GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:12:20

Sequence gi568815587r:32289061_32535344 : 246284 bp : 44.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1696   1691    6                               1.05
 1.05 Term -  12526  12512   15  1  0  128   42     2 0.312  -2.16
 1.04 Intr -  18866  18705  162  2  0   61   68    94 0.462   4.87
 1.03 Intr -  22793  22687  107  0  2   68   60    73 0.486   2.43
 1.02 Intr -  44911  44771  141  2  0   72   98   118 0.702  11.52
 1.01 Init -  80638  80503  136  1  1   53   57   127 0.703   6.40
 1.00 Prom -  83173  83134   40                              -1.66

 2.00 Prom +  86778  86817   40                              -6.36
 2.01 Init +  90260  90290   31  1  1   83   78    23 0.658   0.71
 2.02 Term +  91065  91309  245  1  2   55   36   193 0.192   6.86
 2.03 PlyA +  91513  91518    6                               1.05

 3.19 PlyA -  91719  91714    6                              -0.45
 3.18 Term -  94292  94180  113  0  2   78   55    78 0.239   2.22
 3.17 Intr -  97487  97455   33  0  0  116   76     8 0.029   0.59
 3.16 Intr -  97876  97736  141  2  0   74   95    62 0.035   5.82
 3.15 Intr - 103004 102921   84  0  0   57   98    83 0.886   5.99
 3.14 Intr - 103272 103135  138  1  0   73   72    32 0.566   0.54
 3.13 Intr - 103695 103606   90  1  0   55   72    96 0.952   4.67
 3.12 Intr - 107347 107197  151  1  1  117  119    12 0.823   6.94
 3.11 Intr - 110984 110888   97  1  1  112   99    63 0.942   9.81
 3.10 Intr - 126210 126155   56  0  2  132   55    18 0.047   0.68
 3.09 Intr - 127480 127430   51  1  0  125   89     1 0.385   3.00
 3.08 Intr - 132879 132827   53  1  2   52   45    67 0.039  -2.57
 3.07 Intr - 138483 138296  188  2  2   41   50   120 0.671   2.83
 3.06 Intr - 138998 138896  103  0  1  139   91   189 0.997  23.53
 3.05 Intr - 139559 139437  123  0  0  127   94   190 0.925  24.06
 3.04 Intr - 146279 145640  640  2  1   93  110   613 0.925  55.63
 3.03 Intr - 148131 148083   49  2  1   71   91    98 0.751   7.08
 3.02 Intr - 149265 149039  227  0  2    2   45   161 0.594  -0.02
 3.01 Init - 152366 152358    9  2  0   74  105    10 0.431   1.24
 3.00 Prom - 152830 152791   40                              -0.76

 4.00 Prom + 153397 153436   40                               0.64
 4.01 Init + 155211 155266   56  2  2   56   71    25 0.377  -1.64
 4.02 Intr + 162961 163071  111  1  0  135   81    94 0.973  12.89
 4.03 Term + 168855 168879   25  0  1  128   38    12 0.313  -2.10
 4.04 PlyA + 169701 169706    6                               1.05

 5.03 PlyA - 170208 170203    6                               1.05
 5.02 Term - 173509 173449   61  0  1  107   43    57 0.097   0.38
 5.01 Init - 203301 202358  944  0  2   86   53   376 0.783  27.02
 5.00 Prom - 205251 205212   40                              -5.76

 6.06 PlyA - 207278 207273    6                               1.05
 6.05 Term - 208632 208527  106  2  1   11   32   109 0.322  -4.52
 6.04 Intr - 208803 208706   98  0  2   48  115   130 0.088  10.51
 6.03 Intr - 219900 219837   64  2  1   38   58    80 0.087  -1.28
 6.02 Intr - 222925 222821  105  0  0   92   92    36 0.076   3.73
 6.01 Init - 235624 234696  929  1  2   75    2   368 0.010  20.26
 6.00 Prom - 239982 239943   40                              -1.76

 7.02 PlyA - 240020 240015    6                               1.05
 7.01 Term - 243063 242830  234  0  0   79   49   157 0.959   7.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  98650  98616   35  1  2   62   49   122 0.837   2.72
S.002 Init - 208758 208706   53  0  2   57  115   115 0.843  11.73


