  126  2  0   69   71    95 0.029   5.86
 5.02 Intr - 130769 130652  118  1  1   35  106    76 0.053   3.65
 5.01 Init - 158929 158847   83  1  2   74   71    92 0.343   6.59
 5.00 Prom - 159048 159009   40                              -6.65

 6.00 Prom + 162578 162617   40                              -5.45
 6.01 Init + 171126 171135   10  2  1   79   97     5 0.284   1.35
 6.02 Intr + 171867 171924   58  1  1   45  110    25 0.356  -2.58
 6.03 Intr + 172085 172268  184  2  1   25   47   236 0.430  12.07
 6.04 Term + 179792 179932  141  1  0   78   44   107 0.193   2.25
 6.05 PlyA + 180589 180594    6                               1.05

 7.04 PlyA - 180716 180711    6                               1.05
 7.03 Term - 181647 181313  335  1  2   47   47   176 0.843   3.19
 7.02 Intr - 181850 181674  177  0  0   70   81   120 0.634   8.47
 7.01 Init - 182368 182332   37  1  1  114   55    51 0.664   4.66

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_1|45_aa
HFLVHTSTVLDREAHWNEVEETGVDADPSPEITSEVPEKDKDCLD

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_1|138_bp
cacttcttagttcacactagcaccgtactagacagagaagctcactggaatgaagtggag
gagactggagtggatgcagatcccagtccagagattacttcagaagtccctgagaaagat
aaggactgcttggattaa

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_2|505_aa
MSLTPRSCQQQQLMLSKLSVRAGFKPEPDFKAIFHCALLPSPEMMPNTCATYWHLQFIRL
LASSQGSSQGVKAANCKQKQGDTSTHLSEWLKFRTLTTPNADKNMEQELSFIAGGNAKWI
CDWEDDSVLDRNYVLKVLEIEKACNHGDNFVLISYNTSNEEQVEGDEKSKKRRKNNLIQQ
IFIKYFACISLLDAGDKEPTVEYITDLVLSGSPVYVQPMRGTGTGEAPPCCKRSELPEAP
PHPPSVKASWRFPEDLPPYLPPASITTKRIRTRISTGLAFIDGLRVRQACCTMRVSKQQE
PEHSVSKSWLYNCMILGNSLNFSVFQFHYLCGLAIVPNAWSTLSAESKDCLAERSFVSVL
TFLRGTDYLFLTESHGHLDKENKRIVHFTSNIGTFVQRVGSQGLRQLHSCGFSEYSLHSC
LHGLEVSTCSFSRYKVQAAGGFTILGPGGHQPSSHSFTRQCPIGDSVWGSKPTFSRHMAV
VEVVCGSSTPTAGFYLGTQALSHIL

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_2|1518_bp
atgagtctgacaccaagaagttgtcagcagcagcagctaatgcttagcaaattaagtgtc
agagcaggatttaaacccgagcctgacttcaaagccatcttccactgtgctttgctgcct
tcacctgagatgatgccaaatacctgtgccacatactggcacctgcagtttattaggctg
ttggcatctagtcaaggatcctcacagggtgttaaagcagcgaattgcaaacaaaaacaa
ggagacaccagtacacacctatcagaatggctaaaattcagaacactgacaacaccaaat
gcagacaagaatatggaacaagaactctcattcattgctggtggaaatgcaaaatggatt
tgtgattgggaagatgacagtgttcttgacaggaactatgttctgaaggttctagaaata
gaaaaagcctgcaatcatggtgataactttgtgctcatttcttataacacttctaatgaa
gagcaagtggaaggagatgagaagtctaagaagagaagaaagaataatttgattcagcaa
atatttattaaatattttgcatgtatctctcttctagatgctggagataaagagcctact
gtggagtacattactgatcttgtgctctctgggtctccagtgtatgttcagccaatgagg
ggcactggaacaggagaggctcctccctgctgtaaacggagtgaacttcctgaggctcca
ccccatcctcccagtgtgaaggctagttggagattccctgaagaccttcccccttatctg
cctcctgcatctatcaccactaagcggattagaacaagaattagcactggacttgctttt
attgatggtctccgtgtgcgacaagcttgttgcaccatgagagtgtctaagcaacaagag
ccagaacacagtgtttcaaaatcttggctctacaattgtatgatcttgggtaactcactt
aacttctctgtgtttcagtttcattatctgtgtggccttgccattgttccaaatgcatgg
agcaccctttctgcagaaagcaaagattgccttgctgagaggtcctttgtctccgtgctg
acttttcttcgtggcaccgattatctatttctaacagagagtcatgggcatttggacaaa
gaaaataaaaggattgtgcatttcacatcaaatataggaacatttgtacaaagggtgggc
tcccaaggtcttaggcagctccactcctgtggtttttcagagtatagcctgcacagctgc
cttcatgggttagaggtgagtacctgcagcttttccaggtacaaggtgcaggctgctggt
ggatttaccattctggggcctggaggacatcagccttcttcccacagcttcacaagacag
tgccccattggagactctgtgtggggctccaaacccacattttcccgccacatggctgta
gtagaggtggtctgtggaagctccacccctacagcaggcttctacctaggcacccaggct
ctgtcacacatcctctga

