GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:30:42

Sequence gi568815586r:94871443_95103680 : 232238 bp : 41.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    274    269    6                               1.05
 1.01 Sngl -   1747   1436  312  1  0   73   47   260 0.639  14.09
 1.00 Prom -  10145  10106   40                              -6.55

 2.00 Prom +  12744  12783   40                              -7.35
 2.01 Sngl +  12875  13363  489  1  0   22   38   246 0.934   8.81
 2.02 PlyA +  13548  13553    6                               1.05

 3.00 Prom +  23280  23319   40                              -4.35
 3.01 Init +  30687  30845  159  2  0   60   82   138 0.049  10.31
 3.02 Term +  42869  42931   63  1  0  112   39    42 0.021  -1.39
 3.03 PlyA +  43256  43261    6                               1.05

 4.03 PlyA -  43735  43730    6                               1.05
 4.02 Term -  51229  50908  322  0  1   80   38   207 0.476   8.21
 4.01 Init -  52254  52211   44  0  2   85   55    83 0.803   4.64
 4.00 Prom -  53014  52975   40                              -5.05

 5.07 PlyA -  54981  54976    6                               1.05
 5.06 Term -  55482  55318  165  0  0   31   44   387 0.867  25.53
 5.05 Intr -  56778  56668  111  0  0   52   37   102 0.093   1.16
 5.04 Intr -  77420  77127  294  2  0    2   -1   291 0.145   7.88
 5.03 Intr -  77537  77451   87  2  0   50   80    95 0.632   4.15
 5.02 Intr -  79657  79537  121  0  1   55   83    82 0.683   3.98
 5.01 Init -  81635  81577   59  2  2   97   72    40 0.772   4.13
 5.00 Prom -  91408  91369   40                              -5.15

 6.07 PlyA -  93095  93090    6                               1.05
 6.06 Term - 100178  99998  181  1  1   96   43   139 0.217   6.30
 6.05 Intr - 109001 108974   28  0  1   63   94    27 0.029  -2.94
 6.04 Intr - 117828 117621  208  0  1   50   56   151 0.036   5.83
 6.03 Intr - 122815 122742   74  2  2   76    6    56 0.008  -5.59
 6.02 Intr - 131379 131297   83  2  2   81   97    63 0.958   4.86
 6.01 Init - 132238 132153   86  1  2  104   96   103 0.998  13.04
 6.00 Prom - 133619 133580   40                              -5.65

 7.02 PlyA - 133808 133803    6                               1.05
 7.01 Sngl - 141982 141647  336  1  0   49   37   202 0.856   6.98
 7.00 Prom - 149696 149657   40                              -7.75

 8.13 PlyA - 149761 149756    6                               1.05
 8.12 Term - 150961 150787  175  0  1  133   48   106 0.994   7.35
 8.11 Intr - 153813 153708  106  1  1   66   70    87 0.856   3.05
 8.10 Intr - 160046 159907  140  1  2   68   93    49 0.463   2.59
 8.09 Intr - 169155 169034  122  0  2   59   96    51 0.379   1.37
 8.08 Intr - 177791 177626  166  1  1   61   30   130 0.848   3.54
 8.07 Intr - 180501 180320  182  0  2   45  116   160 0.936  12.24
 8.06 Intr - 186201 186111   91  2  1   75   93    95 0.990   7.78
 8.05 Intr - 186436 186289  148  2  1   23   98   173 0.925  10.17
 8.04 Intr - 187047 186868  180  1  0   95   40    81 0.825   2.92
 8.03 Intr - 188542 188464   79  1  1  104   92    40 0.997   4.21
 8.02 Intr - 191296 191066  231  1  0   32   99   127 0.947   5.25
 8.01 Init - 195942 195889   54  0  0   63   87    60 0.664   4.73
 8.00 Prom - 196764 196725   40                              -6.65

