GENSCAN 1.0	Date run:  3-Jul-120	Time: 20:43:09

Sequence gi568815587f:89077954_89395363 : 317410 bp : 35.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  21794  21833   40                              -3.55
 1.01 Init +  29738  29894  157  1  1   61   80   182 0.722  14.82
 1.02 Intr +  64344  64437   94  1  1   14   87   118 0.229   2.40
 1.03 Term +  90512  90641  130  2  1   66   38   113 0.042   0.77
 1.04 PlyA +  90791  90796    6                               1.05

 2.00 Prom +  98630  98669   40                              -6.65
 2.01 Init + 100001 100819  819  1  0   59  110   559 0.726  47.95
 2.02 Intr + 113249 113465  217  1  1   35   84   171 0.782   8.55
 2.03 Term + 131638 131948  311  2  2   34   42   249 0.023   9.14
 2.04 PlyA + 132431 132436    6                               1.05

 3.00 Prom + 138219 138258   40                              -4.95
 3.01 Init + 154403 154476   74  1  2   78   23   102 0.429   3.29
 3.02 Intr + 168803 168963  161  2  2   35   87   179 0.583  11.21
 3.03 Intr + 206820 207001  182  1  2   81  103   106 0.356  10.07
 3.04 Term + 210485 210568   84  1  0   94   43    32 0.103  -4.03
 3.05 PlyA + 211696 211701    6                               1.05

 4.04 PlyA - 212502 212497    6                               1.05
 4.03 Term - 216140 215788  353  0  2   37   32   299 0.668  12.86
 4.02 Intr - 237332 235761 1572  0  0   72   60   337 0.385  17.36
 4.01 Init - 238917 237483 1435  0  1   44   40   569 0.420  39.02
 4.00 Prom - 239010 238971   40                              -6.15

 5.02 PlyA - 239179 239174    6                               1.05
 5.01 Sngl - 240423 239830  594  0  0   88   49   581 0.999  50.14
 5.00 Prom - 244984 244945   40                              -6.35

 6.00 Prom + 246670 246709   40                              -6.45
 6.01 Sngl + 250003 250254  252  0  0   64   38   268 0.996  14.25
 6.02 PlyA + 250593 250598    6                               1.05

 7.08 PlyA - 252037 252032    6                               1.05
 7.07 Term - 252667 252601   67  0  1  109   43    20 0.031  -3.97
 7.06 Intr - 257992 257892  101  1  2   52  110    38 0.099   0.39
 7.05 Intr - 259562 259494   69  2  0   97   91    62 0.689   5.86
 7.04 Intr - 263923 263830   94  0  1   52  115    16 0.411  -0.25
 7.03 Intr - 264240 264121  120  2  0   83   28   130 0.778   5.19
 7.02 Intr - 287120 287022   99  1  0   97   74    58 0.243   3.61
 7.01 Init - 289540 289464   77  1  2   46  100    45 0.546   2.11
 7.00 Prom - 294035 293996   40                              -6.15

 8.00 Prom + 304952 304991   40                              -2.75
 8.01 Init + 307260 307406  147  2  0   50   65    93 0.865   3.34
 8.02 Intr + 307728 307901  174  2  0   60   86   130 0.926   9.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_1|126_aa
MAVHECDELIKTKERNTTKRREEEAVKLTNGQKQFVFPLNRVKNVIIIHEASANNEIQSE
NGRVTGIDREGEMERWCMPVSVPRQWLPASFCKATDPASRLSRYSDLLCVPVQLFIALAL
HSQCTA

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_1|381_bp
atggctgtgcatgagtgtgatgaattaatcaagaccaaggaaagaaacaccacaaagagg
cgagaggaagaagctgtgaagctcacaaatggccagaaacagtttgtgttcccactaaac
agggtgaaaaacgtcatcataattcatgaagcatcagcaaataacgagattcagtcagaa
aatggtcgtgtgactggaattgatagagaaggagaaatggagaggtggtgtatgcctgtg
agtgtgccgagacagtggttgcctgcatccttctgtaaggccacagatcctgccagcagg
ctcagtcgatacagtgatcttctctgtgttccagttcaattgttcattgcccttgccctt
cattcccagtgtactgcgtga

