GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:56:18

Sequence gi568815586f:12808250_13012536 : 204287 bp : 44.63% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    609    655   47  0  2  115   55    59 0.194   3.35
 1.02 Intr +   5093   5205  113  0  2   39   85   106 0.223   5.50
 1.03 Intr +   5882   5975   94  1  1   29  100    54 0.961   0.24
 1.04 Intr +  12959  13147  189  0  0  101  103    81 0.981  10.46
 1.05 Intr +  13716  13834  119  1  2   71   83   128 0.999  10.78
 1.06 Intr +  14412  14483   72  2  0   89   62    89 0.984   6.00
 1.07 Intr +  14954  15070  117  1  0   87   93    17 0.869   2.76
 1.08 Intr +  15621  15767  147  2  0   59  110     5 0.510   0.23
 1.09 Intr +  16291  16428  138  0  0   61  113    98 0.992  10.26
 1.10 Intr +  17751  17821   71  2  2  105   98    33 0.995   3.98
 1.11 Intr +  18997  19126  130  1  1   69   68   150 0.969  11.80
 1.12 Term +  21174  21305  132  2  0  126   37   184 0.991  15.19
 1.13 PlyA +  21705  21710    6                               1.05

 2.00 Prom +  25939  25978   40                              -2.96
 2.01 Init +  27475  27659  185  0  2   99   75    23 0.246   0.70
 2.02 Term +  31608  31701   94  0  1   77   54    89 0.805   1.70
 2.03 PlyA +  32108  32113    6                               1.05

 3.00 Prom +  41932  41971   40                              -2.66
 3.01 Sngl +  42616  43455  840  0  0   86   49   518 0.697  43.45
 3.02 PlyA +  44107  44112    6                               1.05

 4.00 Prom +  49859  49898   40                              -6.16
 4.01 Sngl +  67250  67861  612  1  0   96   52   956 0.890  87.00
 4.02 PlyA +  67866  67871    6                               1.05

 5.08 PlyA -  71496  71491    6                               1.05
 5.07 Term -  77590  77534   57  1  0   87   44    67 0.068  -0.11
 5.06 Intr -  82467  82380   88  2  1  118   18    41 0.171   0.07
 5.05 Intr -  83467  83249  219  0  0   84   72   110 0.639   6.42
 5.04 Intr -  84639  84557   83  0  2  104   64    68 0.906   4.44
 5.03 Intr -  92222  92187   36  2  0  121  108   -21 0.688   1.66
 5.02 Intr -  93129  93011  119  1  2   99  107   -41 0.350  -0.92
 5.01 Init -  95961  95808  154  0  1   58   63    86 0.474   3.24
 5.00 Prom -  98409  98370   40                              -4.16

 6.00 Prom +  98437  98476   40                             -11.14
 6.01 Init + 100001 100922  922  1  1   75   87   990 0.962  91.74
 6.02 Intr + 103835 103893   59  0  2  133  111    66 0.999  12.00
 6.03 Intr + 105274 105299   26  0  2   58   84    60 0.252  -0.58
 6.04 Intr + 119455 119554  100  1  1   97  103    19 0.131   4.41
 6.05 Term + 127118 127216   99  1  0   45   37   122 0.475   0.93
 6.06 PlyA + 127274 127279    6                               1.05

 7.05 PlyA - 128153 128148    6                               1.05
 7.04 Term - 132600 132526   75  0  0  105   35    27 0.173  -3.06
 7.03 Intr - 134079 134012   68  1  2  109   99    41 0.621   5.92
 7.02 Intr - 135687 135637   51  1  0  141   19    33 0.254   0.58
 7.01 Init - 142135 141241  895  1  1   86   73   786 0.487  71.40
 7.00 Prom - 143205 143166   40                              -4.26

 8.05 PlyA - 148941 148936    6                               1.05
 8.04 Term - 167230 167059  172  0  1   88   48   297 0.991  23.00
 8.03 Intr - 179083 178903  181  2  1  137   75   126 0.882  15.13
 8.02 Intr - 181166 181028  139  2  1  131   96   236 0.984  28.74
 8.01 Init - 186817 186758   60  1  0   84   61    18 0.258   0.15
 8.00 Prom - 190868 190829   40                              -3.56