 9.00 Prom + 198405 198444   40                              -5.65
 9.01 Init + 198845 198852    8  1  2  103   80     0 0.740   1.25
 9.02 Intr + 201184 201395  212  1  2   56   41   167 0.436   6.43
 9.03 Intr + 201825 202108  284  1  2   61   24   254 0.399  12.51
 9.04 Intr + 202159 202318  160  0  1   49   91   206 0.823  15.64
 9.05 Intr + 213388 213527  140  2  2  103  121   -42 0.003  -0.14
 9.06 Intr + 221208 221290   83  2  2   29   94    44 0.011  -3.38
 9.07 Intr + 225085 225256  172  1  1   60  110   101 0.163   8.52
 9.08 Intr + 227776 227843   68  0  2   62   77    40 0.051  -2.92
 9.09 Term + 228986 229475  490  2  1   34   48   387 0.175  22.44
 9.10 PlyA + 230052 230057    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  90042  90178  137  1  2   76   48    71 0.848  -0.90
S.002 Term - 110464 110351  114  1  0   42   42   140 0.856   2.39
S.003 Term + 225403 225591  189  0  0  102   35    84 0.841   0.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_1|103_aa
MPALRHLEGASLLQARPADGAQLLAWGALGGCGCCFTGRCQGARAHPHPPAKAACGKTKN
KQAQLQWLFHLQGQLGGLVLLVVSPGESAGPSAARSYLSGEVN

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_1|312_bp
atgcctgcactccggcatttggaaggcgcgagcctcctccaggcacggcccgccgacggc
gcgcagctcctggcctggggcgccctcgggggctgcggctgctgctttaccggcaggtgc
cagggagcccgcgctcacccccaccctccagccaaggctgcctgtggaaaaacgaaaaat
aaacaggctcagctgcagtggctcttccacctccagggacagcttgggggactggtgctg
cttgttgttagccccggagagagcgcaggccctagtgcagctcgttcttacttgtctggg
gaagttaattga

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_2|162_aa
MRQKINKDIQDLNSVLDQVDLIDIYRTLHRKSIEYTLFSAPHHTYSQIDHIIGSKTLRSK
CKRMEIINILSDHSAIKLELRIKKLTQNCTTTWKLNNLLLNDYWVNNEIKAEINKFFETN
ENKDTMYQNLWDTAKAVFRGKFIALNAHSPTGESRKDLKLTP

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_2|489_bp
atgagacagaaaattaacaaggatattcaggatttgaactcagttctggaccaagtggac
ctaatagacatctacagaactctccatcgcaaatcaatagaatatacattattctcagca
ccacatcacacttattctcaaattgaccacataattggaagtaaaacactccgtagcaaa
tgcaaaagaatggaaatcattaacattctctcagaccacagtgcaatcaaattagaactc
aggattaagaaactcactcaaaactgcacaactacatggaaactgaacaacctgctcctg
aatgactactgggtaaataacgaaattaaggcagaaataaataagttctttgaaaccaat
gagaacaaagacacaatgtaccagaatctctgggacacagctaaagcagtgtttcgtggg
aaatttatagcactaaatgcccacagccccacaggagaaagcaggaaagatctaaaattg
acaccctaa

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_3|73_aa
MSPALELDHLLQCLWPGTLRMIKAADATALTAPSGEQSIAKEAQAVRWMNRSQDFTAIFL
LFVVYDPSSPHPK

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_3|222_bp
atgtctccagccctagagctggaccatttacttcagtgtctctggccaggcacactgagg
atgataaaggctgctgatgccacggcactgactgcaccctcaggagagcaaagcattgcc
aaagaagcccaagctgttcggtggatgaacagatcccaggacttcactgccattttcttg
ctttttgtcgtttatgatccaagctcccctcatcccaaatag

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_4|121_aa
MSRVLVAHGPHPVASLSLSNPSSASEYPAERAQLLSAEVLLRGPGRQDSSLVLCYPHMVL
GSLLHPLPQETPGVPADPNIEALLVLPSPKHVASFVTEENILNFLGGVGLQFVVHSKFLA
L