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_2|448_aa
MLLAVLYCLLWSFQTSAGHFPRACVSSKNLMEKECCPPWSGDRSPCGQLSGRGSCQNILL
SNAPLGPQFPFTGVDDRESWPSVFYNRTCQCSGNFMGFNCGNCKFGFWGPNCTERRLLVR
RNIFDLSAPEKDKFFAYLTLAKHTISSDYVIPIGTYGQMKNGSTPMFNDINIYDLFVWMH
YYVSMDALLGGSEIWRDIDFAHEAPAFLPWHRLFLLRWEQEIQKLTGDENFTIPYWDWRD
AEKCDICTDEYMGGQHPTNPNLLSPASFFSSWQIVCSRLEEYNSHQSLCNGTPEGPLRRN
PGNHDKSRTPRLPSSADVEFCLSLTQYESGSMDKAANFSFRNTLEALKRAVALGAQRSSS
DNGQTASSSGSLTPCSLTGRHYPVEADSCLIQAGAPLGRSFQRKDRAAIFAVLQAPLVIP
RQTGSGADLKQTPTDLQLRGLSVTRKTN

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_2|1347_bp
atgctcctggctgttttgtactgcctgctgtggagtttccagacctccgctggccatttc
cctagagcctgtgtctcctctaagaacctgatggagaaggaatgctgtccaccgtggagc
ggggacaggagtccctgtggccagctttcaggcagaggttcctgtcagaatatccttctg
tccaatgcaccacttgggcctcaatttcccttcacaggggtggatgaccgggagtcgtgg
ccttccgtcttttataataggacctgccagtgctctggcaacttcatgggattcaactgt
ggaaactgcaagtttggcttttggggaccaaactgcacagagagacgactcttggtgaga
agaaacatcttcgatttgagtgccccagagaaggacaaattttttgcctacctcacttta
gcaaagcataccatcagctcagactatgtcatccccatagggacctatggccaaatgaaa
aatggatcaacacccatgtttaacgacatcaatatttatgacctctttgtctggatgcat
tattatgtgtcaatggatgcactgcttgggggatctgaaatctggagagacattgatttt
gcccatgaagcaccagcttttctgccttggcatagactcttcttgttgcggtgggaacaa
gaaatccagaagctgacaggagatgaaaacttcactattccatattgggactggcgggat
gcagaaaagtgtgacatttgcacagatgagtacatgggaggtcagcaccccacaaatcct
aacttactcagcccagcatcattcttctcctcttggcagattgtctgtagccgattggag
gagtacaacagccatcagtctttatgcaatggaacgcccgagggacctttacggcgtaat
cctggaaaccatgacaaatccagaaccccaaggctcccctcttcagctgatgtagaattt
tgcctgagtttgacccaatatgaatctggttccatggataaagctgccaatttcagcttt
agaaatacactggaagctctgaagagagcagtggctcttggagcacagcgttcgagctcc
gataatggacagacggcctcctcaagtgggtccctgaccccgtgtagcctgactgggaga
cactacccagtagaggccgacagctgcctcatacaggcaggtgcccctctgggacgaagc
ttccagaggaaggatcgggcagcaatatttgctgttctgcaggctccattggtgataccc
aggcaaacagggtctggagcggacctcaagcaaactccaacagacctgcagctcaggggc
ctgtctgttacaaggaaaactaactaa

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_3|166_aa
MEYYKKEQNDVLRSIVDVAVGHNLKRLANLAAQKQSNQKGGSKKGPWGFRNEQQIASLLV
TARLKLAQKGRNLRVMGVVFLSSGSEGTVLFKKFIQKPMHPLDITGNPTWFLLYHCTEMV
ISLFHPKIWAMTIAIYKIQCPNGYFLLQRQQNFLDEPGEKRLNESY