 9.00 Prom + 192847 192886   40                              -7.96
 9.01 Init + 193253 193318   66  1  0   82   59    64 0.211   4.06
 9.02 Intr + 193581 193786  206  2  2   25   82   436 0.819  34.70
 9.03 Intr + 194030 194138  109  2  1   62   29    98 0.674   1.59
 9.04 Term + 194288 194581  294  1  0   75   42   165 0.798   5.91
 9.05 PlyA + 194606 194611    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  55039  54944   96  0  0   95   74    76 0.856   6.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_1|456_aa
XKVCVAAFEEESCFRLYPLPETSHKMAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVL
CEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFA
LVLTPTRELAFQISEQFEALGSSIGVQSATPGRLIDHLENTKGFNLRALKYLVMDEADRI
LNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQ
QYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQ
SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGR
SGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGE
KKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_1|1371_bp
nnaaaagtctgtgtggctgcttttgaagaagaaagctgctttcgattatacccacttccg
gagacctcacacaagatggcggcacccgaggaacacgattctccgaccgaagcgtcccag
ccgattgtggaagaggaggaaactaaaacatttaaagacctgggtgtgacagatgtgttg
tgtgaagcttgtgaccagttgggatggacaaaacccaccaagatccagattgaagctatt
cctttggccttacaaggtcgtgatatcattgggcttgcagaaactggctctggaaagaca
ggcgcctttgctttgcccattctaaacgcactgctggagaccccgcagcgtttgtttgcc
ctagttcttaccccgactcgggagctggcctttcagatctcagagcagtttgaagccctg
gggtcctctattggagtgcagagtgcaactcctggtcgactgattgaccacttggaaaat
acgaaaggtttcaacttgagagctctcaaatacttggtcatggatgaagccgaccgaata
ctgaatatggattttgagacagaggttgacaagatcctcaaagtgattcctcgagatcgg
aaaacattcctcttctctgccaccatgaccaagaaggttcaaaaacttcagcgagcagct
ctgaagaatcctgtgaaatgtgccgtttcctctaaataccagacagttgaaaaattacag
caatattatatttttattccctctaaattcaaggatacctacctggtttatattctaaat
gaattggctggaaactcctttatgatattctgcagcacctgtaataatacccagagaaca
gctttgctactgcgaaatcttggcttcactgccatccccctccatggacaaatgagtcag
agtaagcgcctaggatcccttaataagtttaaggccaaggcccgttccattcttctagca
actgacgttgccagccgaggtttggacatacctcatgtagatgtggttgtcaactttgac
attcctacccattccaaggattacatccatcgagtaggtcgaacagctagagctgggcgc
tccggaaaggctattacttttgtcacacagtatgatgtggaactcttccagcgcatagaa
cacttaattgggaagaaactaccaggttttccaacacaggatgatgaggttatgatgctg
acagaacgcgtcgctgaagcccaaaggtttgcccgaatggagttaagggagcatggagaa
aagaagaaacgctcgcgagaggatgctggagataatgatgacacagagggtgctattggt
gtcaggaacaaggtggctggaggaaaaatgaagaagcggaaaggccgttaa

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_2|92_aa
MQSLGGGPQGLLRVLELLFARSHPSPYTIQTQRMSPVTVTLQSSASAVKEAGRSRRNWER
NSIYVWVNSELCVITKGSLEGDERALQGQVSD

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_2|279_bp
atgcagtctctaggaggtgggccccaaggtctgctcagagtcttggagcttttgtttgct
cgtagccatccatccccttataccatccaaacacaaaggatgtctcctgtcactgtcacc
cttcaatcatctgccagtgccgtcaaagaggccggaaggagcaggaggaattgggaaagg
aacagcatctatgtctgggtgaactcagaattatgtgtgatcaccaagggcagccttgaa
ggggacgagagggccctacaaggacaagtctctgactga

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_3|279_aa
MVESKGGARHVLHGGKQERSRGELPLESHQVLEAFSCFKMKLNISFPVTGCQKLIEVDDE
CKLRTFYEKLMATEVAADTLGEEWKGYVVRISGGNNKQGFPMKQGVLTHGRVHLLLSKGH
SCYRPRRTGERKRKSVRGCIVDANLSILNLIIVKKKKKVKKDIPGLTDTMVPCRLGPKKA
SRICKLSNLSEEDDVRQYVVRKPSNKGGKKPRTKAPKIQHLVTPHFLQHKGQHIALKKPC
TKKNKEEAAEYAKLLGKGMKEAKEKRQEQIAKRHRLSSL

