GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:58:28

Sequence gi568815586r:10838257_11039207 : 200951 bp : 36.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     54     49    6                               1.05
 1.03 Term -   9111   8807  305  1  2   51   33   238 0.456   8.95
 1.02 Intr -  10151  10116   36  0  0  111   99    23 0.760   3.02
 1.01 Init -  11181  11118   64  0  1   66   53   102 0.865   4.18
 1.00 Prom -  11253  11214   40                              -5.35

 2.00 Prom +  13896  13935   40                              -6.25
 2.01 Sngl +  15186  15683  498  2  0   90   55   318 0.879  24.49
 2.02 PlyA +  19006  19011    6                               1.05

 3.00 Prom +  21010  21049   40                              -3.45
 3.01 Init +  25717  25809   93  0  0   95   65    46 0.194   3.43
 3.02 Term +  39859  40014  156  0  0   67   38   126 0.344   2.45
 3.03 PlyA +  40540  40545    6                               1.05

 4.09 PlyA -  40816  40811    6                               1.05
 4.08 Term -  44442  43979  464  1  2   84   33   577 0.981  46.03
 4.07 Intr -  46019  45898  122  1  2   51  116    95 0.129   7.82
 4.06 Intr -  53669  53614   56  2  2  115   32    35 0.030  -2.54
 4.05 Intr -  62031  61958   74  1  2    7  113   100 0.389   2.61
 4.04 Intr -  63098  62981  118  2  1   54   61   101 0.532   3.12
 4.03 Intr -  70996  70854  143  2  2   50   83    64 0.048   1.25
 4.02 Intr -  79731  79650   82  0  1   59   43   102 0.040   1.09
 4.01 Init -  86710  86324  387  1  0   38   41   209 0.236   8.05
 4.00 Prom -  88818  88779   40                              -4.55

 5.00 Prom +  90944  90983   40                              -7.35
 5.01 Init +  91018  91081   64  0  1   63  121    91 0.843  11.36
 5.02 Intr +  92013  92048   36  1  0   89   99    15 0.501   0.02
 5.03 Term +  92406  92806  401  1  2   84   33   464 0.990  34.79
 5.04 PlyA +  94044  94049    6                               1.05

 6.06 PlyA -  95589  95584    6                               1.05
 6.05 Term - 108167 108043  125  0  2   34   49    96 0.004  -2.13
 6.04 Intr - 121901 121795  107  1  2   81   81    88 0.042   6.34
 6.03 Intr - 135465 135399   67  1  1   72   93    46 0.005   0.54
 6.02 Intr - 136536 136492   45  1  0   91   94    39 0.679   2.26
 6.01 Init - 144857 144716  142  2  1   67   64    71 0.567   2.95
 6.00 Prom - 174086 174047   40                              -2.85

 7.00 Prom + 178744 178783   40                              -3.35
 7.01 Init + 179527 179553   27  0  0  107   94     6 0.665   2.33
 7.02 Intr + 188437 188535   99  0  0   53   40    92 0.017   0.29
 7.03 Term + 193844 193987  144  1  0  104   50    69 0.254   1.63
 7.04 PlyA + 194303 194308    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  45961  45898   64  1  1   63  116    72 0.847   8.99
S.002 Sngl + 114507 114926  420  2  0   65   54   150 0.901   5.38
S.003 Init + 120107 120193   87  1  0   58   78    76 0.877   4.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_1|134_aa
MLLVLLSVVLLALSSAQSTDNDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPG
DSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQ
RDRPARHPQEQPLW

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_1|405_bp
atgctgctggtcctgctctcagtggtccttctggctctgagctcagctcagagcacagat
aatgatgtgaactatgaagactttactttcaccataccagatgtagaggactcaagtcag
agaccagatcagggaccccagagacctcctcctgaaggactcctacctagaccccctggt
gatagtggtaaccaagatgatggtcctcagcagagaccaccaaaaccaggaggccatcac
cgccatcctcccccacctccttttcaaaatcagcaacgaccaccccgacgaggacaccgt
caactctctctaccccgatttccttctgtcagcctgcaggaagcatcatcattcttccag
agggacagaccagcaagacatccccaggagcaaccactctggtaa

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_2|165_aa
MDGPATPVSTDSNPPTQQEDSSACKCTHLEKRLFPLLLVAQLLLSPPGAAAVKCQLDPAK
WQDPQHSSICSVLHLRHWKGCEPDIGSQSTCFPEPESCLPVAADTDSNVTPATQQQRCCT
LACNLGTGPLHLLLSLLMQLGARACATGSDLTSTSSRATVNLHVP

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_2|498_bp
atggatggccctgctacacctgtgagcactgacagcaacccgcccacccagcaggaagac
agcagtgcatgtaagtgcacacaccttgagaaaaggctcttcccactgctgctggtggca
cagttgctgctgtcaccaccgggggctgcagcagtgaaatgccagttggacccagcaaag
tggcaggatcctcagcattctagcatatgcagtgttctgcacctcaggcactggaaaggc
tgtgaaccagacatagggagccaaagcacatgctttccagaaccagagagctgcctccct
gtggctgctgacacagacagcaatgtcacccccgcaacacagcagcagagatgctgcaca
cttgcatgcaacctggggacaggccctctccatctgctgctgagtctgctgatgcagctg
ggggccagagcatgtgccactggcagtgacctgacttccaccagcagcagagccactgtg
aacttgcacgtaccctga