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_4|366_bp
atgagcagagtcctcgtggcccatgggccacatcccgttgcaagcttgtctctttcaaat
ccttcctcagcctctgagtatccagctgaacgtgctcagctgctttctgctgaggtcctt
ctcagaggacctggtagacaggactcaagccttgtcttgtgttacccccatatggtcttg
ggaagtctccttcatcctttgcctcaggaaactccaggagtgcccgctgatcccaatata
gaagccctgcttgttcttccatctccaaagcacgtagccagctttgtaacggaggaaaac
attctgaattttcttggtggagttggacttcagttcgtggtgcactctaagtttcttgct
ctttag

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_5|278_aa
MHSNTLQEGEHTDGQMQELGHSPQAPLTSPLHTQTTHIINDDAREDPGFVETKVYTICGE
EGKCDAKLTKCEAMRKILPEPSKDLESAQFHSRSAPGDAAVSRGPLCEAAVIRGPLCEAA
IVWGSGKLKEHQSELDLKSKLLSLFRSKVLPLACVLRATPLFSLALLCMAGSQQPPEGER
GDKGEARELKIIFNASQQKTEVLSPTSHKEMNSANNRVNETAVLKKKKKEEEEEEEEEEE
EEEEEEEEEEEEEGRRRRRSSPSCYSITPELSCKLGHR

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_5|837_bp
atgcactcaaacaccttacaggagggggagcacacagatgggcagatgcaggagctggga
catagccctcaagcacctctcacttcacctctccacacccaaacaactcacataataaat
gatgatgccagggaagatccaggttttgtggaaactaaggtttatacaatttgtggggag
gaggggaagtgtgatgccaagttgactaaatgtgaggccatgaggaaaatattaccagag
ccctccaaggaccttgagtctgcccaatttcacagtaggtctgccccgggtgatgcagcc
gtcagtcgggggcccctgtgtgaagcggccgtcatccggggacccctgtgtgaagcagcc
attgtctggggatctggcaaattgaaggagcaccagtctgagttggatctgaaatctaaa
ttgttgtccttattcagaagcaaagtgctgcccctggcctgtgttctcagagccactcct
ctcttttcccttgctctgctctgtatggcaggaagccaacagccacctgaaggagaacgt
ggggacaagggagaagccagggaactgaagataatcttcaatgccagccagcaaaaaacg
gaggtcctcagtccaacatcccacaaggaaatgaattctgccaacaaccgtgtgaatgag
actgcagtcttgaagaagaagaagaaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaaggaagaagaagaagaagaagc
agcccatcttgttattctataacccctgaactaagttgtaaacttggccatcgttga

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_6|219_aa
MELVQVLKRGLQQITGHGGLRGYLRVFFRTNDAKVGTLVGEDKYGNKYYEDNKQFFGRHR
WVVYTTEMNGKNTFWDVDGSMGKAEKHPLYNCGNEKCKEDNMKLGLMGIKSNGRVRWLFY
TAVRESFFEKVTFEERRRSGEKAFQAEGTTEAFVEKQGGRHRWLHSMTDDPPTTKPLTAR
KFIWTNHKFNVTGTPEQYVPYSTTRKKIQEWIPPSTPYK

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_6|660_bp
atggagttagtgcaggtcctgaaacgcgggctgcagcagatcaccggccacggcggtctc
cgaggctatctacgggtttttttcaggacaaatgatgcgaaggttggtacattagtgggg
gaagacaaatatggaaacaaatactatgaagacaacaagcaattttttggccgtcaccga
tgggttgtatatactactgaaatgaatggcaaaaacacattctgggatgtggatggaagc
atggggaaggcagaaaaacatcctttatataattgtggtaatgaaaaatgcaaggaagat
aatatgaagctgggcctcatgggaatcaagagcaatggaagggtcaggtggctgttttat
acagcagttagagaaagcttctttgagaaagtgacatttgaggaaagacgtagaagcggg
gagaaagcgttccaggcagagggaaccacagaagcctttgtagagaaacagggtggcagg
catcgttggcttcacagtatgactgatgatcctccaacaacaaaaccacttactgctcgt
aaattcatttggacgaaccataaattcaacgtgactggcaccccagaacaatatgtacct
tattctaccactagaaagaagattcaggagtggatcccaccttcaacaccttacaagtaa