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_3|840_bp
atggtggaaagcaaaggaggagcaaggcatgtcttacatggtggcaagcaagagagaagt
agaggggaactccctttagaaagccatcaggtcttggaggcattcagctgcttcaagatg
aagctgaacatctccttcccggtcactggctgccagaaactcattgaagtggatgatgaa
tgcaaacttcgtactttttatgagaagcttatggccacagaagttgctgctgacactctg
ggtgaagaatggaaaggttatgtggtccgaatcagtggtgggaacaacaaacaaggtttt
cccatgaagcagggtgtcttgacccatggccgtgtccacctgctactgagtaaggggcat
tcctgttacagaccaaggagaactggagaaagaaagagaaaatcagttcgtggttgcata
gtggatgccaatctgagcattctcaacttgattattgttaaaaaaaaaaaaaaagtaaag
aaggatattcctggactgactgatactatggtgccttgtcgcctggggcccaaaaaagct
agcagaatctgcaaactttccaatctctctgaagaagatgatgtccgccagtatgttgta
agaaagccctcaaacaaaggaggtaagaaacctaggaccaaagcacccaagattcagcat
cttgttactccacatttcctgcagcacaaagggcagcatattgctctgaagaagccgtgt
actaagaaaaataaggaagaggctgcagaatatgctaaacttttaggcaagggaatgaag
gaggctaaagagaagcgccaggaacaaattgcgaagagacacagactttcctctctgtga

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_4|203_aa
MAEVQVLVLDGRGHLLGHLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLKYLAFLRK
RMNSNPSRGPYPLQAPSRIFWQTMRGMPPHKTKPGQAALDCLKVFDGIPPPYDKKKRMVV
PAALKVVRLKPARKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQFMRLWKQ
AEKNVEKKIDKYTEVLKTHGLLV

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_4|612_bp
atggcggaggtacaggtcctggtgcttgatggtcgaggccatctcctgggccacctggcg
gccatcgtggctaaacaggtactgctgggccggaaggtggtggttgtatgctgtgaaggc
atcaacatttctggcaatttctacagaaacaagttgaagtacctggctttcctccgcaag
cggatgaacagcaacccttcccgaggcccctaccccctccaggcccccagccgcatcttc
tggcagaccatgcgaggtatgccgccccacaagaccaagccaggccaggccgctctggac
tgcctcaaggtgtttgacggcatcccaccgccctacgacaagaaaaagcggatggtggtt
cctgctgccctcaaggttgtgcgtctgaagcctgcaagaaagtttgcctatctggggcgc
ctggctcacgaggttggctggaagtaccaggcagtgacagccaccctggaggagaagagg
aaagagaaagccaagatccactaccggaagaagaaacagttcatgaggctatggaaacag
gccgagaagaacgtggagaagaaaattgacaaatacacagaagtcctcaagacccacgga
ctcctggtctga

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_5|251_aa
MRALPGYTVNVEEEDPISFKGGERKELRPCALHCVSPHPGRLITRVLSSRKGCQKLHFGS
EIRSAWPCLNPAPILVAAGGSQESMNPEVLLGEGVSAARLCEQPIVSEVAEVFPFRNEPT
AVADSAEPFNRRFKSGGPSALGSWRLTYPSAKALAVNLVLLPARKRAAGELLSAGGDLGQ
LSRPRTLSSCYKGGPRRREGTSEGIKPIGPKLVFVYVWNDPGVAARLCRGSSQQQYTFEM
YTFEIFAYASM