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_1|186_aa
MWESLELPGDLLNGFDQNADNDVDNVIQAEVVSDGNEELVGNWRKGCSAGPLGSKVAGGE
AHSACLGRRVNRDLYPPDPPLPLEAPATPAAEEAIKLHVEKPVRQKEDPLTSSPKPGGRG
NSAFGIDRTFESLDNFDRHDFHHSKENFPTTDNVLFLKAFNSLVLLWVGSDFYRRSRNDV
GIICLF

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_1|561_bp
atgtgggaaagtttggaactccctggagacttgctgaatggctttgaccaaaatgctgat
aatgatgtggacaatgtaatccaggctgaagtagtctcagatggaaatgaggaacttgtt
gggaactggagaaaaggctgcagcgcagggcctctagggtcaaaagttgcgggcggtgaa
gcccacagtgcctgcctgggccgtcgcgtcaatcgcgacttgtacccgccggacccgccc
ctgcccttggaggcgccagcgacgcctgctgcagaggaagctatcaagttgcatgttgaa
aagccagtgaggcagaaagaagatccactgacttcatctcccaagccaggagggagggga
aattcagcatttggcatcgacaggacgtttgaatccttggacaactttgaccgacatgat
ttccaccactccaaggagaattttcctaccacagacaatgtgctgttcctgaaagccttt
aattctttggtgcttttgtgggttggttctgacttctataggagatccaggaatgatgta
ggtattatttgcctgttctag

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_2|91_aa
MAGVNLFGNQRVHPGVYSMVRNSPGVCIPPHGVVKECLQQERECQPYQGIGMPCLNWAIL
PVSWATLIDFQVRGAQEKPRGSPGHVKPDNH

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_2|276_bp
atggctggcgttaacctttttggcaatcaaagagtgcatcctggcgtctacagcatggta
cggaactcgcctggtgtttgcattccgcctcatggagttgtcaaggaatgcttgcagcag
gaaagggagtgccagccttaccagggcattggtatgccctgcctcaactgggccatcttg
ccagtatcctgggccaccctcattgacttccaggtgaggggtgcccaggaaaaaccaaga
ggctccccaggacatgtcaagccagacaaccattag

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_3|781_aa
MGKGGPRELKEVQESAYRPRRVKVLPAFVLGCESWCLAQGAKASVAGMSPLENLRSPAEN
VTHNKEEDREAWSALRLQEVSCAYGMRIPKKCALRDPASTCVPEPASQHTLRSGPGCLQQ
PEQQGVRDPGGIWAKLGAAEASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLG
GGGGCALPVSGAAQWAPVLDFAPPGASAYGSLGGPAPPPAPPPPPPPPPHSFIKQEPSWG
GAEPHEEQCLSAFTVHFSGQFTGTAGACRYGPFGPPPPSQASSGQARMFPNAPYLPSCLE
SQPAIRNQGYSTVTFDGTPSYGHTPSHHAAQFPNHSFKHEDPMGQQGSLGEQQYSVPPPV
YGCHTPTDSCTGSQALLLRTPYSSLGHSLLPTSTLQGFDPWQRFVDVVPSAPATLWGGPP
AGVQDGDRVATGPCGEAALARVGPSSSLYFFQDVTWPASSYVAESCCWELQLSEMDRRAE
QNLITFPKLNSKDRQNMIVNHSTGYESDNHTTPILCGAQYRIHTHGVFRGIQDVRRVPGV
APTLVRSASETSEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSR
SDQLKRHQRRHTAEIFQLVRSWTSVVKEWLFPRQKQVLEDYCAESVILVGPGGLGKSKGV
KPFQCKTCQRKFSRSDHLKTHTRTHTEDSISLEKLRTSMANVSESERARSYNKSTATLIV
STAQGRTEILRRPCILLQYLAILTEALVMLTLGHEGLPDAVGTWRAMEEAVGLQEKEGGV
E

