GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:11:18

Sequence gi568815586r:10921675_11122571 : 200897 bp : 36.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7542   7663  122  0  2   51  121   133 0.170  12.12
 1.02 Intr +   8595   8630   36  1  0   89   99    15 0.501   0.02
 1.03 Term +   8988   9388  401  1  2   84   33   464 0.990  34.79
 1.04 PlyA +  10626  10631    6                               1.05

 2.06 PlyA -  12171  12166    6                               1.05
 2.05 Term -  24749  24625  125  0  2   34   49    96 0.004  -2.13
 2.04 Intr -  38483  38377  107  1  2   81   81    88 0.042   6.34
 2.03 Intr -  52047  51981   67  1  1   72   93    46 0.005   0.54
 2.02 Intr -  53118  53074   45  1  0   91   94    39 0.679   2.26
 2.01 Init -  61439  61298  142  2  1   67   64    71 0.567   2.95
 2.00 Prom -  90668  90629   40                              -2.85

 3.00 Prom +  95326  95365   40                              -3.35
 3.01 Init +  96109  96135   27  0  0  107   94     6 0.665   2.33
 3.02 Intr + 105019 105117   99  0  0   53   40    92 0.016   0.29
 3.03 Intr + 127223 127435  213  1  0   97   36   127 0.223   6.39
 3.04 Intr + 141947 142060  114  1  0   80   76    42 0.057   1.92
 3.05 Intr + 150364 150436   73  0  1   51   99     4 0.008  -4.14
 3.06 Intr + 150489 150776  288  1  0   96   61    96 0.099   3.99
 3.07 Term + 167739 167923  185  1  2   77   36   127 0.545   3.12
 3.08 PlyA + 169079 169084    6                               1.05

 4.00 Prom + 170321 170360   40                              -5.35
 4.01 Init + 170554 170776  223  0  1   55   96   124 0.239   8.67
 4.02 Term + 183687 183889  203  1  2   45   44   128 0.270   0.67
 4.03 PlyA + 185703 185708    6                               1.05

 5.00 Prom + 185803 185842   40                              -8.05
 5.01 Sngl + 189946 191151 1206  0  0   62   43   428 0.992  31.27
 5.02 PlyA + 191388 191393    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -   3292   2771  522  1  0   38   45   209 0.917   7.40
S.002 Init +   7600   7663   64  0  1   63  121    91 0.826  11.36
S.003 Sngl +  31089  31508  420  2  0   65   54   150 0.901   5.38
S.004 Init +  36689  36775   87  1  0   58   78    76 0.877   4.29
S.005 Term + 156209 156307   99  1  0   83   50    98 0.839   2.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10921675_11122571|GENSCAN_predicted_peptide_1|186_aa
XELTRFSQHKVGSDTRAFCKMLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQ
FIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGH
PPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPP
QGQSPQ

>gi568815586r:10921675_11122571|GENSCAN_predicted_CDS_1|561_bp
nnggagctgacacgtttctcccagcataaagttgggagtgacaccagagccttctgcaag
atgcttctgattctgctgtcagtggccctgctggccttcagctcagctcaggacttagat
gaagatgtcagccaagaagacgttcccttggtaatatcagatggaggagactctgagcag
ttcatagatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgct
ggtgatgggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcag
caacaaggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccat
ccccctcctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcct
cctcgaggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctccccca
cctcctcctggaaagccccagggaccacctccccaagggggccgcccacaaggacctcca
caggggcagtctcctcagtaa

>gi568815586r:10921675_11122571|GENSCAN_predicted_peptide_2|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10921675_11122571|GENSCAN_predicted_CDS_2|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga

>gi568815586r:10921675_11122571|GENSCAN_predicted_peptide_3|332_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLVEKNKVGEIGSLEQMKYA
EASNTQMLKCLVIAETLEPKILTSNLCEAKLNTVAYQCNNMTQSKPTLDTTRAKNITDKS
TLLNQECGKYVQPCCVRNSGAKSKNRWEIAKQLTRILFSGSREYPASSFCVTGTTVFVET
SSHHVAQGGLELLASIDIPNCAYQSSGIASKSHHTKPALGVFEGQMLPRFLTHVHPKVDL
ISLLLLPLPEHVIEMDKHGSWQDSHLLPDLQTLLEKVLEAKYTHLMTVMLSLSPHCEVAA
SRAIPDITTHCFTFLPVSISTRPCHFCLEFDF

