GENSCAN 1.0	Date run:  7-Nov-116	Time: 23:48:18

Sequence gi568815586r:10808390_11009298 : 200909 bp : 36.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    528    523    6                              -0.45
 1.03 Term -   1070    748  323  0  2  108   44   161 0.502   7.70
 1.02 Intr -   7758   7605  154  0  1   74   24   115 0.450   2.42
 1.01 Init -   8603   8451  153  2  0   67   81    55 0.333   2.74
 1.00 Prom -  27987  27948   40                              -0.35

 2.04 PlyA -  28075  28070    6                               1.05
 2.03 Term -  38978  38674  305  0  2   51   33   238 0.402   8.95
 2.02 Intr -  40018  39983   36  2  0  111   99    23 0.748   3.02
 2.01 Init -  41048  40985   64  2  1   66   53   102 0.855   4.18
 2.00 Prom -  41120  41081   40                              -5.35

 3.00 Prom +  43763  43802   40                              -6.25
 3.01 Sngl +  45053  45550  498  1  0   90   55   318 0.879  24.49
 3.02 PlyA +  48873  48878    6                               1.05

 4.00 Prom +  50877  50916   40                              -3.45
 4.01 Init +  55584  55676   93  2  0   95   65    46 0.194   3.43
 4.02 Term +  69726  69881  156  2  0   67   38   126 0.344   2.45
 4.03 PlyA +  70407  70412    6                               1.05

 5.09 PlyA -  70683  70678    6                               1.05
 5.08 Term -  74309  73846  464  0  2   84   33   577 0.981  46.03
 5.07 Intr -  75886  75765  122  0  2   51  116    95 0.129   7.82
 5.06 Intr -  83536  83481   56  1  2  115   32    35 0.030  -2.54
 5.05 Intr -  91898  91825   74  0  2    7  113   100 0.389   2.61
 5.04 Intr -  92965  92848  118  1  1   54   61   101 0.532   3.12
 5.03 Intr - 100863 100721  143  1  2   50   83    64 0.048   1.25
 5.02 Intr - 109598 109517   82  2  1   59   43   102 0.040   1.09
 5.01 Init - 116577 116191  387  0  0   38   41   209 0.236   8.05
 5.00 Prom - 118685 118646   40                              -4.55

 6.00 Prom + 120811 120850   40                              -7.35
 6.01 Init + 120885 120948   64  2  1   63  121    91 0.843  11.36
 6.02 Intr + 121880 121915   36  0  0   89   99    15 0.501   0.02
 6.03 Term + 122273 122673  401  0  2   84   33   464 0.990  34.79
 6.04 PlyA + 123911 123916    6                               1.05

 7.06 PlyA - 125456 125451    6                               1.05
 7.05 Term - 138034 137910  125  2  2   34   49    96 0.004  -2.13
 7.04 Intr - 151768 151662  107  0  2   81   81    88 0.042   6.34
 7.03 Intr - 165332 165266   67  0  1   72   93    46 0.005   0.54
 7.02 Intr - 166403 166359   45  0  0   91   94    39 0.682   2.26
 7.01 Init - 174724 174583  142  1  1   67   64    71 0.573   2.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  75828  75765   64  0  1   63  116    72 0.847   8.99
S.002 Sngl + 144374 144793  420  1  0   65   54   150 0.901   5.38
S.003 Init + 149974 150060   87  0  0   58   78    76 0.877   4.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_1|209_aa
MEFHDATLSCFWVPVVLEPEPTELGVVALGQIWMQPKVQPGVIMTPREAPKETGCSQGAA
CPSCIPQVLRILHFQAEEAGLEHPSISSAFSSHQTLLTRAWDFRHTKQIRLHATGFRDPS
TEAHMRAIKAVIIFLLLLIVYYPVFLVMTSSALIPQGKLVLMIGDIVTVIFPSSHSFILI
MGNSKLREAFLKMLRFVKCFLRRRKPFVP