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_3|82_aa
MDGTGGHYVKGNKPGTEKQTVHVLTYVDHTETKKPEYIEKHINETIHFPELKVNSPYRKG
PMIIQKPKFNIFRAQCKKTISG

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_3|249_bp
atggatggaactggagggcattatgttaagggaaataagccaggcacagaaaaacaaaca
gtgcatgttctcacttatgttgatcacacagagaccaagaaaccagaatatattgagaaa
cacatcaatgaaacaatacatttcccagaactaaaggttaattctccatatcgaaagggc
ccaatgattatccaaaagcccaaatttaacattttcagggctcagtgcaagaagacaatt
agtggctaa

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_4|481_aa
MNPGVGFFEKINKIDRPVARLIKKKREKNQIDPPKNDKGDITTDSTEIQTTIRENYKHLY
ANKLENLEEMDTFLDTYTLPRLNQEEFESLSIPLTGSEIEAIINSLPTKKSPGPDGITAE
FYQSYKEELAGKFQKQALISAQLLVRAFQLYLDMAEEFIIGNLSNGFIVLINCIDWVSKR
ELSSVDKLLIILAISRIGLIWEILGYWRDWPKLLIQESGGSEYLEICLLVEQNPPPPTKI
SAQVISRALEKQGTLPSEHWVAQIPSGKRYLLTFQCKASSSEGKMDRELTRFSQHKVGSD
TRASCKMLLILLSVALLAFSSAQDLNEDGGDSEQFLDEERQGPPLGGQQSQPSAGDGNQD
DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQ
GRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP
Q

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_4|1446_bp
atgaatccaggagttggtttttttgaaaagatcaacaaaattgatagaccagtagcaaga
ctaataaagaagaaaagagagaaaaatcaaatagaccccccaaaaaatgataaaggggat
atcaccactgattccacagaaatacaaactaccatcagagaaaactataaacacctctat
gcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacaccctccca
agactaaaccaggaagaatttgaatccctgagtataccactaacaggctctgaaattgag
gcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggaatcacagccgaa
ttctaccagagttacaaggaggagctggctgggaagttccaaaagcaggcactgatatct
gctcagcttctggtgagggctttccagctgtatcttgacatggcagaagaattcataatt
gggaatttgagcaatggatttatagtactgatcaactgcattgactgggtcagtaaaaga
gagctgtcctcagtcgataaactcctcattatcttggcaatctccagaattgggctgatc
tgggaaatattaggatattggagagattggcctaaactcttaatccaggagagtgggggc
tctgaatacctggaaatctgcctgcttgtggagcagaacccacccccaccaaccaagatt
tctgcacaggttatctccagggctttggagaaacaaggtactcttccctctgagcactgg
gttgctcagatccccagtggaaagagatatttgcttacattccagtgtaaagcttcttct
tcagaaggcaagatggacagggagctgacacgtttctcccagcacaaagttgggagtgac
accagagcctcctgcaagatgcttctgattctgctgtcagtggccctgctggccttcagc
tcagctcaggatttaaatgaagatggaggagactctgagcagttcctagatgaggagcgt
cagggaccacctttgggaggacagcaatctcaaccctctgctggtgatgggaaccaggat
gatggccctcagcagggaccaccccaacaaggaggccagcagcaacaaggtccaccacct
cctcagggaaagccacaaggaccaccccaacaaggaggccagcagcaacaaggtccacca
cctcctcagggaaagccacaaggaccaccccaacagggaggccatccccctcctcctcaa
ggaaggccacaaggaccaccccaacagggaggccatccccgtcctcctcgaggaaggcca
caaggaccaccccaacagggaggccatcagcaaggtcctcccccacctcctcctggaaag
ccccagggaccacctccccaagggggccgcccacaaggacctccacaggggcagtctcct
cagtaa

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_5|166_aa
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_5|501_bp
atgcttctgattctgctgtcagtggccctgctggccttcagctcagctcaggacttagat
gaagatgtcagccaagaagacgttcccttggtaatatcagatggaggagactctgagcag
ttcatagatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgct
ggtgatgggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcag
caacaaggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccat
ccccctcctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcct
cctcgaggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctccccca
cctcctcctggaaagccccagggaccacctccccaagggggccgcccacaaggacctcca
caggggcagtctcctcagtaa

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_6|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_6|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga

>gi568815586r:10838257_11039207|GENSCAN_predicted_peptide_7|89_aa
MPSRNILFKTGYRMNADYQKLKSTLTNAFQDVLSSLSRAELLAGIIHTEIDVKPESSFAS
TQIGTYSLSVFAIFPCVTSPSFIFSDFSC

>gi568815586r:10838257_11039207|GENSCAN_predicted_CDS_7|270_bp
atgccgagcagaaacatcctgtttaagacgggttatagaatgaatgcagactaccagaaa
cttaaatcaacactcacaaatgctttccaggatgtgctgtcttcactaagcagagcagag
cttctggctggaattattcacactgaaattgacgtgaaacctgaatcctcatttgctagt
acgcaaatagggacatattcactttcagtgtttgcaatttttccttgtgtaacctctcca
tcatttatctttagtgacttcagttgttag