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_3|77_aa
MLQQAQRTKKQLQQETAELGSEIPALTKKDALLLIKGMKTSGRGSRCVAAPLKILVKYKS
LLPFLKQLQQLFSPENE

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_3|234_bp
atgctgcaacaggcacagagaacaaagaaacaactgcaacaagaaactgctgaacttggg
tctgaaatcccagcattaacaaaaaaggatgctctcctacttatcaagggaatgaagaca
agtggacgtgggtcccgctgtgttgcagcacctttgaaaatacttgtgaaatataaatca
ttgcttccatttctgaagcaattgcaacaactctttagcccagagaatgagtag

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_4|329_aa
MVSSFDPSCRIKSQQVRSLGLSYRSEYHAVLQRPAARVPGRWSCPHQRPRGMEAENAGSY
SLQQAQAFYTFPFQQLMAEAPNMAVVNEQQMPEEVPAPAPAQEPVQEAPKGRKRKPRTTE
PKQPVEPKKPVESKKSSKSAKSKEKQEKLQTHLKSKENKEVFGVKVKNLEFGLQPHKIPG
TETLCYVMPSSSARSAQFPRAQDKVHYYIKLKDLRDQLRGIERNTDVQEVQYTFDLQLAQ
EDAKKMAVKEEKYDLGYEAAYGGAYGENPCDSEPCSFSSNGLIESLELRGESTFSGIPNE
QWMTQSFTDQIPSFNNHCGTQEQEEESHA

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_4|990_bp
atggtgagcagttttgacccatcatgtaggataaaaagtcaacaggtgaggtctctgggg
ttgtcttaccgcagtgagtaccacgcggtactacagagaccggctgcccgtgtgcctggc
aggtggagctgcccgcatcagcggcctcggggaatggaagcggagaacgcgggcagctac
tcccttcagcaagctcaagctttttatacgtttccatttcaacaactgatggctgaagct
cctaatatggcagttgtgaatgaacagcaaatgccagaagaagttccagccccagctcct
gctcaggaaccagtgcaagaggctccaaaaggaagaaaaagaaaacccagaacaacagaa
ccaaaacaaccagtggaacccaaaaaacctgttgagtcaaaaaaatctagcaagtctgca
aaatcaaaagaaaagcaagaaaaattacagacacatttaaagtcaaaagaaaataaagaa
gtttttggtgtaaaggttaagaacttggaatttgggcttcagccccataagattccaggc
acagaaactctctgctatgttatgccgtcatccagtgcaagaagtgctcagtttcctcgg
gcccaagacaaagttcattactacataaaactgaaagacttaagagatcagttgagaggc
attgaacgaaatacggacgttcaagaggtgcaatatacatttgacctacagcttgcccaa
gaagatgcaaagaagatggctgttaaggaagaaaaatatgatctgggttatgaggcagca
tatggtggtgcttacggagaaaatccatgcgacagtgaaccttgcagcttctcttcaaat
gggctaattgagagcctggagttaagaggagaatcaactttcagtggcattcctaatgag
cagtggatgacccagtcatttacagaccaaattccttcctttaataatcactgtggaaca
caagaacaggaagaagaaagccatgcttaa

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_5|318_aa
MNNWINLKIRSLNSVCTDVENCSMHIVRQSSQIKDHSNYTQQQHGKEASAAEVIWIQEER
EDAFNQKVAYGVARSSPDLVGEEPLQLILEKPVGDRRWSCAKGSLTGEQKLISKEERRRS
TEIFGGSYLLDKIGCILFTPTMNGGSSVNRTERAQEYNEYCATGNVNATNKGGREGKQRE
EIVEGGASTALHLLLPSGGLVEAAVWLQVGCLLKAVHVIMMPSLVWEQTVSRVGANLCPL
FLPRCLQRALPFGLALAAVFHKSVSTIFAERRSVTMGLCSKSFVAPHTLSTSGPIVLVGF
PQEMLLYYFYGQLLLIPP

