GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:04:17

Sequence gi568815587r:77519631_77737714 : 218084 bp : 40.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    916   1126  211  0  1   77   44   147 0.136   8.19
 1.02 Intr +  21934  22025   92  2  2   81   66    55 0.013   1.39
 1.03 Intr +  31943  32131  189  1  0   99   33   101 0.800   4.56
 1.04 Intr +  32770  32848   79  0  1   78  110   119 0.522  11.31
 1.05 Term +  34584  34741  158  1  2   98   49   127 0.994   6.91
 1.06 PlyA +  34885  34890    6                               1.05

 2.00 Prom +  36686  36725   40                              -5.45
 2.01 Init +  40067  40225  159  1  0   77   57   100 0.476   5.67
 2.02 Intr +  41178  41319  142  2  1   51   86    78 0.513   2.91
 2.03 Intr +  48134  48186   53  0  2   65   85    24 0.369  -2.49
 2.04 Intr +  48763  49173  411  0  0   73   40   261 0.063  13.26
 2.05 Intr +  49348  49372   25  0  1   94   61    21 0.061  -3.32
 2.06 Intr +  51885  52055  171  1  0   85   91    91 0.075   8.09
 2.07 Intr +  53237  53485  249  0  0  -16   19   229 0.060   2.09
 2.08 Term +  54587  54762  176  0  2   58   45   168 0.524   6.44
 2.09 PlyA +  55292  55297    6                               1.05

 3.00 Prom +  56231  56270   40                              -1.75
 3.01 Init +  70363  71036  674  0  2   90   87   515 0.565  44.30
 3.02 Intr +  86053  86143   91  1  1   55   96    43 0.070   0.88
 3.03 Term +  92081  92194  114  1  0  118   48    62 0.673   2.79
 3.04 PlyA +  92940  92945    6                               1.05

 4.09 PlyA -  96544  96539    6                               1.05
 4.08 Term - 100065  99998   68  1  2   45   48   112 0.544   0.02
 4.07 Intr - 103043 102870  174  0  0   64  113   109 0.987   9.99
 4.06 Intr - 105440 105333  108  0  0   23   49   173 0.979   6.24
 4.05 Intr - 106188 106087  102  1  0   61   67   181 0.992  12.53
 4.04 Intr - 110269 110133  137  0  2   67   95    82 0.653   6.09
 4.03 Intr - 118110 117960  151  1  1   72   75   159 0.609  11.30
 4.02 Intr - 121788 121665  124  0  1   26   93    53 0.082  -1.16
 4.01 Init - 137116 136877  240  1  0   44   98   169 0.529  11.42
 4.00 Prom - 146351 146312   40                              -6.95

 5.09 PlyA - 146619 146614    6                               1.05
 5.08 Term - 147861 147287  575  1  2   51   47   887 0.989  74.53
 5.07 Intr - 152600 152412  189  0  0   63  116   264 0.992  25.34
 5.06 Intr - 155626 155406  221  0  2   61   58   279 0.978  19.22
 5.05 Intr - 157369 157162  208  2  1   59   57   398 0.988  31.01
 5.04 Intr - 158523 158456   68  2  2   70   87   186 0.999  14.33
 5.03 Intr - 171608 171529   80  2  2  104   63   111 0.984   7.63
 5.02 Intr - 179063 178857  207  2  0   34   41   293 0.728  17.55
 5.01 Init - 182842 181091 1752  1  0   63   93  1736 0.480 161.63
 5.00 Prom - 200588 200549   40                              -6.35

 6.02 PlyA - 201517 201512    6                               1.05
 6.01 Sngl - 215396 214845  552  2  0  109   46   634 0.936  57.16

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  29275  29295   21  0  0   83  105    22 0.835   3.15


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_1|242_aa
MSGFWVPYPKPNPKPTSLRFGNAVWRMHPRGVSRTMETQLPVSEERTEEEKGKRRQFFEE
VPGLQDTFERGLQTQTELTTCSPGSSARRQHIMGLLSLYNCAAPRQAKPDLNSSSASAPP
PYNPSITSPPHTRSGLQFRSVASPPLPAQQFPLTEVAGAEGIVKLRTDAAQSPRKPPGPS
QTLQVTATVEGHTWFIDGSSSRPSHQSPVKAGYAIVSSTSIIESMALPASTTSQQAELIA
LT