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_3|2346_bp
atggggaagggcgggcctcgcgagctaaaggaggtacaggagagcgcctatcgtccgcgg
cgggtgaaggtgctacctgccttcgtgctaggctgtgagtcctggtgcttagctcagggc
gccaaggccagtgtagctggcatgtcccccttggaaaacctcaggtctcccgcagagaac
gttacccacaacaaagaagaggacagagaggcatggagcgccctgcgactgcaggaggtc
tcctgcgcctacgggatgcgcattcccaagaagtgcgcccttcgagacccggcttccacg
tgtgtcccggagccggcgtctcagcacacgctccgctccgggcctgggtgcctacagcag
ccagagcagcagggagtccgggacccgggcggcatctgggccaagttaggcgccgccgag
gccagcgctgaacgtctccagggccggaggagccgcggggcgtccgggtctgagccgcag
caaatgggctccgacgtgcgggacctgaacgcgctgctgcccgccgtcccctccctgggt
ggcggcggcggctgtgccctgcctgtgagcggcgcggcgcagtgggcgccggtgctggac
tttgcgcccccgggcgcttcggcttacgggtcgttgggcggccccgcgccgccaccggct
ccgccgccacccccgccgccgccgcctcactccttcatcaaacaggagccgagctggggc
ggcgcggagccgcacgaggagcagtgcctgagcgccttcactgtccacttttccggccag
ttcactggcacagccggagcctgtcgctacgggcccttcggtcctcctccgcccagccag
gcgtcatccggccaggccaggatgtttcctaacgcgccctacctgcccagctgcctcgag
agccagcccgctattcgcaatcagggttacagcacggtcaccttcgacgggacgcccagc
tacggtcacacgccctcgcaccatgcggcgcagttccccaaccactcattcaagcatgag
gatcccatgggccagcagggctcgctgggtgagcagcagtactcggtgccgcccccggtc
tatggctgccacacccccaccgacagctgcaccggcagccaggctttgctgctgaggacg
ccctacagcagccttggccacagccttctccccacctcaaccctccagggtttcgacccg
tggcagcgctttgtggacgtcgttcccagcgcccctgctacgctctggggtgggcccccg
gccggggtgcaggacggagatcgggtcgcaacagggccctgcggggaggctgctctggcc
cgcgtgggaccttcttcctctctttacttcttccaagatgttacctggccagccagcagc
tacgtggcagagagttgctgctgggagctccagctcagtgaaatggacagaagggcagag
caaaacttgataaccttccccaagctaaatagcaaggatagacagaacatgattgtgaac
cacagcacagggtacgagagcgataaccacacaacgcccatcctctgcggagcccaatac
agaatacacacgcacggtgtcttcagaggcattcaggatgtgcgacgtgtgcctggagta
gccccgactcttgtacggtcggcatctgagaccagtgagaaacgccccttcatgtgtgct
tacccaggctgcaataagagatattttaagctgtcccacttacagatgcacagcaggaag
cacactggtgagaaaccataccagtgtgacttcaaggactgtgaacgaaggttttctcgt
tcagaccagctcaaaagacaccaaaggagacatacagctgagatcttccagctggtgaga
agctggacctctgtggttaaggaatggttgttcccaagacagaagcaggtccttgaagat
tactgtgcagaatcagtgattcttgttgggcctgggggactggggaaatctaagggtgtg
aaaccattccagtgtaaaacttgtcagcgaaagttctcccggtccgaccacctgaagacc
cacaccaggactcatacagaagacagcatttctctggagaagctcaggacaagcatggca
aacgtcagcgagtcggaaagagccaggtcttacaacaaaagtacagccacattgattgtt
tcaactgcacagggaagaacagagattctcagacgaccctgcatcctcttgcagtatcta
gccatcctcacagaagcattggtgatgctgacacttggccatgaaggattgcctgatgca
gtggggacttggagggccatggaggaggcagttgggctccaggagaaagaaggaggcgtg
gagtga

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_4|63_aa
MQIVTIIEHNAILNFLTAKLCHYFPLAKRYWKWKAKKPDGAIHTRQPLGPEWDEKRIKKH
QKY

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_4|192_bp
atgcagatagttactataattgagcataatgcaattctgaacttcctgacagccaagctc
tgtcactatttcccattggccaaacgctactggaagtggaaggctaagaagcccgatggt
gcaatccatacacgtcagcctctggggccagagtgggatgaaaaaagaataaagaaacat
cagaaatattaa