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_5|957_bp
atgaataattggataaacctgaaaatacgatcactgaactcggtatgcactgatgtggaa
aactgttcaatgcacattgttaggcagagctcccaaattaaggatcatagcaattacaca
caacaacagcatggaaaagaagccagtgctgcagaggtgatctggatccaggaagaaagg
gaagatgccttcaatcaaaaagttgcttatggagtggccagaagcagtccagacctggtt
ggggaagaaccactgcagttaatcctggaaaagcctgtcggggatagaaggtggagctgt
gctaaaggctcactaactggggaacagaagttgatcagcaaggaggaaaggagaagatcc
acagaaatatttggaggcagttatttattggacaaaatcggatgtattctgtttacaccc
acaatgaatggaggctcctcagtaaatagaaccgagcgggctcaggagtataatgaatac
tgtgcaacgggcaatgtgaatgcaaccaataagggagggagagaaggaaaacaaagagag
gaaatagtcgagggaggagcaagcacagcccttcatctgcttctgccgagtggagggctt
gtggaagctgcggtgtggcttcaggtaggttgtctgttgaaagctgtccatgtgataatg
atgcctagtctggtttgggaacaaacagtaagcagagttggagccaacctctgcccactt
ttcttaccaagatgcctgcaacgagccctaccctttggcttggctctggcagctgttttt
cataagtcagtcagcacaatctttgcagaaaggagatcggtcactatgggtctctgctca
aaatccttcgttgcccctcacactctttcgacctcaggaccaattgtgctggttggtttc
ccccaggaaatgcttctctactatttctatggccagctccttctcattccaccttga

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_6|130_aa
MEAAPNTPHPAHKHSSSPNQPGRRVVKETAEAVPPQKNAQSNGGEINFSNKLKIHIEEAL
ALTQKLSAENLKKSRSSKTESTQEKFSDFNHSGTRKVQQNINVKSPVIQSWIPETAAARF
NVGHAKFPLC

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_6|393_bp
atggaagcagctcctaacacccctcaccctgctcacaaacactcgtcgagtccaaaccag
cctggcaggagagttgtaaaggaaacagcagaagcagtccctccccagaaaaatgcacag
tctaatggaggtgaaattaacttcagcaataaacttaagattcatattgaagaggcactt
gcactgactcagaaactttctgcagagaatctgaagaagagcaggagcagcaagacagaa
agcactcaagagaaattctcagattttaaccactcaggtaccaggaaggttcagcagaac
atcaatgtaaaatcaccagtcattcagtcttggatccctgagacagctgcagccagattt
aatgtgggacatgccaagtttccactgtgctga

>gi568815586f:25703298_25904526|GENSCAN_predicted_peptide_7|182_aa
MGTGSLQAVAGPAGNPVTCLALAEPGASTGLRGKELCPYWSMSGHGQAWKRHHKFPLWSA
GLAAQSPLWPEGACLRPAVTHSAQAACAKGHLQASNEPPSAPPWLPLTPCSSAPKVRMGL
ASQCCPECVHTRPGFCSAQARPQTCSEALGAGRGQAVGADTRNPAEALGAFPGPEGADCR
DV

>gi568815586f:25703298_25904526|GENSCAN_predicted_CDS_7|549_bp
atgggcactggctctctgcaagctgtggctggaccagctggtaatcccgtcacctgtcta
gctctggcggagcctggggcttctacgggcctcagggggaaggaactgtgtccctattgg
tccatgagcggccatgggcaggcctggaaaaggcaccacaagttcccactctggtctgcg
ggactggcagcccagtcgcctctctggcctgaaggagcctgtctgcgtcctgccgtcacc
catagtgcccaggctgcctgtgccaaggggcacctgcaggccagcaatgagccgccctca
gcacctccttggcttcccctaaccccgtgctcgtcggcacccaaagtccggatggggctc
gcgtctcagtgctgccctgagtgtgtgcacacccggccaggtttttgcagtgcccaggct
cgtccccaaacctgctctgaggctttgggagcaggaagaggccaggcagtgggagcagac
acccgcaaccctgcagaggcattgggggccttcccaggccccgagggtgcagactgtaga
gatgtctga