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_1|729_bp
atgtcaggcttctgggttccctaccccaagcccaatcctaagccaaccagtttaaggttt
gggaatgcagtttggaggatgcatccgagaggagtgtcccgtactatggagacacaatta
cctgtaagtgaagagaggacagaggaggaaaaaggaaaaagaaggcagtttttcgaagaa
gtcccagggcttcaggatacatttgaaaggggccttcaaactcagactgaattaaccacc
tgctctcctggttcttcagctcgaagacagcatatcatgggccttctcagcctctataat
tgcgctgctcctcgccaggccaagccagatctcaattcttcctcagcctctgctcctcca
ccctataatccttctatcacctcccctcctcacacccggtccggcttacagtttcgttcc
gtggctagccctcccctacctgcccaacaatttcctcttacagaggtggctggagctgaa
ggcatagtcaagctgaggactgacgctgcccaatcgcctcgcaagcctcctggaccatca
cagacacttcaggtaactgctacagtggagggccacacttggtttattgatggtagttcc
tccaggcccagtcaccaatcaccagtaaaggcaggctatgctatagtgtcttccacatct
atcattgagtctatggccctgcccgcttccactacctctcaacaagctgaactcattgcc
ttaacttga

>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_2|461_aa
MPAPTCCDNQNCLQTMPNAPRGGGVEGGANLLPPPSTENYFPGVCKALGQCVWYQWNPSL
SSAGRIDEWPICTRVLWIGGVTVYTGKSQWTGPHMQPKPKVLLRDSRDWWLVLYLDHSGG
KVPLALGVSKDATGSQSLEPGTLEILSTAAELASKPQNKVLPPLPSPFHKQESLFMATAA
LSPWQVLPGYHQCSLNVQGLFNQLAVNAVRPGTHPSGKRTPLWPRAGPEMPSMSQDLELG
TPRACLVLYPTVAELAVGSLLAQGGWSPGPRETCDPRCRRENFSPEGKSALRDPAPLPSS
ATDPERSYRMILETAHFRNHVALVGISTIKVYGFGATGWMVTMARFTACKSCTGIYSSDL
GPSSGFHTGKSGVFRGTGIGLRSHIYRAVLNVCRHPVQPFGELGVVHWIHHSRLKLTTQD
KWTSQQDPDHPTRLILRRDQTAAEDDRPVLVTPEANQPTHG

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_2|1386_bp
atgcccgctcccacctgctgtgacaatcaaaactgtctacagacaatgccaaatgcccca
aggggtggtggggtggaggggggtgcaaacttgctgccaccaccttccacagaaaactat
ttccctggagtgtgcaaggccctgggccagtgtgtgtggtatcagtggaacccttccctt
tcatcagcaggcagaatagatgagtggcccatctgcacaagagtgctctggataggaggt
gtcacagtgtacacaggcaagagtcagtggacaggcccacacatgcagcccaagccaaaa
gttttgctaagagacagccgggactggtggctggtgctttatttagatcattcgggtggt
aaggtccccctggccctgggtgtgtccaaagatgccactgggagccagagtctggagcca
ggaaccttagaaatcttatctactgctgctgagctggcatccaagccacaaaacaaagtc
cttccccctcttccctcccctttccacaaacaggagtctctcttcatggctactgctgcc
ctgagcccgtggcaagtactgccaggctaccaccaatgttcactcaacgtccaagggctc
ttcaatcagcttgcggtgaatgctgtgaggcccgggactcacccttcagggaaaaggact
cccctctggcccagggcaggtccagaaatgccatccatgagccaagacctggaactgggg
acaccaagagcctgcttggtgctctatcccactgtggctgagctggcagttggttccctt
ctggcccaggggggctggagccctgggccaagggagacctgtgaccccaggtgccgccgg
gagaacttcagcccagaggggaaatcagctctccgtgacccagcacccctacccagcagc
gcaacagatcctgagaggagctacaggatgattctagaaacagcgcacttcaggaatcat
gtggcacttgttggaataagtaccattaaagtatatggatttggtgccacgggatggatg
gtcaccatggcccggtttacggcatgcaaatcttgcaccggtatctactcatcagacctt
ggtcccagcagcggctttcatactggcaaaagtggagtattccgggggactggcatcgga
ttaagatcccatatttatagagccgttctaaatgtttgcagacaccctgtacagcctttt
ggggaactgggtgttgtgcattggatccaccacagtcggctgaaactgacaactcaagac
aagtggaccagccagcaggacccagatcatccaactcggctgatcctgagacgggaccaa
actgctgccgaagacgaccgccctgttctggtcactccggaggctaaccagcctacgcat
ggctga