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_3|501_bp
atggaatactataagaaagaacaaaatgatgtccttcgcagcatcgtggatgtagctgta
ggccataatctgaaacgccttgccaacttggcagcccagaaacagtccaaccagaagggc
ggcagtaagaaaggtccctggggcttcaggaatgaacagcagattgcttccctgctggtg
actgcaaggctgaagcttgctcagaaaggcagaaatctcagggttatgggggtagtattt
ttgagcagtggctccgaaggcaccgtcctcttcaagaagtttatccagaagccaatgcac
ccattggacataaccgggaatcctacatggttccttttataccactgtacagaaatggtg
atttctttatttcatccaaagatctgggctatgactatagctatctacaagattcagtgt
cccaatggatactttttactacaaaggcaacaaaatttcctggatgagccaggggagaag
aggctcaatgagtcatattag

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_4|1119_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFISAPHHTYS
KIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDCWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKGKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAEVKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQTDTIKNDKGDITTDPTETQTTIREYYKHLYANKLENVEEMDKFLDTYTLPRLN
QEEVESLNRPITGVEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKE
GILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHD
QVGFIPGMQGWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLVL
EVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYK
INVQKPQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEI
KEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQK
RARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHTY
NYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWINDLNVRPK
TIKTLEENLGITIQDIGMGKGFMSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIRVNRQ
PTTWEKIFTTYSSDKGLISRIYNELKQIYKKKTNNPIKKWARDMNRHFSKEDIYAAKKHM
KKCSSSLAIREMQIKTTMRYHLTPLRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKVVQP
LWKSVWRFLRDLELEIPFDPAIPLLGIYPNDYKSCCYKDTCTQNLDCPELIETFLNSKKP
GKKKLQKERKSLSDNESNDSKSKKRDAADKPRGFTRDLDPERIIGATGSSGEWMFLLKWE
YSHQADLLLAKAANMKCLEIVIVFYKERLSWHSCPDDEA

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_4|3360_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttatttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaagccgctcaactacatggaaactgaacaacctgctcctgaatgactgctgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggatgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagggaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaagtgaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccactagcaagactaataaag
aaaaaaagagagaagaatcaaacagacacaataaaaaatgataaaggggatatcaccacc
gatcccacagaaacacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatgtagaagaaatggataaattcctggacacatacactctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggagttgaaattgtggcaataatc
aatagtttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcattctgataccaaagccgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgta
atccagcatataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaa
aaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattagtgttg
gaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaattaggaaaa
gaggaagtcaaattgtccctgtttgcagacgacatgattgtttatctagaaaaccccatt
gtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtacaaaaaccacaagcattcctatacaccaacaacagacaaacagagagccaa
atcatgagtgaactcccattcacaattgcttccaagagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaata
aaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatata
gtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagcta
ccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacacta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatagatcaatggaacagaacagagccctcagaaataatgccgcatacctac
aactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaatgatttaaacgttagacctaaa
accataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaag
ggcttcatgtccaaaacaccaaaagcaatggcaaccaaagacaaaattgacaaatgggat
ctcattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaa
cctacaacatgggagaaaattttcacaacctactcatctgacaaagggctaatatccaga
atctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgg
gcaagggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatg
aaaaaatgctcatcatcgctggccatcagagaaatgcaaatcaaaaccactatgagatat
catctcacaccacttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggaga
ggatgtggagaaataggaacacttttacactgttggtgggactgtaaagtagttcaacca
ttgtggaagtcagtgtggcgatttctcagggatctagaactagaaataccatttgaccca
gccatcccattactgggtatatacccaaatgactataaatcatgctgctataaagacaca
tgcacacaaaatttagattgtccagagttaattgaaacattccttaattctaaaaaacct
ggtaaaaaaaaattacaaaaagaaagaaagtctttatctgacaatgaatctaatgacagc
aaatcaaagaaaagagatgctgccgacaaaccaagaggcttcaccagagatcttgatcct
gaaagaataattggtgccacaggcagcagtggagaatggatgtttctcctgaaatgggaa
tattcacatcaggccgacttgctgctggcaaaagcggcaaatatgaagtgtcttgaaatt
gtaattgttttttacaaagagagactaagttggcattcttgtccagatgatgaagcttaa

