GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:58:17

Sequence gi568815586r:4270346_4479582 : 209237 bp : 43.98% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1947   2029   83  0  2  119   85     4 0.509   2.48
 1.02 Intr +   2501   2660  160  0  1   73  -63   176 0.533   0.05
 1.03 Intr +   2804   2908  105  2  0   80   59    83 0.577   3.93
 1.04 Intr +   3656   3890  235  2  1   37   92   457 0.629  38.69
 1.05 Intr +   5660   5875  216  1  0   98   55   222 0.999  18.60
 1.06 Intr +   8415   8574  160  2  1  111  111   289 0.999  33.06
 1.07 Intr +   9398   9479   82  0  1   82   66    25 0.534  -1.60
 1.08 Intr +  13866  13978  113  0  2   50   93    65 0.317   3.22
 1.09 Intr +  18497  18645  149  0  2  137   66   187 0.864  21.35
 1.10 Intr +  19886  20104  219  1  0   50   76    81 0.639   1.60
 1.11 Term +  29515  29664  150  0  0   81   55   278 0.909  21.71
 1.12 PlyA +  29841  29846    6                               1.05

 2.03 PlyA -  30311  30306    6                               1.05
 2.02 Term -  54408  54027  382  2  1   28   40   838 0.981  67.31
 2.01 Init -  57558  57554    5  0  2   76   55     0 0.203  -5.03
 2.00 Prom -  61648  61609   40                              -1.06

 3.00 Prom +  66415  66454   40                              -4.66
 3.01 Init +  73301  73966  666  1  0   66   41   305 0.111  18.83
 3.02 Term +  74675  75607  933  1  0   12   47   280 0.120   8.43
 3.03 PlyA +  75655  75660    6                              -0.45

 4.00 Prom +  75938  75977   40                              -3.26
 4.01 Init +  79477  79551   75  0  0   71   96    52 0.619   5.39
 4.02 Intr +  80922  81032  111  2  0   40   91   105 0.814   6.58
 4.03 Intr +  81915  82118  204  2  0  133   62    22 0.809   3.50
 4.04 Term +  84093  84110   18  2  0   99   47    -9 0.101  -5.58
 4.05 PlyA +  84214  84219    6                               1.05

 5.03 PlyA -  84244  84239    6                               1.05
 5.02 Term -  85528  85402  127  0  1  112   47   114 0.981   7.46
 5.01 Init -  97322  97261   62  2  2   61  113    30 0.287   3.52
 5.00 Prom -  97546  97507   40                              -7.06

 6.06 PlyA -  98054  98049    6                               1.05
 6.05 Term - 100438  99998  441  1  0  109   46   584 0.998  51.56
 6.04 Intr - 102352 102249  104  2  2  121   70    36 0.945   4.99
 6.03 Intr - 109193 109027  167  1  2   81   79   122 0.029  10.20
 6.02 Intr - 121574 121454  121  0  1   79   52    59 0.081   0.95
 6.01 Init - 154885 154804   82  1  1   89   98    43 0.506   4.68
 6.00 Prom - 157693 157654   40                              -4.86

 7.10 PlyA - 157832 157827    6                               1.05
 7.09 Term - 158608 158454  155  2  2  134   44    49 0.858   3.18
 7.08 Intr - 159043 158863  181  1  1   92   42    48 0.782   0.04
 7.07 Intr - 164046 163933  114  0  0  102   70   173 0.738  17.54
 7.06 Intr - 173891 173788  104  0  2   87  113    52 0.955   7.49
 7.05 Intr - 174417 174373   45  1  0  108   49    39 0.562   0.38
 7.04 Intr - 175140 174880  261  1  0   94   79   311 0.591  28.26
 7.03 Intr - 178228 178118  111  2  0   72   47    87 0.726   3.35
 7.02 Intr - 181242 181102  141  1  0   59  110    95 0.928   9.12
 7.01 Init - 197277 197253   25  0  1   76   97    29 0.063   0.57

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_1|557_aa
XEPSVRLTQPAPHPALLALRAPARAPSLESCIGVATLSADTSGGLSADAGARKRVFPAWP
LAAGEPLGALPPACGGPRRCTAGGQKGRCSGPFNRGFRNSFEVIRNTDFRDMTFISGPGK
AGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKD
IQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLAS
KLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQ
REKLSLIRKHAQTFIALCATVAMAETLEPYSSKGEMSGVHVLTIRNLRHCAFTRIILSES
SEQHYNVGIAVVIICRSENENSERSDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTC
DALTELLAKITNTDVLREMAQGDADGANPGSSSEIVRRYGFKMRAPNIRFLNEDSRTQTE
NLPPVQHEECFSNPPEENRGRDLTFIEMDCLKACQEQIEAVLLNSLQQYRQDQRDGSKSE
DELDQASTPTDVRDIDL