>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_3|292_aa
MSPLLGLRSELQDTCTSLGLMLSVVLLMGLARVVARQQLHRPVAHAFVLEFLATFQLCCC
THELQLLSEQHPAHPTWTLTLVYFFSLVHGLTLVGTSSNPCGVMMQMMLGGMSPETGAVR
LLAQLVSALCSRYCTSALWSLGLTQYHVSERSFACKNPIRVDLLKAVITEAVCSFLFHSA
LLHFQEVRTKLRIHLLAALITFLVYAGLSFSPNTWHFQSLYDMRLKPVPGAKKVEDLCVK
ELFHPLLERTLKSSQILVPVSLSTITTVILLGDRYKDDPSSCTALEFTGSLL

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_3|879_bp
atgtcgccgctgctggggctccggtccgagctgcaggacacctgcacctcgctgggactg
atgctgtcggtggtgctgctcatggggctggcccgcgtagtcgcccggcagcagctgcac
aggccggtggcccacgccttcgtcctggagtttctagccaccttccagctctgctgctgc
acccacgagctgcaactgctgagcgaacagcaccccgcgcaccccacctggacgctgacg
ctcgtctacttcttctcgcttgtgcatggcctgactctggtgggcacgtccagcaacccg
tgcggcgtgatgatgcagatgatgctggggggcatgtcccccgagacgggtgcggtgagg
ctattggctcagctggttagtgccctgtgcagcaggtactgcacaagcgccttgtggagc
ttgggtctgacccagtatcacgtcagcgagaggagcttcgcttgcaagaatcccatccga
gtcgacttgctcaaagcggtcatcacagaggccgtctgctcctttctcttccacagcgct
ctgctgcacttccaggaagtccgaaccaagcttcgtatccacctgctggctgcactcatc
acctttttggtctatgcaggtttgtcattctcaccaaatacttggcacttccagagcctc
tatgacatgaggctgaaaccggtccctggtgctaaaaaggttgaggatctctgtgttaag
gaattatttcatccattacttgaaagaacattaaaaagtagccagatcttagttcctgtc
tcactctctaccatcaccacagttatacttcttggtgacagatacaaagatgatccttcc
agctgcacggccttggagttcactggatctctcctttga

>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_4|367_aa
MKVHSTVWKLEKQRLKGPDTESSQVQVPPRGFPLATSCSPHVNEVVALNRSDWLWKATNQ
RLKWRVQRSLSSFCNQSEAKKKKKKELRELKTLICGALKSERELTRNPSCCDRSKDTVDS
AGPVLPHSAAMSFLKSFPPPGPAEGLLRQQPDTEAVLNGKGLGTGTLYIAESRLSWLDGS
GLGFSLEYPTISLHALSRDRSDCLGEHLYVMVNAKFEEESKEPVADEEEEDSDDDVEPIT
EFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSDDYDGEEYDVEAHEQGQGDIPTFYTY
EEGLSHLTAEGQATLERLEGMLSQSVSSQYNMAGVRTEDSIRDYEDGMEVDTTPTVAGQF
EDADVDH

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_4|1104_bp
atgaaagtacactccacagtgtggaagctggagaagcagcgactcaagggcccggataca
gaatcttctcaggtccaagtaccccctagaggttttccattggccacttcctgctcacct
catgtaaatgaagtggtagctctcaatcggtctgattggttgtggaaagcaaccaatcaa
agactgaagtggagggtacaacgctcactctcctctttttgcaaccaatcagaggctaag
aaaaaaaaaaaaaaggaactcagagagctcaaaacactaatctgtggagctctgaaatct
gagagagaacttaccaggaaccccagctgctgtgacagatcaaaggacacagtggattct
gcagggcctgtgttgccgcactctgctgctatgagcttcctcaaaagtttcccgccgcct
gggccagcggaggggctcctgcggcagcagccagacactgaggctgtgctgaacgggaag
ggcctcggcactggtaccctttacatcgctgagagccgcctgtcttggttagatggctct
ggattaggattctcactggaataccccaccattagtttacatgcattatccagggaccga
agtgactgtctaggagagcatttgtatgttatggtgaatgccaaatttgaagaagaatca
aaagaacctgttgctgatgaagaagaggaagacagtgatgatgatgttgaacctattact
gaatttagatttgtgcctagtgataaatcagcgttggaggcaatgttcactgcaatgtgc
gaatgccaggccttgcatccagatcctgaggatgaggattcagatgactacgatggagaa
gaatatgatgtggaagcacatgaacaaggacagggggacatccctacattttacacctat
gaagaaggattatcccatctaacagcagaaggccaagccacactggagagattagaagga
atgctttctcagtctgtgagcagccagtataatatggctggggtcaggacagaagattca
ataagagattatgaagatgggatggaggtggataccacaccaacagttgctggacagttt
gaggatgcagatgttgatcactga