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_5|334_aa
MAILPKVIYRFNAILIKLPTTFFTELEKTTLKFIWNQKRACIAKSILSQKNKGGGITLPD
FKLYYNATVTKTAWYWYQNRDMDQWNRTEPSEIIPHIYNYLIFDKPDKNKKWGKDSLFNK
WCWENWLAICRKLKLDLFLTPYSKINSRWIKDLNVRAKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMATEVKIDKWDLIKLKSFCTAKETTIRVNRQPTEWENIFAIYSSDKGLISRIY
KEHKQIYKEKTNNPINMWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTRRYYL
TSVRMVIIKKSENNRAQTQDTEKQMFSDSMTSAD

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_5|1005_bp
atggccatactgcccaaggtaatttatagattcaatgccatcctcatcaagctaccaacg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgcattgccaagtcaatcctaagccaaaagaacaaaggtggaggcatcacgctacctgac
ttcaaactatactacaacgctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatggaccaatggaacagaacagagccctcagaaataataccacacatctacaactat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctgtttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatctcttccttaca
ccttattcaaaaattaattcaagatggattaaagacttaaatgttagagctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacagaagtcaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggaaaacatttttgcaatctactcatctgacaaagggctaatatcgagaatctac
aaagaacacaaacaaatttacaaggaaaaaacaaacaaccccatcaacatgtgggcgaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaaggagatactatctc
acatcagttagaatggtgatcattaaaaagtcagaaaacaacagagctcagacacaagac
acagagaagcaaatgttttcggactcgatgacttcagcggattag

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_6|433_aa
MAILPKVIYRFNAILIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRAIDQWNRTEPSKIIPHIYKYLIFDKPDKNKKWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
VSKTPNAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWENIFAIYSSDKGLIPRIY
NELKQIYKEKTNNPINKQAKDINRHFSKEDIYAAKRHMKKCSSSLAVREMQIKTTRRYHL
TPVRMVIIKKLHDARESHMKCSHFPLAYRKHSPFLRLSDNNKQGGLIYEVNLPSTAGEID
SSIEYMKNYDINLTGLEGEWEMNTFYRLLTDNQFKGSTRKKFKTVESFDAKVIVFFAIES
NGKNPNYFCTNLM

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_6|1302_bp
atggccatactgcccaaggtaatttacagattcaatgccatcctcatcaagctaccaatg
accttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gctatagaccaatggaacagaacagagccctcaaaaataataccacacatctacaagtat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaacaaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctgggcaataccattcaggacataggcatgggcaaggacttc
gtgtctaaaacaccgaacgcaatggcgacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggaaaacatttttgcaatctactcatctgacaaagggctaatacccagaatctac
aatgaactcaaacaaatttacaaggaaaaaacaaacaaccccatcaacaagcaggcaaag
gatattaacagacacttctcgaaagaagacatttatgcagccaaaagacacatgaaaaaa
tgctcatcatcactggccgtcagagaaatgcaaatcaaaaccacaaggagataccatctc
acaccagttagaatggtgatcattaaaaagctccacgatgctcgtgaatcccacatgaag
tgttctcatttccctttagcctaccgaaaacacagcccctttctcaggctctcagacaat
aataaacaaggtggattgatttatgaggtgaatttgccatcaactgctggagaaattgat
agcagcatagagtacatgaaaaattatgatataaacctgactggactagaaggggaatgg
gaaatgaacaccttctatcggctgctgacggacaaccagtttaaagggagcacaaggaag
aagtttaaaactgtagaaagttttgatgcaaaagtaattgtgttttttgccattgaaagt
aatggcaaaaaccccaattacttttgcaccaacctaatgtaa

>gi568815587r:32289061_32535344|GENSCAN_predicted_peptide_7|77_aa
NAFDILLQKKRKVLKCPDSKVLVHGFSFHQDNLFQCGGRGPDNSPDTDVGCPLFADPVPK
FLHGEELIIILSDHSSG

>gi568815587r:32289061_32535344|GENSCAN_predicted_CDS_7|234_bp
aatgcttttgacatcctgctgcaaaagaagaggaaagttctgaagtgtcctgattcaaag
gtcctggtccatggtttctccttccaccaggacaacctgttccagtgtggaggcaggggt
ccggacaacagccctgacactgacgtgggatgcccattgtttgcagatcctgttcccaag
tttcttcatggggaagagctgatcataattttatctgatcatagttcaggctga