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_1|1674_bp
nnggaacctagtgtacggctcacccagcccgcgccccaccccgccttgctggctctccgc
gcccctgcccgggccccctctctcgaaagctgcatcggtgtggccacgctcagcgcagac
acctcgggcggcttgtcagcagatgcaggggcgaggaagcgggtttttcctgcgtggccg
ctggccgcgggggaaccgctgggagccctgcccccggcctgcggcggccctagacgctgc
accgcgggggggcagaagggacgttgttctggtccctttaatcggggctttcgaaacagc
ttcgaagttatcaggaacacagacttcagggacatgacctttatctctgggccggggaaa
gcaggagggagaggggccgccgggctggccatggagctgctgtgccacgaggtggacccg
gtccgcagggccgtgcgggaccgcaacctgctccgagacgaccgcgtcctgcagaacctg
ctcaccatcgaggagcgctaccttccgcagtgctcctacttcaagtgcgtgcagaaggac
atccaaccctacatgcgcagaatggtggccacctggatgctggaggtctgtgaggaacag
aagtgcgaagaagaggtcttccctctggccatgaattacctggaccgtttcttggctggg
gtcccgactccgaagtcccatctgcaactcctgggtgctgtctgcatgttcctggcctcc
aaactcaaagagaccagcccgctgaccgcggagaagctgtgcatttacaccgacaactcc
atcaagcctcaggagctgctggagtgggaactggtggtgctggggaagttgaagtggaac
ctggcagctgtcactcctcatgacttcattgagcacatcttgcgcaagctgccccagcag
cgggagaagctgtctctgatccgcaagcatgctcagaccttcattgctctgtgtgccacc
gtggccatggcagagaccctggaaccttactcatccaagggagagatgtcaggagttcat
gttttgacaatcagaaaccttaggcactgtgcttttacaaggattattttaagtgaatcc
tcagaacagcactacaacgtgggtattgctgttgtcattatttgcagatcagaaaatgaa
aactcagagaggtcagactttaagtttgccatgtacccaccgtcgatgatcgcaactgga
agtgtgggagcagccatctgtgggctccagcaggatgaggaagtgagctcgctcacttgt
gatgccctgactgagctgctggctaagatcaccaacacagacgtgctcagagaaatggcg
cagggagatgctgacggagcaaatccggggtcctcctctgagatagttcgtagatatggt
tttaaaatgcgggctccaaacatacgctttttaaacgaggactccagaacacagactgaa
aacctccctccagtgcagcatgaagaatgcttttctaatcctccagaggaaaatcgtgga
cgggacttaacgtttatagaaatggattgtctcaaagcttgccaggagcagattgaggcg
gtgctcctcaatagcctgcagcagtaccgtcaggaccaacgtgacggatccaagtcggag
gatgaactggaccaagccagcacccctacagacgtgcgggatatcgacctgtga

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_2|128_aa
MRLGPAAGRDVSCEQLTQLYSACQRPQVNPGLRRKQNSLLKRLRKAKKEAPPMEKPEVVK
THLRDMIILPKMVGSMVGVYNGKTFNQVEIKPEMISHYLGEFSITYKLVKHCRPGIGATH
SSRFIPLK

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_2|387_bp
atgagacttggaccagctgcgggacgggacgtgtcctgcgagcagctgacgcagctgtac
agtgcgtgccagcggccgcaagtgaacccgggcctgcggcggaaacagaactcgctgctg
aagcgcctgcgcaaggccaagaaggaggcaccgcccatggagaagccggaagtggtgaag
acgcacctgcgggacatgatcatcctgcccaagatggtgggcagcatggtgggcgtctac
aacggcaagaccttcaaccaggtggagatcaagccggagatgatcagtcactacctgggc
gagttctccatcacctataagctggtgaagcactgccggcccggcatcggggccacccac
tcctcccgcttcatccccctcaagtag