>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_5|1099_aa
MKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEKPLPENEEKKIIKEES
DSFKENVKPIKVEVKECRADPKDTKSSMEKPVAQEPERIEFGGNIKSSHEITEKSTEETE
KLKNDQQAKIPLKKREIKLSDDFDSPVKGPLCKSVTPTKEFLKDEIKQEEETCKRISTIT
ALGHEGKQLVNGEVSDERVAPNFKTEPIETKFYETKEESYSPSKDRNIITEGNGTESLNS
VITSMKTGELEKETAPLRKDADSSISVLEIHSQKAQIEEPDPPEMETSLDSSEMAKDLSS
KTALSSTESCTMKGEEKSPKTKKDKRPPILECLEKLEKSKKTFLDKDAQRLSPIPEEVPK
STLESEKPGSPEAAETSPPSNIIDHCEKLASEKEVVECQSTSTVGGQSVKKVDLETLKED
SEFTKVEMDNLDNAQTSGIEEPSETKGSMQKSKFKYKLVPEEETTASENTEITSERQKEG
IKLTIRISSRKKKPDSPPKVLEPENKQEKTEKEEEKTNVGRTLRRSPRISRPTAKVAEIR
DQKADKKRGEGEDEVEEESTALQKTDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRG
RWKYSSNDESEGSGSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELKLLCEKL
EEQLQDLDVALKKKERAERRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKD
ISTILDEERKENKRPQRAAAARRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVS
DENPDESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRRLRRKTPKKKYSDDDEEEESEE
NSRDSESDFSDDFSDDFVETRRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKR
RLSSSESEESYLSKNSEDDELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPSRKRLHR
IETDEEESCDNAHGDANQPARDSQPRVLPSEQESTKKPYRIESDEEEDFENVGKVGSPLD
YSLVDLPSTNGQSPGKAIENLIGKPTEKSQTPKDNSTASASLASNGTSGGQEAGAPEEEE
DELLRVTDLVDYVCNSEQL