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_5|197_aa
MGKKQNRKTANSKTQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDLQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCYQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDAENGTKLENPLQD
IIQENFPNLARQANVQI

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_5|594_bp
atggggaaaaaacagaacagaaaaactgcaaactctaaaacgcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgattttgat
gagctgagagaggaaggcttcagacgatcaaattactctgagctacgggaggaccttcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgctatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatgcggagaatggaaccaagttggaaaaccctctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaatgttcagatttag

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_6|83_aa
MIPEKREENKLSTVTLFAYCLEAICWLQQTGETPAKIGDYTEETKNGVTLRPKQLEFVEQ
NMEGKGDPQKDASEIGRGESSSL

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_6|252_bp
atgatccctgagaaaagggaagaaaacaagctaagcaccgtcactctctttgcttattgc
ctggaggcaatctgctggctgcagcagacaggggaaactccagcaaagattggtgactac
actgaggagacaaagaacggagttacattaaggcccaaacagctggaatttgtggagcag
aatatggaagggaagggagatccacagaaagacgcctcggagattggtagaggagaatcc
tcaagtctttga

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_7|208_aa
MSLGRCKGKVWRWYILLRITEGIGDQQEESKRREGRKGSTVYSRERIRQYDGSGKNPGLL
YIDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLKMSYHSYALLCPFPLLKVIRL
HPSFSMSSSAFWQENRPDYVNIQLYLSQTDGIQKIIGEKYHALNSRLFIGRPRWKLLFDE
IAKYNRGNCFRLLVPELDSLDQHQLESC

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_7|627_bp
atgtcattaggaagatgcaaaggaaaggtctggcgatggtacatattgctgcgaattact
gagggcattggagaccagcaagaagaaagtaaaaggagggaggggagaaaagggagtact
gtatattctcgggagagaataaggcagtatgacggcagtggaaagaaccctggactgctg
tatattgatggtccttttggaagtccatttgaggaatcactgaactatgaggtcagcctc
tgcgtggctggaggcattggagtaactccatttgcatcaatactcaacaccctgttaaag
atgtcatatcacagttatgcactcctctgtccttttcctctgttaaaagtcattcgcctc
catccttcattttctatgtcctcatcagcgttttggcaagagaacagacctgactatgtc
aacatccagctgtacctcagtcaaacagatgggatacagaagataattggagaaaaatat
catgcactgaattcaagactgtttataggacgtcctcggtggaaacttttgtttgatgaa
atagcaaaatataacagaggtaattgctttaggttgttggttcctgaactggattccttg
gaccagcatcaattggaatcttgttag

>gi568815587f:89077954_89395363|GENSCAN_predicted_peptide_8|107_aa
MQGSSIINASLIKTLLKATLLPKEAGVIHCKGHQKASDPIPQGNAYAVKGFFRPPPFPTS
QAREFAPDQDWQIDFTHMTRVRKLKYLLVWVDTFIGWIEAFPTGSEK

>gi568815587f:89077954_89395363|GENSCAN_predicted_CDS_8|321_bp
atgcaaggttcctccatcattaatgcctctttaataaaaacacttctcaaggccacttta
cttccaaaggaagctggagtcattcactgcaagggtcatcaaaaggcatcagatcccatc
cctcagggtaatgcttatgctgttaagggatttttcaggccccctcccttccctacaagt
caagctcgagaatttgcccctgaccaggactggcaaattgactttactcacatgacccga
gtcaggaaactaaaatacctcttggtctgggtagacactttcattggatggatagaggcc
tttcccacagggtctgagaag