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_7|111_aa
MLKKSIRTDGLDLDKEQISELVHKCKEMVQNVKHKDENGKYAEKTKYSGNVKKIIGDQSR
RVNVHLIPRFRKEVTENVGEKLFKTISTAKNVTSPNSKMMLNSNKHQLQKP

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_7|336_bp
atgttgaaaaaatctatcaggactgatggactggacctagacaaggaacaaattagtgaa
ctggtacataaatgcaaagaaatggttcagaatgtaaagcacaaagatgaaaatggaaaa
tatgcagaaaaaacaaaatattcaggtaacgttaaaaagataataggggatcaatccaga
agggtcaatgttcacctaatacccagatttcggaaagaagtaacagaaaatgtaggggaa
aaattatttaaaacaatttctactgctaaaaatgtcacatctccaaattcaaagatgatg
ctgaattccaacaaacatcaactacaaaagccctag

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_8|557_aa
MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA
RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA
SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ
DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM
FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES
LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN
YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE
NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDHPSLENMEQIEKFQE
KAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHI
LKMEPADYNSQIIGHSI

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_8|1674_bp
atggcaaccatagaagaaattgcacatcaaattattgaacaacagatgggagagattgtt
acagagcagcaaactgggcagaaaatccagattgtgacagcacttgatcataatacccaa
ggcaagcagttcattctgacaaatcacgacggctctactccaagcaaagtcattctggcc
aggcaagattccactccgggaaaagttttccttacaactccagatgcagcaggtgtcaac
cagttattttttaccactcctgatctgtctgcacaacacctgcagctcctaacagataat
tctccagaccaaggaccaaataaggtttttgatctttgcgtagtatgtggagacaaagca
tcaggacgtcattatggagcagtaacttgtgaaggctgcaaaggattttttaaaagaagc
atccgaaaaaatttagtatattcatgtcgaggatcaaaggattgtattattaataagcac
caccgaaaccgctgtcaatactgcaggttacagagatgtattgcgtttggaatgaagcaa
gactctgtccaatgtgaaagaaaacccattgaagtatcacgagaaaaatcttccaactgt
gccgcttcaacagaaaaaatctatatccgaaaggaccttcgtagcccattaactgcaact
ccaacttttgtaacagatagtgaaagtacaaggtcaacaggactgttagattcaggaatg
ttcatgaatattcatccatctggagtaaaaactgagtcagctgtgctgatgacatcagat
aaggctgaatcatgtcagggagatttaagtacattggccaatgtggttacatcattagcg
aatcttggaaaaactaaagatctttctcaaaatagtaatgaaatgtctatgattgaaagc
ttaagcaatgatgatacctctttgtgtgaatttcaagaaatgcagaccaacggtgatgtt
tcaagggcatttgacactcttgcaaaagcattgaatcctggagagagcacagcctgccag
agctcagtagcgggcatggaaggaagtgtacacctaatcactggagattcaagcataaat
tacaccgaaaaagaggggccacttctcagcgattcacatgtagctttcaggctcaccatg
ccttctcctatgcctgagtacctgaatgtgcactacattggggagtctgcctccagactg
ctgttcttatcaatgcactgggcactttcgattccttctttccaggctctagggcaagaa
aacagcatatcactggtgaaagcttactggaatgaactttttactcttggtcttgcccag
tgctggcaagtgatgaatgtagcaactatattagcaacatttgtcaattgtcttcacaat
agtcttcaacaagatcatccaagcctagaaaacatggaacagatagagaaatttcaggaa
aaggcttatgtggaattccaagattatataaccaaaacatatccagatgacacctacagg
ttatccagactactactcagattgccagctttaagactgatgaatgctaccatcactgaa
gaattgtttttcaaaggtctcattggcaatatacgaattgacagtgttatcccacatatt
ttgaaaatggagcctgcagattataactctcaaataattggtcacagcatttga