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_5|3300_bp
atgaaaagtgaggagcagcctatggatttagaaaaccgttctacagccaatgttctagaa
gagactactgtgaaaaaagaaaaagaagatgaaaaggaacttgtgaaactgccagtcata
gtgaagctagaaaaacctttgccagaaaatgaagaaaaaaagattatcaaagaagaaagt
gattccttcaaggaaaatgtcaaacccattaaagttgaggtgaaggaatgtagagcagat
cctaaagataccaaaagtagcatggagaagccagtggcacaggagcctgaaaggatcgaa
tttggtggcaatattaaatcttctcacgaaattactgagaaatctactgaagaaactgag
aaacttaaaaatgaccagcaggccaagataccactaaaaaaacgagaaattaaactgagt
gatgattttgacagtccagtcaagggacctttgtgtaaatcagttactccaacaaaagag
tttttgaaagatgaaataaaacaagaggaagagacttgtaaaaggatctctacaatcact
gctttgggtcatgaagggaaacagctggtaaatggagaagttagtgatgaaagggtagct
ccaaattttaagacagaaccaatagagacaaagttttatgagacaaaggaagagagctat
agcccctctaaggacagaaatatcatcacggagggaaatggaacagagtccttaaattct
gtcataacaagtatgaaaacaggtgagcttgagaaagaaacagcccctttgaggaaagat
gcagatagttcaatatcagtcttagagatccatagtcaaaaagcacaaatagaggaaccc
gatcctccagaaatggaaacttctcttgattcttctgagatggcaaaagatctctcttca
aaaactgctttatcttccaccgagtcgtgtaccatgaaaggtgaagagaagtctcccaaa
actaagaaggataagcgcccaccaatcctagaatgtcttgaaaagttagagaagtccaaa
aagacttttcttgataaggacgcacaaagattgagtccaataccagaagaagttccaaag
agtactctagagtcagaaaagcctggctctcctgaggcagctgaaacttctccaccatct
aatatcattgaccactgtgagaaactagcctcagaaaaagaagtggtagaatgccagagt
acaagtactgttggtggccagtctgtgaaaaaagtagacctagaaaccctaaaagaggat
tctgagttcacaaaggtagaaatggataatctggacaatgcccagacctctggcatagag
gagccttctgagacaaagggttctatgcaaaaaagcaaattcaaatataagttggttcct
gaagaagaaaccactgcctcagaaaatacagagataacctctgaaaggcagaaagagggc
atcaaattaacaatcaggatatcaagtcggaaaaagaagcccgattctccccccaaagtt
ctagaaccagaaaacaagcaagagaagacagaaaaggaagaggagaaaacaaatgtgggt
cgtactttaagaagatctccaagaatatctagacccactgcaaaagtggctgagatcaga
gatcagaaagctgataaaaaaagaggggaaggagaagatgaggtggaagaagagtcaaca
gctttgcaaaaaactgacaaaaaggaaattttgaaaaaatcagagaaagatacaaattct
aaagtaagcaaggtaaaacccaaaggcaaagttcgatggactggttctcggacacgtggc
agatggaaatattccagcaatgatgaaagtgaagggtctggcagtgaaaaatcatctgca
gcttcagaagaggaggaagaaaaggaaagtgaagaagccatcctagcagatgatgatgaa
ccatgcaaaaaatgtggccttccaaaccatcctgagctaaaactgctctgtgaaaaatta
gaggaacagttgcaggatttggatgttgccttaaagaagaaagagcgtgccgaacgaaga
tttgatgagtttgatgaagcaattgatgaagctattgaagatgacatcaaagaagccgat
ggaggaggagttggccgaggaaaagatatctccaccatcacaggtcatcgtgggaaagac
atctctactattttggatgaagaaagaaaagaaaataaacgaccccagagggcagctgct
gctcgaaggaagaaacgccggcgattaaatgatctggacagtgatagcaacctggatgaa
gaagagagcgaggatgaattcaagatcagtgatggatctcaagatgagtttgttgtgtct
gatgaaaacccagatgaaagtgaagaagatccgccatctaatgatgacagtgacactgac
ttttgtagccgtagactgaggcgacacccctctcggccaatgaggcagagcaggcgtttg
cgaagaaagaccccaaagaaaaaatattccgatgatgatgaagaggaggaatctgaggag
aatagtagagactctgaaagtgacttcagtgatgattttagtgatgattttgtagaaact
cggcgaaggcggtcaaggagaaatcagaaaagacaaattaactacaaagaagactcagaa
agtgacggttcccagaagagtttgcgacgtggtaaagaaataaggcgagtacacaagcga
agactttccagctcagagagtgaagagagctatttgtccaagaactctgaagatgatgag
ctagctaaagaatcaaagcggtcagttcgaaagcggggccgaagcacagacgagtattca
gaagcagatgaggaggaggaggaagaggaaggcaaaccatcccgcaaacggctacaccgg
attgagacggatgaggaggagagttgtgacaatgctcatggagatgcaaatcagcctgcc
cgtgacagccagcctagggtcctgccctcagaacaagagagcaccaagaagccctaccgg
atagaaagtgatgaggaagaggactttgaaaatgtaggcaaagtggggagcccattggac
tatagcttagtggacttaccttcaaccaatggacagagccctggcaaagccattgagaac
ttgattggcaagcctactgagaagtctcagacccccaaggacaacagcacagccagtgca
agcctagcctccaatgggacaagtggtgggcaggaggcaggagcaccagaagaggaggaa
gatgagcttttgagagtgactgaccttgttgattatgtctgtaacagtgaacagttataa

>gi568815587r:77519631_77737714|GENSCAN_predicted_peptide_6|183_aa
MRTTSTSQVRQNYHQDSEAAINRQINLELCASYVYLSMSYCFDRDDVALKNFAKYFLHQS
HEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNVMECALHLEKNVNQSLLELHK
LATDKNDPHLCDFIETHYLNEQVKAIKELDDHVTNLHKMGALESGLAEYLFDKHTLGDSD
NES

>gi568815587r:77519631_77737714|GENSCAN_predicted_CDS_6|552_bp
atgaggaccacgtccacctcacaggtgcgccagaactaccaccaggactcagaggccgcc
atcaaccgccagatcaacctagagctctgtgcctcctacgtttacctgtccatgtcttac
tgctttgaccgtgatgatgtggctttgaagaactttgccaaatactttcttcaccaatct
catgaggagagggagcatgctgagaaactgatgaagctgcagaaccaacgaggtggccga
atcttccttcaggatatcaaaaaaccagactgtgatgactgggagagcgggctgaatgtg
atggagtgtgcattacatttggaaaaaaatgtgaatcagtcactactggaactgcacaaa
ttggccactgacaaaaatgacccccatttgtgtgacttcattgagacacattacctgaat
gagcaggtgaaagccatcaaagaattggatgaccatgtgaccaacttgcacaagatggga
gcactcgaatctggcttggcagaatatctctttgacaagcacaccctgggagacagtgat
aatgaaagctaa