>gi568815586r:10921675_11122571|GENSCAN_predicted_CDS_3|999_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggtggagaaaaataaggttggagaaattggcagtcttgagcaaatgaaatatgct
gaggctagtaacacccagatgctgaaatgcttggttattgctgagacattagaaccaaaa
attcttacttctaatctatgtgaagccaaattaaacacagttgcataccaatgtaataat
atgacccagagtaaaccaactctggacaccaccagagcaaaaaacataactgataaatca
actctgctaaaccaagagtgtgggaaatatgtacaaccttgttgtgtcaggaattcagga
gccaaaagcaaaaacagatgggaaattgcaaagcaactgactcgcatattgttttcaggt
tcaagggagtatcctgcctcatccttctgtgtaactgggactacagtttttgtagagaca
agctctcaccatgtagcccagggtggtctggaactcctggcctcaatagatattcccaac
tgtgcctaccaaagttccgggattgcaagcaagagccatcataccaagcctgcactggga
gtttttgaaggtcagatgctacctagatttttgactcatgtacatcccaaggtggatcta
atcagtttgctgttattacctcttcctgaacatgtaattgaaatggacaaacatggcagc
tggcaggactctcaccttcttcctgacctgcagacccttctggaaaaagtgctggaagcc
aagtacacgcatctgatgaccgtcatgctgtctctctcacctcactgtgaagtggctgcc
agcagagccataccagacatcaccacacattgtttcacatttcttcctgtctcaatttcc
acacgtccttgccatttttgtcttgaatttgacttctaa

>gi568815586r:10921675_11122571|GENSCAN_predicted_peptide_4|141_aa
MSEQTKKIFLNAGVVSGIGSCRWVRGLADFKREPLTFTVSVAALKDGVDPKSEQQQGLLR
REKGQSFHRVKGNPGLDLNIYVYLIPEFAGMSLFLFKFCDQCQTGKHLNMPVDEINAVFM
ENMMISKTAQINSYSNTTSLL

>gi568815586r:10921675_11122571|GENSCAN_predicted_CDS_4|426_bp
atgtctgaacagacaaaaaaaatttttttaaatgctggtgttgtgtccggaattggttcc
tgcaggtgggttcgtggtctcgctgacttcaaaagggagccactgaccttcacggtgagt
gttgctgctcttaaagatggtgtggacccaaagagtgagcaacagcaaggtttattgaga
agagagaaaggacaaagcttccacagagtgaaaggcaacccaggtcttgaccttaacatc
tatgtgtacctgattcctgaatttgcaggaatgtccttgttcctttttaaattctgtgac
caatgtcaaacaggaaagcatctcaatatgccagtggatgaaatcaatgctgtctttatg
gaaaacatgatgatttccaaaacagctcaaattaactcctattcaaacacaacgtccttg
ctgtaa

>gi568815586r:10921675_11122571|GENSCAN_predicted_peptide_5|401_aa
MYQNLWDTAKAVFRGKFIALNAHRRKWERSKVDTLASQLKELEKQEQTNLKASRRQEITK
VRAQLKEIETPKTLQKINESRSWFFEKFNKIERQLARLVKKKRENNPIDTIKNNKGDITT
DFREIQTIIREYYKHLYANTLENLEEMDKILDTYNIPSLNQEEVKSLNRPITSSETETVI
NSLATKKSPGTDIFTTKFYQRYKEEMVPFFLKLFKTLEKEGLLLNSFYEASIILIPKPDR
DTAKRENFRPISLMNIDAKILNKILASQIQQHIKRLIHQDQVVFNPGMQGWFNICKSINI
IHHINRTNDKNHMIISTDAEKAFDKIQHAFMLKTLKKLGTDGMYLKILSAIYDKPTANIL
NGQKREAFPLKIGTKQGCHLSPLLFNIVLEILARTIRKRKK

>gi568815586r:10921675_11122571|GENSCAN_predicted_CDS_5|1206_bp
atgtaccagaatctctgggacacagctaaagcagtgtttagagggaaatttatagcacta
aatgcccacaggagaaagtgggaaagatctaaagttgacaccctagcatcacaattaaaa
gaactggagaagcaagagcaaacaaatttaaaagctagcagaagacaagagataactaag
gtcagagcacaactgaaggagatagaaacacctaaaacccttcagaaaatcaatgaatcc
aggagctggttttttgaaaagttcaacaaaatagaaagacagctagccagactagtaaag
aagaaaagagagaataatccaatagacacaataaaaaataataaaggagatattaccact
gacttcagagaaatacaaactatcatcagagaatactataaacacctctatgcaaatacg
ctagaaaatttagaagaaatggataaaatactggacacatacaacatcccaagtctaaac
caggaagaagtcaaatccctgaatagaccaataacaagttctgaaactgagacagtaatt
aatagcctagcaaccaaaaaaagtccaggaacagacatattcacaaccaaattctaccag
aggtacaaagaggagatggtaccattctttctgaaactattcaaaacactggaaaaagag
ggactactccttaactcattttatgaggccagcatcatcctgattccaaaacctgataga
gacacagcaaaaagagaaaattttaggccaatatccttgatgaacatcgatgcgaaaatc
ctcaataaaatactggcaagccaaatccagcagcatataaaaaggcttatccaccaagat
caagtcgtcttcaaccctgggatgcaaggctggttcaacatatgcaaatcaataaacata
atccatcacataaacagaaccaatgacaaaaaccacatgattatctcaacagatgcagaa
aaggcctttgataaaattcaacatgccttcatgctaaaaacactcaagaaactaggtact
gatggaatgtatctcaaaatattaagtgctatttatgacaaacccacagccaatatactg
aatgggcaaaaacgggaagcattccctttgaaaatcggcacaaaacaaggatgccatctc
tcaccactcctgttcaacatagtattggaaattctggccaggacaatcaggaagagaaag
aaataa