>gi568815586r:94871443_95103680|GENSCAN_predicted_peptide_9|538_aa
MPRLTYLLKIMGQPGNIRTAQKWYLPELEELFLNKRAIYRKLGHAPCSENPGAVPFLLKR
SRPTGSDDPGQICRRRPGDALGPRPLAVGVKGTPWPPPPTRSLVSPPSVSYRRFCALLTP
ASGADATVPRLPLVDWGALREERLKKADGMWDRDSRRRELSVFGYFWGRLRISNGEKRRE
EVVTFPGWGGGIGGPSSGSVSPLPPFGLEAECPARATRSQPGTLYARHCGTQFLACSHLL
NFTTSSLNQGRHVIILLSFYGCRKQLRKPGDSKDHNGDGCYHRQPFHRPGSGVVSSITAK
TRCHLTVTTSANSAKCLANVTMSHPQSFPMEYTLDLTPLAPNYNIITHLHHLQHNAWPKV
EAPYSLLNEGMNCRWRLLTKAQTGLPRPAGCLLPWLHCLAHHVTTAAIHKAPNSEANRTV
GCICSHDFLGDSCGILFSHPWDSKPVCTMELGRAAKLAPEFTKSNVKLTALATDSAEDHL
AWSKDINAYNSDERTEKCPFPNIDGKDQDLAVLLGMLDPPELEEKGMGVRAYGVYFCS

>gi568815586r:94871443_95103680|GENSCAN_predicted_CDS_9|1617_bp
atgcccaggctgacctacttactgaagattatgggacaacctggcaacattcgtactgca
caaaaatggtatctgcccgagttggaagaattatttcttaacaaaagagctatctatcgg
aagcttggacatgccccctgcagtgagaaccctggggccgttccatttcttctgaaaaga
tccaggcccacaggcagcgacgaccctggccagatttgccgacgccggccgggggatgcg
ctgggaccgcgtccgttggcggttggggtgaagggcaccccctggcccccgcccccgacg
cggtcgctggtgtccccacccagcgtttcttaccggcgcttttgcgccctgctgactccg
gcgtcgggcgccgacgcgacagtcccgcggctgccactcgtggattggggggcgctccgg
gaagagaggttgaagaaagccgacgggatgtgggatcgagattcacggcggagagagctt
tctgtgtttgggtatttctgggggcgcctgcgcattagcaacggggagaagcggcgagag
gaggtcgtgacgttcccagggtggggtggagggatcggagggccgagcagcggctctgtg
agtccactgcccccttttggcttggaggcagagtgccccgccagagctacgcgttcccag
ccaggtaccctatatgccaggcactgtggcacacaatttctggcatgttcacatctactg
aatttcacaacatcctcactaaaccaaggaaggcacgtgattatattactttcattttat
ggatgcagaaaacagctcagaaagcctggagacagtaaagaccacaatggagatgggtgt
tatcatcgccaacctttccacaggcccggcagtggtgtcgtctccagcattactgccaaa
acaagatgccatttaacagttactacgtcagccaactctgctaaatgcttagcaaatgtc
accatgtctcaccctcagagcttccccatggaatacacattggatcttacaccccttgcc
cccaactacaacatcatcacccaccttcaccatttacagcacaatgcctggcccaaggta
gaggctccatattccttactgaacgaagggatgaactgcaggtggagactactaacaaaa
gcacaaacaggactgcccagaccagctggctgcttgctgccgtggctacactgtctcgcc
caccatgtcactactgctgccatccacaaggctcccaactcggaggctaatcgcactgtt
ggctgtatctgttcccacgactttctaggagactcctgtggcattcttttttcccaccct
tgggactctaaaccagtgtgcactatggagcttggcagagctgcaaagctggcaccagaa
ttcaccaagagcaatgtgaagttgactgcccttgcaacagacagtgctgaggaccatctt
gcctggagcaaggatatcaatgcttacaatagtgatgagcgaacagaaaaatgccctttt
cccaacattgatggtaaggatcaggaccttgccgtcttgttgggcatgctggatcctcct
gagttggaagaaaagggaatgggtgtcagagcttatggtgtttatttttgctcctga