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_1|630_bp
atggaattccatgatgccactctttcctgcttctgggtccctgtagtcttagagccagag
cccacagagctgggggtggtggcattggggcagatctggatgcagcccaaggtacagcca
ggagtgattatgactcctagagaagctcctaaggagactggatgttctcaaggagcagcc
tgtccatcttgcatcccccaggttctccggattctccatttccaagcagaagaagcagga
ctggagcacccttccatatcatcagccttctcctcgcaccagaccttactcaccagggcc
tgggactttagacacaccaagcagattcgactgcatgctacagggttcagagaccccagt
acagaggcccacatgagggccataaaggcagtgatcatctttctgctcctcctcatcgtg
tactacccagtctttcttgttatgacctctagcgctctgattcctcagggaaaattagtg
ttgatgattggtgacatagtaactgtcattttcccatcaagccattcattcattctaatt
atgggaaatagcaagttgagggaagcttttctgaagatgttaagatttgtgaagtgtttc
cttagaagaagaaagccttttgttccatag

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_2|134_aa
MLLVLLSVVLLALSSAQSTDNDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPG
DSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQ
RDRPARHPQEQPLW

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_2|405_bp
atgctgctggtcctgctctcagtggtccttctggctctgagctcagctcagagcacagat
aatgatgtgaactatgaagactttactttcaccataccagatgtagaggactcaagtcag
agaccagatcagggaccccagagacctcctcctgaaggactcctacctagaccccctggt
gatagtggtaaccaagatgatggtcctcagcagagaccaccaaaaccaggaggccatcac
cgccatcctcccccacctccttttcaaaatcagcaacgaccaccccgacgaggacaccgt
caactctctctaccccgatttccttctgtcagcctgcaggaagcatcatcattcttccag
agggacagaccagcaagacatccccaggagcaaccactctggtaa

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_3|165_aa
MDGPATPVSTDSNPPTQQEDSSACKCTHLEKRLFPLLLVAQLLLSPPGAAAVKCQLDPAK
WQDPQHSSICSVLHLRHWKGCEPDIGSQSTCFPEPESCLPVAADTDSNVTPATQQQRCCT
LACNLGTGPLHLLLSLLMQLGARACATGSDLTSTSSRATVNLHVP

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_3|498_bp
atggatggccctgctacacctgtgagcactgacagcaacccgcccacccagcaggaagac
agcagtgcatgtaagtgcacacaccttgagaaaaggctcttcccactgctgctggtggca
cagttgctgctgtcaccaccgggggctgcagcagtgaaatgccagttggacccagcaaag
tggcaggatcctcagcattctagcatatgcagtgttctgcacctcaggcactggaaaggc
tgtgaaccagacatagggagccaaagcacatgctttccagaaccagagagctgcctccct
gtggctgctgacacagacagcaatgtcacccccgcaacacagcagcagagatgctgcaca
cttgcatgcaacctggggacaggccctctccatctgctgctgagtctgctgatgcagctg
ggggccagagcatgtgccactggcagtgacctgacttccaccagcagcagagccactgtg
aacttgcacgtaccctga

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_4|82_aa
MDGTGGHYVKGNKPGTEKQTVHVLTYVDHTETKKPEYIEKHINETIHFPELKVNSPYRKG
PMIIQKPKFNIFRAQCKKTISG

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_4|249_bp
atggatggaactggagggcattatgttaagggaaataagccaggcacagaaaaacaaaca
gtgcatgttctcacttatgttgatcacacagagaccaagaaaccagaatatattgagaaa
cacatcaatgaaacaatacatttcccagaactaaaggttaattctccatatcgaaagggc
ccaatgattatccaaaagcccaaatttaacattttcagggctcagtgcaagaagacaatt
agtggctaa

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_5|481_aa
MNPGVGFFEKINKIDRPVARLIKKKREKNQIDPPKNDKGDITTDSTEIQTTIRENYKHLY
ANKLENLEEMDTFLDTYTLPRLNQEEFESLSIPLTGSEIEAIINSLPTKKSPGPDGITAE
FYQSYKEELAGKFQKQALISAQLLVRAFQLYLDMAEEFIIGNLSNGFIVLINCIDWVSKR
ELSSVDKLLIILAISRIGLIWEILGYWRDWPKLLIQESGGSEYLEICLLVEQNPPPPTKI
SAQVISRALEKQGTLPSEHWVAQIPSGKRYLLTFQCKASSSEGKMDRELTRFSQHKVGSD
TRASCKMLLILLSVALLAFSSAQDLNEDGGDSEQFLDEERQGPPLGGQQSQPSAGDGNQD
DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQ
GRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSP
Q