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_3|532_aa
MKAEIKMFFETNENKETTYQNLWDTFKAVCRGKFIALNAHRRKQERSKVGTLTSQLKELE
KQEQTNSKASRRQEITKIRAELEETETQKTLPKINESRSWFFEKINKIDRPLARPIKKRE
KNQMEAIKNDKGDITTDPTEIRTTIREYYKHLYTNKLESLEEMDKFLDTYTLPRLKQEEV
ESLIRPVTGSEIEAIINSLPTKKSPGPDGFTAEFFQRYKEELRIKYLGIQLTRDMKDLFK
EHYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMAILPKVIYRFNAIPFELPMTFFTDLEK
TTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLCYKATVTKTAWYWYQNRDIDQWNRT
EPSEIIPHIYNYLNFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSR
WSKDLHVRPKTIKTLEENLGNTIQDIGMGKDFMTKTPKAMATKAKVDEWDLIKLKSFCTA
KETTIRVNRQPTEWEKIFPIYSSDKGLISRIYKELKQICKKKTTPSTSGQRI

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_3|1599_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagagacaacataccag
aatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatgctcac
aggagaaagcaggaaagatctaaagttggcaccctaacatcacaattgaaagaactagag
aagcaagagcaaacaaattcaaaagctagcagaaggcaagaaataactaagatcagagca
gaactggaggagacagagacacaaaaaacccttccaaaaatcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagaccgctagcaagaccaataaagaaaagagag
aagaatcaaatggaagcaataaaaaatgataaaggggatatcaccacagatcccacagaa
atacgaactaccatcagagaatactataaacacctctacacaaataaactagaaagtcta
gaagaaatggataaattcctcgacacctacaccctcccaagactaaaacaggaagaagtt
gaatctctgattagaccagtaacaggctctgaaattgaggcaataattaatagcttacca
accaaaaaaagtccaggaccagacggattcacagccgaattcttccagaggtacaaggag
gagctgaggataaaatacctaggaatccaacttacaagggatatgaaggacctcttcaag
gagcactataaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaatt
tatagattcaatgccatccccttcgagctaccaatgactttcttcacagacttggaaaaa
actactttaaagttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacgctacctgacttcaaactatgctacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaaca
gagccctcagaaataataccacacatctacaactatctgaactttgacaaacctgacaaa
aacaagaaatggggaaaggattccctattcaacaaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaaga
tggagtaaagacttacatgttagacctaaaaccataaaaaccctagaagaaaacctaggc
aataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatg
gcaacaaaagccaaagttgacgaatgggatctaattaaactaaagagcttctgcacagca
aaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttccaatc
tactcatctgacaaagggcttatatccagaatctacaaagaactcaaacaaatttgcaag
aaaaaaacaaccccatcaacaagtgggcaaaggatatga

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_4|135_aa
MHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPPGGETL
DQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKVNSDSG
IPGLAASVLVRQPLQ

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_4|408_bp
atgcatggaattttggagagaagcaaattttgcaaagatatgacggtaaagtatgactca
agacttcgggaaaggaaatacggggttgtagaaggcaaagcgctaagtgagctgagggcc
atggccaaagcagccagggaagagtgccctgtgtttacaccgcccggaggagagacgctg
gaccaggtgaaaatgcgtggaatagacttttttgaatttctttgtcaactaatcctgaaa
gaagcggatcaaaaagaacagttttcccaaggatctccaagcaactgtctggaaacttct
ttggcagagatatttcctttaggaaaaaatcacagctctaaagttaattcagacagcggt
attccaggattagcagccagtgtcttagttaggcagccactgcagtga

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_5|62_aa
MSIHYRSFAKDWVAHARGKIRAADLTSFSADTIESSLPILDKAAFLPPVSIPLTLTYFAQ
QH

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_5|189_bp
atgagcattcactacaggtccttcgccaaagactgggtagcacatgcacgaggtaagata
cgagcagcagatcttacatccttcagtgctgacaccatcgagtcctccctgcccatcctg
gataaagcagcattcctcccaccagtctccatcccccttactctgacctattttgctcaa
cagcactga

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_6|304_aa
MPGRKEVHVCGPSAVAHACKLSTLADQVPALGPPRAHPGGFSPEDTFLETGTFIEEGCGV
TDKDLNSDVCSMSVLRAYPNASPLLGSSWGGLIHLYTATARNSYHLQIHKNGHVDGAPHQ
TIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFGSHYFDPENCRFQHQTLENGYDVY
HSPQYHFLVSLGRAKRAFLPGMNPPPYSQFLSRRNEIPLIHFNTPIPRRHTRSAEDDSER
DPLNVLKPRARMTPAPASCSQELPSAEDNSPMASDPLGVVRGGRVNTHAGGTGPEGCRPF
AKFI