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_5|756_bp
atgagggctctcccaggctacaccgtgaatgtggaagaggaagaccctatttccttcaag
ggcggcgagcggaaggaactcaggccctgtgcacttcactgtgtctctccacaccccggc
agattaatcaccagggtgttgtctagcaggaaaggctgccaaaaattgcactttgggtct
gagattaggagcgcctggccatgtctgaaccccgctcctatcttagtggccgcaggtggc
tcccaggaaagcatgaatcctgaggttttactgggagaaggggtttcagctgccaggctg
tgtgaacaacccattgtgtctgaagtagctgaagtgttccccttcaggaatgaacccaca
gcagtggctgattcggccgaacccttcaacagacgatttaaatccggaggccccagcgct
ctgggctcctggcgcctcacttaccctagtgccaaggcgttggccgtgaacttggtgctg
cttcccgcgcgcaagagggcagcaggcgagctcctcagtgctgggggagaccttggacag
ctatcccgccctcgcactctgagcagttgttataaaggcggccctcgccggagggaggga
acgagcgaggggatcaagccaatcggaccgaaactcgtctttgtttacgtgtggaacgat
cctggagtggctgcccgcctgtgtcggggctcaagccagcaacaatacacctttgaaatg
tacacctttgaaatttttgcatatgccagcatgtga

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_6|401_aa
MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW
DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY
SQEEITQGFEETGDTLYAPYSTHFQLQIYRIYGCILCWQATAQVWTAYTKGRVRGEGTQD
SGSMPAYKTTIKGSFQEKVDLELIVEEENKEEEGTKLADIE

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_6|1206_bp
atggctacaacagtccctgatggttgccgcaatggcctgaaatccaagtactacagactt
tgtgataaggctgaagcttggggcatcgtcctagaaacggtggccacagccggggttgtg
acctcggtggccttcatgctcactctcccgatcctcgtctgcaaggtgcaggactccaac
aggcgaaaaatgctgcctactcagtttctcttcctcctgggtgtgttgggcatctttggc
ctcaccttcgccttcatcatcggactggacgggagcacagggcccacacgcttcttcctc
tttgggatcctcttttccatctgcttctcctgcctgctggctcatgctgtcagtctgacc
aagctcgtccgggggaggaagcccctttccctgttggtgattctgggtctggccgtgggc
ttcagcctagtccaggatgttatcgctattgaatatattgtcctgaccatgaataggacc
aacgtcaatgtcttttctgagctttccgctcctcgtcgcaatgaagactttgtcctcctg
ctcacctacgtcctcttcttgatggcgctgaccttcctcatgtcctccttcaccttctgt
ggttccttcacgggctggaagagacatggggcccacatctacctcacgatgctcctctcc
attgccatctgggtggcctggatcaccctgctcatgcttcctgactttgaccgcaggtgg
gatgacaccatcctcagctccgccttggctgccaatggctgggtgttcctgttggcttat
gttagtcccgagttttggctgctcacaaagcaacgaaaccccatggattatcctgttgag
gatgctttctgtaaacctcaactcgtgaagaagagctatggtgtggagaacagagcctac
tctcaagaggaaatcactcaaggttttgaagagacaggggacacgctctatgccccctat
tccacacattttcagctgcagatttaccgcatttacggctgcattctgtgctggcaggcc
actgcgcaagtgtggacagcctacaccaagggaagagtcaggggagaaggaacacaagac
tccggaagcatgccagcgtataaaaccaccatcaaaggaagtttccaggaaaaggtagat
ctcgaattaattgtggaagaagaaaacaaagaagaagaaggcacgaagttggccgatata
gaatag

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_7|362_aa
MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVL
PTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRG
CVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGMMFVNMTPCQLNVDFVVLLVYVLFL
MALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDDP
VVCIALVTNAWVFLLLYIVPELCILYRSCRQECPLQGNACPVTAYQHSFQVENQELSRDK
WKVLLNSDFLSHSGAARDSDGAEEDVALTSYGTPIQPQTVDPTQECFIPQAKLSPQQDAG
GV