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_5|1446_bp
atgaatccaggagttggtttttttgaaaagatcaacaaaattgatagaccagtagcaaga
ctaataaagaagaaaagagagaaaaatcaaatagaccccccaaaaaatgataaaggggat
atcaccactgattccacagaaatacaaactaccatcagagaaaactataaacacctctat
gcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacaccctccca
agactaaaccaggaagaatttgaatccctgagtataccactaacaggctctgaaattgag
gcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggaatcacagccgaa
ttctaccagagttacaaggaggagctggctgggaagttccaaaagcaggcactgatatct
gctcagcttctggtgagggctttccagctgtatcttgacatggcagaagaattcataatt
gggaatttgagcaatggatttatagtactgatcaactgcattgactgggtcagtaaaaga
gagctgtcctcagtcgataaactcctcattatcttggcaatctccagaattgggctgatc
tgggaaatattaggatattggagagattggcctaaactcttaatccaggagagtgggggc
tctgaatacctggaaatctgcctgcttgtggagcagaacccacccccaccaaccaagatt
tctgcacaggttatctccagggctttggagaaacaaggtactcttccctctgagcactgg
gttgctcagatccccagtggaaagagatatttgcttacattccagtgtaaagcttcttct
tcagaaggcaagatggacagggagctgacacgtttctcccagcacaaagttgggagtgac
accagagcctcctgcaagatgcttctgattctgctgtcagtggccctgctggccttcagc
tcagctcaggatttaaatgaagatggaggagactctgagcagttcctagatgaggagcgt
cagggaccacctttgggaggacagcaatctcaaccctctgctggtgatgggaaccaggat
gatggccctcagcagggaccaccccaacaaggaggccagcagcaacaaggtccaccacct
cctcagggaaagccacaaggaccaccccaacaaggaggccagcagcaacaaggtccacca
cctcctcagggaaagccacaaggaccaccccaacagggaggccatccccctcctcctcaa
ggaaggccacaaggaccaccccaacagggaggccatccccgtcctcctcgaggaaggcca
caaggaccaccccaacagggaggccatcagcaaggtcctcccccacctcctcctggaaag
ccccagggaccacctccccaagggggccgcccacaaggacctccacaggggcagtctcct
cagtaa

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_6|166_aa
MLLILLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSA
GDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRP
PRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQSPQ

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_6|501_bp
atgcttctgattctgctgtcagtggccctgctggccttcagctcagctcaggacttagat
gaagatgtcagccaagaagacgttcccttggtaatatcagatggaggagactctgagcag
ttcatagatgaggagcgtcagggaccacctttgggaggacagcaatctcaaccctctgct
ggtgatgggaaccagaatgatggccctcagcagggaccaccccaacaaggaggccagcag
caacaaggtccaccacctcctcagggaaagccacaaggaccaccccaacagggaggccat
ccccctcctcctcaaggaaggccacaaggaccaccccaacagggaggccatccccgtcct
cctcgaggaaggccacaaggaccaccccaacagggaggccatcagcaaggtcctccccca
cctcctcctggaaagccccagggaccacctccccaagggggccgcccacaaggacctcca
caggggcagtctcctcagtaa

>gi568815586r:10808390_11009298|GENSCAN_predicted_peptide_7|161_aa
MHACSNFEFCYIIWHNGQATWARLYICYRARFCFGFDLRQAALANSFTWSRTIAAELVWL
FGAAAEEYFACWNLLYLLKSGSFHSYLAKYEASSTIGLSAQSNEAVAVTTSLNLTFVKIT
NKLENLEEIDKFLDTYTLPAAGSQRPQTEGPAEAMAEEHKL

>gi568815586r:10808390_11009298|GENSCAN_predicted_CDS_7|486_bp
atgcatgcctgtagcaactttgaattctgttacatcatctggcacaatggccaagcaact
tgggccagactctatatctgctatagagcccgtttttgtttcgggtttgacttgagacaa
gcagcccttgcaaactcctttacctggtcaagaaccattgctgctgaactagtgtggttg
tttggagctgctgcagaagaatattttgcctgctggaacctgctgtatctactcaagagt
ggaagttttcacagttatttagcaaagtatgaagcctcttcaactattggcctatcagcc
caatccaatgaggctgttgctgtcaccacttcattaaatctgacatttgttaagatcacc
aacaaactagaaaacctagaagagatagataaattcctggacacatacaccctccctgct
gctggaagtcagagaccccaaacggagggaccagctgaagccatggcagaagaacataaa
ttgtga