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_6|915_bp
atgcctggacggaaagaagtccacgtttgtgggccgagcgcggtggctcatgcctgtaaa
ctcagcactttggcagaccaagtccctgcccttggcccgccacgtgcccatcctggtggc
ttcagtcctgaagatacgttcttggaaacagggacattcatagaagagggctgtggggtc
actgacaaagatctgaattcagacgtctgcagcatgagcgtcctcagagcctatcccaat
gcctccccactgctcggctccagctggggtggcctgatccacctgtacacagccacagcc
aggaacagctaccacctgcagatccacaagaatggccatgtggatggcgcaccccatcag
accatctacagtgccctgatgatcagatcagaggatgctggctttgtggtgattacaggt
gtgatgagcagaagatacctctgcatggatttcagaggcaacatttttggatcacactat
ttcgacccggagaactgcaggttccaacaccagacgctggaaaacgggtacgacgtctac
cactctcctcagtatcacttcctggtcagtctgggccgggcgaagagagccttcctgcca
ggcatgaacccacccccgtactcccagttcctgtcccggaggaacgagatccccctaatt
cacttcaacacccccataccacggcggcacacccggagcgccgaggacgactcggagcgg
gaccccctgaacgtgctgaagccccgggcccggatgaccccggccccggcctcctgttca
caggagctcccgagcgccgaggacaacagcccgatggccagtgacccattaggggtggtc
aggggcggtcgagtgaacacgcacgctgggggaacgggcccggaaggctgccgccccttc
gccaagttcatctag

>gi568815586r:4270346_4479582|GENSCAN_predicted_peptide_7|378_aa
MDILGGGIEGWPLFENNASSEIHGFKAFNSTTLIQTFHKLYCMAGTVLRSEDTETEHLRN
LGCLLLHMLAAITTYAVADGNEELEAHVSLPHRILVGMVVPSPAGTRANNTLLDSRGWGT
LLSRSRAGLAGEIAGVNWESGYLVGIKRQRRLYCNVGIGFHLQVLPDGRISGTHEENPYS
SYPASCLQAASLLYGLLEISTVERGVVSLFGVRSALFVAMNSKGRLYATPSFQEECKFRE
TLLPNNYNAYESDLYQGTYIALSKYGRNRWRMRLCPKQVLNLVHHADSQRRTMFVYLIER
LKFRHQRAVSCVVSSFCKSLSTSGWSQGRQAKRTRKHRFMVLLIIKAGRSPVAYSVQLPC
SLPMGKLAQEGEDSDGRL

>gi568815586r:4270346_4479582|GENSCAN_predicted_CDS_7|1137_bp
atggacatcttggggggggggatcgagggctggcccttgtttgagaataacgcgtctagt
gaaatccatggatttaaagcctttaattcaacaacacttattcaaacatttcataaactg
tattgcatggcgggcacggtgctccgttctgaagatacagagacagaacatttgaggaat
ctgggctgcctgcttctgcatatgttagcagccatcacaacatatgctgtggcggatggc
aatgaagaactggaagcccacgtgtctctcccacaccgcatcctagtgggcatggtggtg
ccctcgcctgcaggcacccgtgccaacaacacgctgctggactcgaggggctggggcacc
ctgctgtccaggtctcgcgccgggctagctggagagattgccggggtgaactgggaaagt
ggctatttggtggggatcaagcggcagcggaggctctactgcaacgtgggcatcggcttt
cacctccaggtgctccccgacggccggatcagcgggacccacgaggagaacccctacagt
tcttatcctgcaagctgcctgcaagctgccagcttgctgtatggcctgctggaaatttcc
actgtggagcgaggcgtggtgagtctctttggagtgagaagtgccctcttcgttgccatg
aacagtaaaggaagattgtacgcaacgcccagcttccaagaagaatgcaagttcagagaa
accctcctgcccaacaattacaatgcctacgagtcagacttgtaccaagggacctacatt
gccctgagcaaatacggacggaacaggtggaggatgcgattatgccccaagcaggtcctg
aatctggtccatcatgcagatagccaacgcagaaccatgtttgtatacctcattgaacga
ctgaaattccggcaccagagagctgtgtcctgcgtggtttcctctttctgtaaatcgctg
agtacctcaggctggtcccagggaaggcaggcaaagagaacccgaaagcaccgattcatg
gtgctcttgattattaaggcaggaagaagtcctgtggcgtactcagtccaactaccctgt
agcttgccaatggggaaattggcccaggagggtgaagacagcgatggaagactatag