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_7|1089_bp
atgtacaaggactgcatcgagtccactggagactattttcttctctgtgacgccgagggg
ccatggggcatcattctggagtccctggccatacttggcatcgtggtcacaattctgcta
ctcttagcatttctcttcctcatgcgaaagatccaagactgcagccagtggaatgtcctc
cccacccagctcctcttcctcctgagtgtcctggggctcttcggactcgcttttgccttc
atcatcgagctcaatcaacaaactgcccccgtacgctactttctctttggggttctcttt
gctctctgtttctcatgcctcttagctcatgcctccaatctagtgaagctggttcggggt
tgtgtctccttctcctggacgacaattctgtgcattgctattggttgcagtctgttgcaa
atcattattgccactgagtatgtgactctcatcatgaccagaggtatgatgtttgtgaat
atgacaccctgccagctcaatgtggactttgttgtactcctggtctatgtcctcttcctg
atggccctcacattcttcgtctccaaagccaccttctgtggcccgtgtgagaactggaag
cagcatggaaggctcatctttatcactgtgctcttctccatcatcatctgggtggtgtgg
atctccatgctcctgagaggcaacccgcagttccagcgacagccccagtgggacgacccg
gtcgtctgcattgctctggtcaccaacgcatgggttttcctgctgctgtacatcgtccct
gagctctgcattctctacagatcgtgtagacaggagtgccctttacaaggcaatgcctgc
cccgtcacagcctaccaacacagcttccaagtggagaaccaggagctctccagagataaa
tggaaggtcttactcaactcggacttcctatcacacagtggtgcagcccgagacagtgat
ggagctgaggaggatgtagcattaacttcatatggtactcccattcagccgcagactgtt
gatcccacacaagagtgtttcatcccacaggctaaactaagcccccagcaagatgcagga
ggagtataa

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_8|183_aa
MASKETAESCRAGAVSVAGNEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKVAKYA
GGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKIEERE
GITVYSMQFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMKPYGRRNEIWL
LKT

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_8|552_bp
atggcatcaaaggaaacagcagaaagctgcagagcaggtgctgtgagtgtggctggcaac
gaagaagttgcctatgaagaaagggcctgtgaaggcggcaaatttgccacagtagaagtg
acagataagcctgtggatgaggctctacgggaagcaatgcccaaggtcgcaaagtatgcg
gggggcaccaatgacaagggaattgggatggggatgacagtccctatttcctttgctgtg
ttccccaatgaagatggctctctgcagaagaaattaaaagtctggttccggattccaaac
caatttcaaagcgacccaccagctcccagtgacaaaagcgttaagattgaggaacgggaa
ggcatcactgtctattccatgcagtttggtggttatgccaaggaagcagactacgtagca
caagccacccgtctgcgtgctgccctggagggcacagccacctaccggggggacatctac
ttctgcacgggttatgaccctcccatgaagccctacggacggcgcaatgagatctggctg
ttgaagacatga

>gi568815586f:12808250_13012536|GENSCAN_predicted_peptide_9|224_aa
MDVNSSGHPDLYGRLCSFLLPEKLRQPSNYLIVSMALANLSVAMAVMPFISVTDLIGGKW
IFGHFFCNVFSMNVMCCTAWILTLYVISIDRFTRPPGKARPNTGYLASLEWSQTAVVTLN
GTVKFQEPDPSVYGTACSCIPLWVERIFPWLGYANSLINPFIYAFFNWDLRTTYCSRLQC
QYQNINQTLSAAGMHEALKLAERPERPEFVLQNSDYCRKKSHDS

>gi568815586f:12808250_13012536|GENSCAN_predicted_CDS_9|675_bp
atggatgttaacagcagcggccacccggacctctacgggcgcctctgctctttcctcctg
ccggagaagctccgccagccctccaactacctgatcgtgtccatggcgctggccaacctc
tcggtggccatggcggtcatgcccttcatcagtgtcaccgacctcatcgggggcaagtgg
atctttggacactttttctgtaacgtcttctccatgaatgtcatgtgctgcacggcctgg
atcttgaccttgtacgtgatcagcatcgacagatttacaaggccgccaggaaaagcgcgg
cctaacacaggttacctggcttccctcgagtggagccagacagcagtagtcaccctgaat
ggcacagtgaagttccaggagccagacccttctgtctatggcactgcctgcagctgcatc
ccactgtgggtggagaggatatttccatggctgggctatgcaaactctctcattaaccct
tttatttatgccttcttcaactgggacctgaggaccacctattgcagccggctccagtgc
cagtaccagaatatcaaccagacactctcagctgcaggcatgcatgaagccctgaagctt
gctgagaggccagagagacctgagtttgtcctacaaaactctgactactgtagaaaaaaa
agtcatgattcatga